Array 1 659951-663888 **** Predicted by CRISPRDetect 2.4 *** >NZ_KV808731.1 Actinomyces sp. HMSC075B09 Scaffold1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 659951 29 100.0 32 ............................. TGCTACCCACGTAAAGAAAGCGAGTAACCATG 660012 29 100.0 32 ............................. GGCTCCACCCCGTCAGGCAGTGATTGCGGGGG 660073 29 100.0 32 ............................. TGTGCCAGCTATTTCCCGATGAGTTCCCCGAC 660134 29 100.0 33 ............................. GCAATATTTTCCAACTGTTGCGCCTGCTGGGCC 660196 29 100.0 32 ............................. TCGTCGCTCGCCGCTTACACGGTATTGCCTGA 660257 29 100.0 32 ............................. GCCAGAGCAGAAGCAAGCGGGTATTAAACCGA 660318 29 96.6 32 ............................T GCGAGACCTCGACGGCGTCACCGTCCTCACCG 660379 29 100.0 32 ............................. ATTTGTAGAGGGCATCCTCTACGGCCTGGGTG 660440 29 100.0 32 ............................. ATCAGCGGTATCCAGTCCACCAAGAAAGACAG 660501 29 100.0 32 ............................. GAAGACTTCCTCAACAAGGACCTGAAAGGAGG 660562 29 96.6 32 ............................T CATACAAGTCTTTACCGGCATTCTTAGCGGCG 660623 29 100.0 32 ............................. AGCGAAAAGTACTACATGCCGGCTGCTGGATA 660684 29 100.0 32 ............................. TGCTCGATGAGCATTATCTCGAGAAAGACGCG 660745 29 100.0 32 ............................. GCCCTATCGGCGGCTTCTAGCTCCGTGTTGGT 660806 29 100.0 32 ............................. CCCAAACCCAGACAGTGAAGCCAGATAGGAAG 660867 29 100.0 32 ............................. CTCCACCACGTCACCCACCCGAAATATTTCGC 660928 29 100.0 32 ............................. ACGGGGTTTTGAACCATGCCAATATGAGCATC 660989 29 96.6 32 ............................A CAAGCTGAAAGTTAATGATATTGGCGTTTTGA 661050 29 100.0 32 ............................. AGCTGTGGACAACTCGCTTGGCGCGTCGTCCA 661111 29 100.0 32 ............................. GTGACCGCGCCAACAATGAACGTGACTAAATA 661172 29 100.0 32 ............................. TAGTGGCCGGCGAATTCAACGACATGCTGCGC 661233 29 100.0 32 ............................. GCATAATCGTCATCTGCCCACCCGCGCTAATC 661294 29 100.0 31 ............................. AAGCCATGCAACAGGCTCCAGCCCCGCAGGC 661354 29 96.6 32 ............................G CTACGAACACAATCAACTATGCGCTACTGCTG 661415 29 100.0 32 ............................. AAAGCAATCCACAACCGACTGATCCTCAAGCT 661476 29 100.0 32 ............................. GGCATCTACCGCATGGAAGCGCTAGGTGCTAG 661537 29 100.0 32 ............................. ACACTCATACGCGCCCGTTTCCTCGTCCACCG 661598 29 100.0 32 ............................. TGGCGTGCTTCTAGCCATTGAGCATCAGCTGG 661659 29 100.0 33 ............................. CCACCGTGGAAGACCTCACCAACCAGCTAAAAC 661721 29 100.0 32 ............................. GCCGCGCCCACAACGTTAGCCCGGTAAGTCTG 661782 29 100.0 32 ............................. GCTGATAAGACGCGGTACGCGTTTACAGCCAC 661843 29 100.0 32 ............................. ATCCCCGGTGATGTTGTGGACGCTATTAGGGA 661904 29 100.0 32 ............................. GTAGTCGTCATCAAAGCGGTTTCGGGTTCGCG 661965 29 100.0 32 ............................. GTCAAGCACAAACCCGCCGCGCTTGTTGTTCC 662026 29 100.0 32 ............................. TCGTGGGATTCGCCGGGCTCGTAAAGCTCATC 662087 29 100.0 32 ............................. GAACACGCACCCAATAACGATCGGGTTTGAAG 662148 29 100.0 32 ............................. GCTGCGCCCGCCTATGGTCACGGTGATAGTCA 662209 29 100.0 32 ............................. GGGCATTTTCACATTGATTGCCGCGCCACGAC 662270 29 100.0 32 ............................. CCGTTCTGGGTGAGGATTTTCGCCAACTGGCC 662331 29 100.0 32 ............................. GAATTTGGGGCGGGCGGGCGCGTCTTTGAAGG 662392 29 96.6 32 ............................T GGTCATCTGGACATGGCTCGAGCAGGTGGAAG 662453 29 100.0 32 ............................. GAAGCGAACGCCCAAGGTTTCTCGGTTTCATA 662514 29 100.0 32 ............................. CTTGCTGGTTGAAGTGTTGCCTAACACGATCA 662575 29 100.0 32 ............................. CGGCGACGACACGCACGCCGTAGCCGTCCTAA 662636 29 100.0 32 ............................. ACGCCTTTAGCAGCGTTAAACGCGGGATTGTT 662697 29 96.6 32 ............................T GGGAGGCTAGGCGCGGCGGCGTTGGTAAAGTG 662758 29 100.0 32 ............................. CCGGCGCTAGAGCTTACGCACGAGGTTTACAA 662819 29 96.6 32 ............................T CCGGTGACGTCGCGGCGGCCGGTGCGTCGAAG 662880 29 100.0 32 ............................. GAAGGTCACGTTACTAGCCACACAGCCCGGCC 662941 29 100.0 32 ............................. ATGGCGACGGTGATCATTATGAGCCGATCTTC 663002 29 100.0 32 ............................. TTGCCAAAAGTGGCGAGCAGCCCGCGCAAGCA 663063 29 100.0 32 ............................. ATCAAGCACGAAGCCCCCGCGCCTGTTATTCC 663124 29 100.0 32 ............................. GGGGCGATGCTCACCATGCTCGACCGGCTAGG 663185 29 100.0 32 ............................. GGGGCGATGCTCACCATGCTCGACCGGCTAGG 663246 29 96.6 32 ............................T AAAGCCACGGTGGGCGAACTTAGCGGCATGAG 663307 29 100.0 32 ............................. CGGACTTGATAGGCACCGAGGATGATTATTTC 663368 29 96.6 33 .............C............... AACGGAGTAATAACCCTATGAAACCTATCCGAA 663430 29 89.7 32 ..CC.........C............... AATAATGCAGGATGAGACACTAGCCACGCCAA 663491 29 89.7 32 ..CC.........C............... TGGGTGATCAAAAAAATGAGACGGAACCCTGT 663552 29 89.7 32 ..CC.........C............... GGGCCGGTTTGGCGCGTTAGCCTATCGACTCC 663613 29 86.2 32 ..CC.........C..............T GATTCTGGCGGCGCATGCGATAGAGAATGTTG 663674 29 89.7 32 ..CC.........C............... GAGGGCAACCCGTTCCCTTTTGTTGCGGCCAT 663735 29 96.6 32 ............................G TACTGCTACGACAATCGCGGCAAAACCGGATC 663796 29 86.2 33 ..CC.........C..............A CGAGCAAAGCAAGCTAAGAAAGCTAAGCGCACC 663858 29 89.7 0 ..CC....................T.... | AC [663880] ========== ====== ====== ====== ============================= ================================= ================== 65 29 98.3 32 ATGTTCCCCGCGCATGCGGGGATGACCCC # Left flank : CTGTGGCTGCTGGTACGAACTACGCTGATTTCTAGGGCTTGTCATGATGGTTCTGGTGACAACCGCGGTGTCAACGGGTTTGCGTGGCGAGTTGACGAGGTGGTTGCTTGAAGTGTCGCCAGGAGTTTTTGTAGGAACAGTGTCTTCACGAGTTCGAGATCAGATTTGGGAGTTTACTTGCGAGAATATTGGTAGCGGCAGGGCCACCTTGATCTTTCCTCAAAGGAATGAGCAGCGTTTAGGGATTAAGACGATTGGTGATGCTTGGGAAGCTACTGACTTTGATGGCATGACTCTCATTCGTAGGCCTGACCTGTCGAGCAAGGAAGTTATGGGCGAAGTGACGGATCGTGCGAAGGTGCGCGAGGCTTCGGGATGGTCGATTGCGGGGCGCAGACGTTACTATAAAAACTCGATCGAGCGTCGGCAACGTAAATAAAGTTGGTCAGAAACACGGTTATGATTTAATTAATTCCTTAGGAAATCAACGATTCCTAAGT # Right flank : CCGGAAGAAAACTGGATAAATCAGTCCAACTCATGGGGAGTAGTTCAATGGTCAGGAAATTTCAGAAAAATGGCAACGATTATTCGTCCGGGAGCATCGCCATAACTACATGGAAAAGCGGTTCGTGAGGGGAAGACGACACAGGGTGCACTTCCCCTTGAGAATCAACCAGAATACACGTTAGACCTCCCATAACGGGAACATCTGAGCCGGTATCCAAGTCGAAGAGCTCATACTCGCCGTCAGTATACGTTTGTTCAAGGAGCACGCTTTCAGGTGGGTAGATCCCGTTGTCGATTTCCTTATCAAGCCATTTTTGTGCAGCGTCGCGACGTGACATGCTTTTCCTCCCTGGTTCCAGTGCGGATACCGCTTCTAGAATGTCGTGCGTTAGTGCTTTATTGTCAAGGCGCGCATAACTCAGGCCTACTTCTTTTGGCCTCGCTCAAGAATTGGTTCACGGGTATTTTCTTGCCTACCTGGCCGTCCGAAACGCCCCC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCCGCGCATGCGGGGATGACCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCATGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //