Array 1 18231-17934 **** Predicted by CRISPRDetect 2.4 *** >NZ_VEGZ01000006.1 Bacillus sp. WP8 strain DE0077 NODE_6_length_289716_cov_24.232234, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 18230 32 96.9 35 ...........C.................... ATATGGATAGACCCATTCCCCTGTGTAATCGTCTA 18163 32 100.0 33 ................................ CCAATCCACATCATATTAGCCCAAATTTGAGTT 18098 32 100.0 34 ................................ ACTTGTGGGAGTGAACCTTTTTATTTTGCATTCA 18032 32 100.0 34 ................................ ATATCTCCGGCAGCATCAAAAAATGAAAATCCTT 17966 32 78.1 0 ...........C.......AA.A....C.C.G | C [17939] ========== ====== ====== ====== ================================ =================================== ================== 5 32 95.0 34 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : GCCAGAGACGGTAGGAGAAGCATTCAAAGTGGATGTGATGACACCACATCATTCAGACTACAACAGTGTCAAGCTAGATAAGATGAACAAAGGGGGAAGTGTTCCAGCCCCTCGAGACGATGACTCACCAACACCGATTCATTTCTTAACGGTGGTCAACGGCCGCTTTCAACTTCTATTGAAAACAAAAAAGAATCGACCAGAAGAAGCGGAATGGCTCGAGCTCGCCAAAACCATCTTACTAGGAGCTTTAGAACACGAAGGAATCGGTGCTAAAACAAATGCAGGCTATGGAAGACTTAAAATGGATGACGTCATTTCATAAGACTAAGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGCACCGTTTCATTCGACAAAAATGAGAAAAAATGTATATTTTTTAGGGGTGAAAACAAAGTTCTATATAGAAACTTAAGGGTTTTGACGAGCATTTCCTGAAAAATGTTATAATTAGGGCGAAAATCGCA # Right flank : TTTCTTAAATTCAAGTACCTATCCAGTTCAAAATCTACACAAATGATTAATCAAAATAATGTACTTTTCCCCTAAATCCAAGCCTACACAACAAAAAAAGACTCGCTCACACAGAGCCGAGTCTTAATTTTTTTTGCAGTTTTTCTTCACTGAAAATCCAGCCGGTATAGGAATTTTTGATTTGGTGGTCCATGTCGATATGGCAGATCGCGACAAAAGGATAATGACCTTTGCTGCGGTAGCGTAAATCAATGAACCGCACCTCATAATGATCCTTGTATTTATCCACTTCCCACCGGTAGACAGGGGAGAAGGAGAGAAAGGCTGAAATATTTTCATCTTGTTTGGCAATTTTCATAATTTCAGTATCAGGGACCGGCACCCGGTTAAACGTGTCTAAAATGACAACCTCTCCATTCATGCTGCGCCCAACATGGAAAGAGGATTTACATTTCACGGCAATGCGCCATTGTCTGAACTTCATTGTAGGCGAAATAATA # Questionable array : NO Score: 8.81 # Score Detail : 1:0, 2:3, 3:3, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 26946-26650 **** Predicted by CRISPRDetect 2.4 *** >NZ_VEGZ01000006.1 Bacillus sp. WP8 strain DE0077 NODE_6_length_289716_cov_24.232234, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 26945 32 96.9 34 ...........T.................... GAGCTTACGTATCCGCCGATCGCCTTATTGAGCT 26879 32 100.0 34 ................................ GACACCGAACAAGCATTCTGTTAAAATGTTTTTG 26813 32 96.9 33 ...................T............ ATGTATCCAGAAATCATCGACTTTCTAATTTGT 26748 32 100.0 35 ................................ ATCATGGCGCTTATCAGTCGCTCATAGCATAGCCA 26681 32 71.9 0 ..........G.........T.A.C.ATTCT. | ========== ====== ====== ====== ================================ =================================== ================== 5 32 93.1 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : ATGAAAGAAATAGCCGATCAGTTAGGAGAAACAAGACAAAACATCTCAAACATTCACAAAAAAGCGCTCAACAAACTAAAAGAAGAAACAGGGGGAGATGTCCGTGCACGAAGACAAAATGACCAATGGAGAAATGGAAGAACTCATTGAAACCTTCACACCCATGATCAAAAAGAAACTACAAAACACGGCATATCAAGAAAGAGAAGACCTCGAACAAGAACTCTATATCAAACTCATCGAAAAAGTAGACCGGCTGATTTACCAAGAAGGACCTGGCTTTTGGGAGTTTATTGTGGAATATATGACGAAGTTGTAAGAGAGGCTCTTGGTGCGAATGTGAGGTGAACATAAAATCCCCGGGACATTCGCACCTTTTTATTCGACAAAAATGAGAAAAAATGTATATTTTATAAAGGTGAAAACAAAATTCTTTATTGAAAGTTGTGGATTTTGCCTATCATTTCCTAAAAAATGTTACAATTAGGGCAGAAATCGCA # Right flank : GATTTTAATAAGAGAAAAAAAGCATTTATGTTTGATCGAAAATTATTAGTTGAGTAACTACACTGATTAAAGTTTACTTTTCTTCAAAGATTGGGAGAAGAGTAGTCATTTTAGTTAATAAAGAAAAATGAAGACAATAAAATTAATTAGAATAGCTCTCCTCGGATATGTTAGAAGAACATTAAATCAAGATTAATGAATTAAAAACTCGGTGCGAATGTGAGGTGAACATAAAATCCCTGGGGCACCTGGGGCATTCGCACCTTTTCATTCGATAAAAATGAGAAAAAATGTATATTTTTTAGAGGTGAAAACAAAATTCCATATAGAAAATTGAGGGTTTTGGCTATGATTCCCTAAAAACTGTTATAATTAGGGCGGAAATCGCAGTCGCACTCTATATGAGTGCGTGGATTGAAATAATTTCTAAGAATGTATCAGCGCTTATAACGAAGTCGCACTCTACAAGAGTGCGTGGATTGAAATTTCTCTGGCACTGT # Questionable array : NO Score: 8.63 # Score Detail : 1:0, 2:3, 3:3, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //