Array 1 13407-13079 **** Predicted by CRISPRDetect 2.4 *** >NZ_WLTQ01000073.1 Providencia sp. wls1949 579, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 13406 28 100.0 32 ............................ TATTGGCAATTGATAGTAGGGAACACTCCCCG 13346 28 100.0 32 ............................ TCCCCACAAACTATCTCAACATCCCGCACCTG 13286 28 100.0 32 ............................ ATATGATGAGGCTACGTTCGAAAAAGCGTGGA 13226 28 100.0 32 ............................ ATTATAAAAGAGCATATATTCGATAAAATCAG 13166 28 100.0 32 ............................ TAAATATATGGATTTATACGCTAGTGTTAAAA 13106 28 96.4 0 .........................G.. | ========== ====== ====== ====== ============================ ================================ ================== 6 28 99.4 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : ATTAAATCGGCGTTAGATAAGATTTCAAACATTGAGGCTAAGCAAGGGTTGCAATTGCAAGAAATTGATAAGTTAGATTTCCTTGCAGATACGCGCAGTATTCAAAATAGTCAGCGTATGAGTAATTTGTTAGATACAAATTGGACAGGGGCAACATCAGACTATTATAAAGAGATGGCAATGTTCCAAGCGTCTCAGGATATCTTTAAAGATTTAAATAGCATGTCACTGTTTGGCGGTCGCTAATTTATTAGCCAGCTTCAATTGGGTTGAGGCTGGCTAATTGGTTTACCCACTTCTTTTTCCCTCTTGTTCATATTTTTCCTATCAAACCATTGTATTTTTCTTCGTATGTTTTACCCTTTATTTACCTTTTTATTTTTGCTCTTTAAAAATTTCTGATAAAACAAGATGTTACTAAGGTAGTAAAAAAAGAAGGTATTTAGCCAATAATTAGCTTAATTTATTGTTGTCTAACGCATTTTATTTGCTAGGCTATC # Right flank : TCACGAAATCGACGCTATATATTAATGAATAATTAGAATACTTTTATAATGAATAGGTTTTAGTCGGAGATATAGAGGTTAATACATATTAATAAGAGTGATTATTTCAATTATTAGATACTTTATCTCTATCAATATTTGATTTGGCATGTTAAGGCGAGTGTGTTACTTTTATTAATACTTAACGTGATATATTGAAATTAATTTATGTGGTTTTATTGATATTCAAAATAATACATTTAAGTCGCTTTTTAAATGTTTCTTGTTAACTGTTTATTATATATGTTAATTTTACTGATATCTTATCAGCTTAGAAATCGATGATTTTACTGTTAACGTTCACTGCCGTACAGGTAGGTTAATACATAAACCATATCAAGGTGATAGCTATTATAGGCTTGTTAGCCTTTAGCGAGATGAACAAATGATGATTTATCAACTGATATCAATTATAGGTATATGGTTATATGTTTAATGACTGCTGTTTTTTATAATTTTAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 36380-36052 **** Predicted by CRISPRDetect 2.4 *** >NZ_WLTQ01000114.1 Providencia sp. wls1949 631, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 36379 28 100.0 32 ............................ TATTTTTGAATTTGTTGATGTTTCTTAACCGC 36319 28 100.0 32 ............................ AATCCAATCATCACTTTTAACAATCCAATGTC 36259 28 100.0 32 ............................ TGGTATTTGGAGAACAGATGCTTATGCCGATG 36199 28 100.0 32 ............................ TAGAATGAACACTCTGTCAGGGTGAATATTGA 36139 28 100.0 32 ............................ TCGAGGAAAAATAACCGGTACATCCACCAGCA 36079 28 78.6 0 .................T.....GTTGG | ========== ====== ====== ====== ============================ ================================ ================== 6 28 96.4 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : GTCGATTCTGACAGTACCAGAAAATGCCATACCAGTCAGTTATGTACGACAACATGTGAAAGGTAAAAAACGGACTGAACTGGATATACAAAAGAAAGCGCAATTTCTCTCAATAAAATCGGGGCAGCCTGCGGAAGTTTGCTTACATGTGTTGAGGAAAAATCAGGTTAATGAATTTAGTCGATTGCCTTTTATCTGGATGGAGAGTCAACAGAGTAAATCTAAATATGAAGGAGCAATTCATCGCCCGTTTCCGTTATTTATTCGCTGTATTTCTGCGGGAAAAGCACAATTAGGTGGGTTTAACTGTTATGGATTAAGTCAGCAAGTCGGAAGAGATGTTGAGTTAGCGACAGTTCCTCATTTTTAACCTTATTATTTTGCTCTTTAAAAATAAGATTATAAAACAATGAGTTACAATTAACGGTAAAAAAGAAGGTATTTTCTCTAAAATATCACTAACTGTTTGTTGTAACTTATTTTTTATTTGATAAGCTCGC # Right flank : TGTTTTAAATAAGTGAAATATACCATAATCATAAAAATGGGAACTTATAGTCGCTAGTGTTGTTTGTGAGATATCATCCCATTAATAGTTAAAGCTGAAGATAATATATAAAAAGAATCTATCAATAGAGCAGTAAATAATACTGCACATCAAATACGTAACCTAATAAATAGAATGATATTATTTAATAATAGTCAAATTTACGTTTTAGTTGTTATGATTTAGATAATGTTTAGCGTATTTGTAAATATTCGCTAAATAACATTGCTATTGATATAAATAGTAAAAAATAGCCCCAAGATATATTGGGGCGAAGCTTAAAATCAGCATTACAGGGAAAATCCAGTAATCAATGCATTCTCTCGTAGGGGGAGAATGTGATAAGTATAGTACAGTAGTTTTAATTAATTGCATAACAAGAATATGTTACCAAATACTGAATGGAATGTACTGTTTTGAACTATTTTAGTGAATGAAATACAATGTTATTGATAAGGTAA # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 45721-45393 **** Predicted by CRISPRDetect 2.4 *** >NZ_WLTQ01000114.1 Providencia sp. wls1949 631, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 45720 28 100.0 32 ............................ CCGCGCTTGCAGTAACAATCTCGGGGCGTTTC 45660 28 100.0 32 ............................ ATTAATCGACCATTGATAACCACATGGTTTTC 45600 28 96.4 32 A........................... TACACGGCAGTGAATGTTAACAGTAAAATTAT 45540 28 100.0 32 ............................ ATGCTGCGAGTTGTCGATGAGTTAAGTAATGC 45480 28 100.0 32 ............................ TGAAATTAACGGGGATTCCGTGAATGTATCTA 45420 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 6 28 99.4 32 GTGCACTGCCGTATAGGCAGCTTAGAAA # Left flank : TTTTATATTTTGTGAAGCGTAATACTGTTAATATTCAAAGCATACTCTTCGTATTCCAGTGATTATATTTTATTTCTGATGATAAATTGCTTCTGTTTTTTAATGAAGAGGTTATTCACAAGATGATATAGATTGCTTTTACACATGAACAAAAGTATTTATCTAATAGAGTTTAAATACAAGAGACAAAAGAATTACGTTAGGTGACTATTCTTTTGATAGCTAACTTAGCGAGCCGACTTATGCAACCGATGAAAATCGAAAAATTGGCAGAAGGGCGTGTGTTATTCAAAATTGAAAATTCTTAACGTATTTCTATCTTTTTTGAGGGGATGATATCAGTTTATATAAGGTTCAGTATTTTTTACTCCTTTATTTTTCTGGCTGAAATGTTTCTATTAAAAATCAACTGGTTATATGTCATTAAAAAATAAAAGGTATTTTCCACAAAATCAGATGTAATATATTGTTGAACTTAGATTTTTTGCTGATAATTTATA # Right flank : TGTGACCTACGGCATAGAAGGCCGTAGGTCACTAGTGTGCGATTATATCAGTGGCTCAAAATCCTCTTATCACTATATGCCTGCAATACTGTAAAAATTATTATCTGTTAGTCTTAATACAACATATAAGTTATTTTTATGATATGGATTGGGATCTGCTTCCCAAAATTACCTTATACACTATGAAATTAAAGGCGTAACGATAGACGTAGCCTAAGTTAAATTGTATTAATATAGCAAGGTGGCTTATCAAAACAAACGGAAGGTTGGCTTAGCATGGATGATCTCTCTCCGTCAGATTTAAAAACAATCCTTCATTCTAAACGTGCCAATATGTATTACTTGGAGCATTGCCGAGTGATGCAAAAAGAGGGGCGAGTTCTCTATTTTACTGAAGCAAAAAATGAAAATCTTTACTTTAATATTCCGATAGCGAACACAACGGTTTTACTATTAGGAACCGGCACCTCTATTACTCAAGCGGCGATGAGAATGTTATC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 58247-57679 **** Predicted by CRISPRDetect 2.4 *** >NZ_WLTQ01000114.1 Providencia sp. wls1949 631, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 58246 28 100.0 32 ............................ AAGGGGATCGAGTACCCAGAGGTGCAGCGATA 58186 28 100.0 32 ............................ TGCCAATTGGCATTTAGTGGTAGGGAACACTC 58126 28 100.0 32 ............................ ACGCTCGATGTGCTTTGGAACTTCATTCTATT 58066 28 100.0 32 ............................ AGCAAGCGCCTTGATAGCAACGTTAGCCATGC 58006 28 100.0 32 ............................ ACAATACTGAAGAATAGATGCTTGTAATGTTG 57946 28 100.0 32 ............................ GAACGGCTCTACATAACAACGATGCTCAGGAA 57886 28 96.4 32 .................T.......... CATCAGTAGTAATAACTTCGGTACCAATATGT 57826 28 100.0 32 ............................ ATTATCTGACGGTTCTCCGTTCTGCTGTATAA 57766 28 100.0 32 ............................ ATCGACGGTACTCAGTTCCGTTTTGCCGACTT 57706 28 89.3 0 ...........T.......A....A... | ========== ====== ====== ====== ============================ ================================ ================== 10 28 98.6 32 GTTTACTGCCGCATAGGCAGCTTAGAAA # Left flank : ATAGGAGAACTAACAGTGAGCGACAACGAAATGGTCTATACAGCCACTTAGATTGCTCCAGTATTTACTGAAGTACCAATCTTGGCACTACTGAGTCTGACTGGAATTCTGTGAATGAAGATGAACGAGAGGAGGCTATATCGCATTGTATTGCTGACATTGTTGATCTGTGCGTAGCGCCAAAAGACGATTAAAAGGCAATACTAATGAAATGACTACGTCAGAATGGTAAAGCTGAGCAGCGGGACAGGCACAAGTAGCATGGCTTAGTTAACGTTGATGTAACAAAGCATTACAAATAGTTCAAATTTAAAATATCGCTATTAATTTTAGGTGGGGATACAAGATGTGCTGTTTTCCTCTTTTTTACCCTTTATTTTCTCACTTAGAATATATTGGTTAAAAATCAAAAAGTTAAATAGTGTTGAAGTATAAAAGGTATTTCTCATAAATCAGGTGTAATTTATTGTTGAATATGGTTTTTTTCATGATAAGTTATA # Right flank : ATAAGGTTTGATGACATTAACTGGTTATATAATTTACTTATTGGCCTGAACACCCAATCCTAACATTTGCTGTGTCTACTGAGAGAAAAAAGTATGGCACAGCATAGCGTTATCAAAATGTTTAACGACACTCTTGTACCGGCTAATCCGGCGGCAACGGATTTTTTGCATCCCAAAATCAAGTGTGATGATGTACTTTCGTCTGATTTCAAGAAAGCTCGTAACCCACGATTCCATCGCAAGTACTTTGCACTCCTCAATCTAGGGTATGAATGCAGGGAACCTACAGGCGGCACTATTTCGCCTGAAGAAAAAGAACTCGTTCGCAGCTACATTAAATTCCTAGCCTACTACACAGATAATGATGATGCTCTTCAGTTTGCTCATTAAATCGCATTAGAATTGTGTGAAAAAGAAAGTTGTTACTGCTTACGCACTTATCAAGATAGAGTTAAAGCATCGCTCAGTGTTGCTGAGTTTATGTTGTATCGCCCAATGTA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTACTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTTACTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //