Array 1 23512-22763 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLFP01000002.1 Acinetobacter baumannii strain ABBL067c contig-1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 23511 29 100.0 31 ............................. TACTATTATAATGATCTAAACCCATTACAAC 23451 29 96.6 31 ............................T GCAGCTACTCGACATGTTGGTAGGGCAGATG 23391 29 96.6 31 ............................C AGTCGGCTGGTGCTAATTGAATAAAATCGTT 23331 29 100.0 31 ............................. GATTGAGGCGATTTTTATCGCGGACATTGCC 23271 29 96.6 31 ............................C AGTCCCCGCTTTGAAGCATTCCCATCAGTAC 23211 29 96.6 31 ............................T CACAGCTATCGTCTGGCTGCCGTCGCGTAGA 23151 29 93.1 31 A...........................T TATTATTAAACGGGAAAAGTATATTCTTGCT 23091 29 100.0 31 ............................. TACTATTATAATGATCTAAACCCATTACAAC 23031 29 100.0 31 ............................. TCATCAATAAGTTGGCCTTGATTTAAATAGT 22971 29 100.0 31 ............................. GATACAAACGAGTTCGCATCTCGACCAGAAG 22911 29 100.0 31 ............................. TTATCCAGATAAAACCATATCTACAAAGTGG 22851 29 96.6 31 ............................T CAACCTGAACACAGACATACATGTTCTATTG 22791 29 82.8 0 ...GC...................AT..T | ========== ====== ====== ====== ============================= =============================== ================== 13 29 96.8 31 GTTCTTCATCGCATAGATGATTTAGAAAA # Left flank : | # Right flank : TTGAATCTTAAAAAGAGAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTACA # Questionable array : NO Score: 5.87 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.77, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 5082-3559 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLFP01000277.1 Acinetobacter baumannii strain ABBL067c contig-4000025, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 5081 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 5021 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 4961 28 100.0 32 ............................ AATGTACTTTAATTTCCACTCGACACCAGTTC 4901 28 100.0 32 ............................ CATGACCGAAACAGCCAAAAAGGTTTTATGTA 4841 28 100.0 32 ............................ TAAAGGATAGTTAGCTGTAGGCCCTGCGGTTT 4781 28 100.0 32 ............................ TTATAGTTATGTGTGTGATATCGTTAAGCTGC 4721 28 100.0 32 ............................ TAGCACAATCCAAACCTCAATAAAAAGTAAGA 4661 28 100.0 32 ............................ GAGCCAATAAGATCGCGAAGTATGCGGAAATC 4601 28 100.0 32 ............................ ACAGAGAAAACCCCACATGTTCGAGGGACTGC 4541 28 100.0 32 ............................ ATAATTCCGCCATCCTCGGCTGAGATATGGGT 4481 28 100.0 32 ............................ TGCCGGAGCGGTCTTGTCATTGGCGAACCCGC 4421 28 100.0 32 ............................ TATGCGATTTGATAATTAAATTGCGATACTGG 4361 28 100.0 32 ............................ GAAATAAAAAACACCTGATGAAAACAGTTCAC 4301 28 100.0 32 ............................ ATAATCACGAATATCACCAGTAAACCAGTGAT 4241 28 100.0 32 ............................ TTATTGGTCCTGGTCAGTGGAATGGTGATTCT 4181 28 100.0 32 ............................ TGGGTAAAAGCCGATGGATTAATCATCTTTTG 4121 28 100.0 32 ............................ ATTAACAAGAGTGGAATTTATTGAACTATTAA 4061 28 100.0 32 ............................ TCTGGGTTCTTTTCGCGTGTATGGGATACTTG 4001 28 100.0 32 ............................ TGTAAAGTCATTCGTAATAACCGTTATACGGC 3941 28 100.0 32 ............................ AAAACCAATCAAATAACGGTTATGTGGCCACA 3881 28 100.0 32 ............................ CATAGCGACATATAGTTTTGCCCGGATCTGAT 3821 28 96.4 32 ..................A......... TGTTTCGCGTTGAGGTCCGGGTAATCGCCTAT 3761 28 78.6 27 ....C.....CTCC..........T... GTCTTGTATCCTGATTTCAAAGATTCA 3706 28 92.9 32 ....C....T.................. ATATCACGCGCCATTGCAAGTTTTCTACCGAT 3646 28 89.3 33 ...A........CC.............. TGATCTTTAAGATTAAGCATCCGTTCTGTTTTT 3585 27 85.7 0 ...TG.......C...........-... | ========== ====== ====== ====== ============================ ================================= ================== 26 28 97.8 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : | # Right flank : GAGTTTCTTTCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGTTGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATGATATTTAAACTTTAACAATAAACTATGCATGTCATTTTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCAATTTTGGATAGCTATGCTATTCGTACAGGACATTCGTCTTGGCAAGCACCAATGACAATGGACGGCTTAAAAGAAATTCGTAGTGCATTAAAAAAAGTAGCTACCCGACAAACTGCGGTGGCCGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTGGGAGCAAAACATAAATTTGCACACGATGGTGCATACCCAGTTGCATCGACTAAGAAACAGCAAAAGTTACTCATGCTTGATGAGTGGGTCAAAGTAAGTAGCTTGTTGGCAGGTGCAGCAGGAGACATGCATGATATTGGTAAGGCA # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 4970-9139 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLFP01000412.1 Acinetobacter baumannii strain ABBL067c contig-7000013, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 4970 28 100.0 32 ............................ TTTGACTTTGCTGCCTCTAACTCTTTTGTTTT 5030 28 100.0 32 ............................ AACTGGAGCAGGATGAAGATGCGAAATTAATT 5090 28 100.0 32 ............................ AACAGTAAACTACCGGATTTACAGTTCAGACA 5150 28 100.0 32 ............................ GAACTCGCTCAAGACCAATGAAGTTAATGGCA 5210 28 100.0 32 ............................ CTACTAACTGCCTTGCATCTTCAGCACCGAAC 5270 28 100.0 32 ............................ ACAATGTGGGGCTTTTTTTGTTTGTGAAATTA 5330 28 100.0 32 ............................ TTATTGTGAGCACCTTGATTGCTGTGCGCTGC 5390 28 100.0 32 ............................ TACAGCGGGAAACTTGAAAGTCATTGCGAAAT 5450 28 100.0 32 ............................ TGATTGCCCCCTGAGGAAACTGTATAAAGTCC 5510 28 100.0 32 ............................ AAACACCAACTAAGCCATTCCCTATTCAAAAA 5570 28 100.0 32 ............................ ATGAACTTTTAATGGATGCATGCGCCGCCCAC 5630 28 100.0 32 ............................ ACGAACAACGATAATTTGGAATACACGCTCAT 5690 28 100.0 32 ............................ TCAGGAGAAAGATCGTTCAAAAGCTCAAAACC 5750 28 100.0 32 ............................ TGAAAGTTTTGATATCCACTCTGCTGTTTCAA 5810 28 100.0 32 ............................ AGATGGTAAGAAAATTATTGAGTCTGGAGACA 5870 28 100.0 32 ............................ CGACAGTCCAGTTGATCAGATCTTGATTAGAC 5930 28 100.0 32 ............................ AATGACATGGTTCAACAATTAAATTCATCTCA 5990 28 100.0 32 ............................ GTTCTTTTCTGCAATATGTGCCATTAGGTATT 6050 28 100.0 32 ............................ ATTTTAGATGAAACAAAAGATAGCAGGATTAT 6110 28 100.0 32 ............................ AGACCAAGCGGATTGACCGTATTGATAAATAA 6170 28 100.0 32 ............................ TTCTGCAATACAAATCACTGGATCAGCCAGGT 6230 28 100.0 32 ............................ TGAGTCTTTGATTTCCCAAATATTACTTGAAA 6290 28 100.0 34 ............................ CCTGAAAAATTTCACTGTGTCCATTTCGTTATTA 6352 28 100.0 32 ............................ TATGTCTTTAAATTCTGAAAAAACACTTGTTC 6412 28 100.0 32 ............................ GAAAAAATTGAAAACTTTTTAGAAGTAAATGA 6472 28 100.0 32 ............................ GCCACACATGCCTAAAAACGCAAGTGCGCTCG 6532 28 100.0 32 ............................ ATTATCAGATAAGCCTTTTATGAATGATCGTT 6592 28 100.0 32 ............................ ATTAGCTATTAGCTTTTTGGCAACAACAACAG 6652 28 100.0 32 ............................ AGTTCATGAAAACAGCTTTAAAAAGAAAGCAC 6712 28 100.0 32 ............................ TCCGAAGGTAGTGAAGCTGTGTGTGAATTTAC 6772 28 100.0 32 ............................ TTGCAAGCTCGTCTAGCTAAAGTAGACCCTAA 6832 28 100.0 32 ............................ TGGTACGACAACTACGAAAAGCTGAGCAAAGT 6892 28 100.0 32 ............................ TCAACTTAAATGGATGCTCCCCGCGGTGAATT 6952 28 100.0 32 ............................ TTGATTGCTAGACGGATTTTTAGGCAGATCAT 7012 28 100.0 32 ............................ GAGTTTAATGCGCTATATGGCGACGAGGATTT 7072 28 100.0 32 ............................ CATGCAATCGCGTTGATTACCGCAGCTTCGAA 7132 28 100.0 32 ............................ ATGAGCCGCAACCATACGGTCTATGACTTCCA 7192 28 100.0 32 ............................ ATAGCGCCCTGCTCTATGTTGTCACTTCCGAA 7252 28 100.0 32 ............................ TCCAAGTGAATCGGCTCCTAATGCAAATGACC 7312 28 100.0 32 ............................ TGAAAACCAATATGCTGCCTAATTGCCATAAG 7372 28 96.4 32 ....A....................... GATCTGCGTCCATTTGTACTTGCTGCGGGTGC 7432 28 89.3 32 ....T.......AT.............. ATATACAGCACCGCTTAGTGCGACGCGGTCAT 7492 28 89.3 32 ....T.......AT.............. GCCCACAGGTTGAGCATCAACGGCCATCGAGA 7552 28 89.3 32 ....T.......AT.............. ATCATAGAGCTCACTTTGTCGTTGAGCCTGCA 7612 28 89.3 32 ....T.......AT.............. AGAAGGCCCGTAATTTAACTGTAAGCCGTGGT 7672 28 89.3 32 ....T.......AT.............. TCTTCCTGAGTTTTAATCCCATTTGCCTTACA 7732 28 85.7 32 ....T.T.....AT.............. CATCTTCGCCAATTGCTTTTGGAGAGTTGCTA 7792 28 89.3 32 ....T.......AT.............. TTCAGGGAATTATCGTGAAACTTTCATTGACT 7852 28 89.3 32 ....T.......AT.............. TGCACCAGCTGCTGGCTGGTTGAAATCTGCAA 7912 28 89.3 32 ....T.......AT.............. AGAAGGTGCAGAGTTTTGGGACTTTGGGTGGT 7972 28 89.3 32 ....T.......AT.............. TGTTTCAAAAGCTACACCATCAAAACCATTGC 8032 28 89.3 32 ....T.......AT.............. TATTTAAGTAATAAGTTTAATAACGACCTAGT 8092 28 89.3 32 ....T.......AT.............. AACACGTTCTCTATATCGCTGTTTGCGGTCAT 8152 28 89.3 32 ....T.......AT.............. TTCAGTTGGATATGCCTTTGATACCAAGAAAC 8212 28 89.3 32 ....T.......AT.............. GCCTGCAGACACGGATTTACGCAGCTGATCGA 8272 28 85.7 32 ....T.......AT...........C.. TAACCAAACTATGTCATCGATCGGAGATTTCA 8332 28 89.3 32 ....T.......AT.............. TTAAAATAAATGCCTGTGGTTTTTTCTTAACT 8392 28 89.3 32 ....T.......AT.............. AGTTTCCGAAGTTGAATTACACTCGCCAAGTT 8452 28 89.3 32 ....T.......AT.............. TAACACAGTGATTTGATTACCTTGAGCAACCC 8512 28 89.3 32 ....T.......AT.............. ATCTTGATGCCGAGGTCTTTAGCTTCTTGAGA 8572 28 89.3 32 ....T.......AT.............. TCATCCACCTTTGATGAAACGGATCCACGCAA 8632 28 89.3 32 ....T.......AT.............. TCTTGTGTGACGGCCTCCACTCCAGATCCCGC 8692 28 89.3 32 ....T.......AT.............. TTAAGCTTCAAAAATAGCCATTGATTATAAAA 8752 28 89.3 32 ....T.......AT.............. TGACAACTTTCCACGGCAATCAGGGCTTTCCA 8812 28 89.3 32 ....T.......AT.............. TAAAGATGCACGTGGCCTAATGCAAGTTATTC 8872 28 89.3 32 ....T.......AT.............. TTTAAAATTAGGTGCTGAGTTACCACGGCTCA 8932 28 89.3 32 ....T.......AT.............. TAAACCAAGAACTTGAAGATTTTGATGCTTAT 8992 28 89.3 32 ....T.......AT.............. TAAAAATAGTGTGTTAATTATTTATGATGAAA 9052 28 89.3 32 ....T.......AT.............. CGTATACATGCACATCAATACGATATCCCGAT 9112 28 89.3 0 ....T.......AT.............. | ========== ====== ====== ====== ============================ ================================== ================== 70 28 95.4 32 GTTCGTCATCGCCCAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAACGCTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGCAAAAACTCTCATGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTAGTTAAAGATGCTTTTGTAATGCCACTCGCTTTTACATGTGCAGCAAGAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACTTTTAACCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : ATA # Questionable array : NO Score: 5.91 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.88, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAGATGATTTAGAAA # Alternate repeat : GTTCTTCATCGCATAGATGATTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //