Array 1 376033-374682 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZLP01000002.1 Bacillus sp. Marseille-P3800, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 376032 32 100.0 34 ................................ GCTACTGCTCCGATTGTGCAGAAGCACGAACGAT 375966 32 100.0 35 ................................ ATGAACAGGCTCGTAAACAGTTCAGATGGCGTAGG 375899 32 100.0 32 ................................ TGAATACATTGCTTTGTAAGACATACTTTTAA 375835 32 100.0 35 ................................ AGAAGTAATACCACTAGAACCAATATTCGGTTGGG 375768 32 100.0 34 ................................ GTCCCATTTCGCACTCCACCACTCACCGCTAAAC 375702 32 100.0 35 ................................ GTCATTTTTAGCAATATAAATTCGTAATCTTTAGC 375635 32 100.0 35 ................................ AATGACTACAAAGAGAAAGTCATTGATAAGACTTT 375568 32 100.0 34 ................................ TTCACAAGCTCAACAAACTGTACAATTAGCACAC 375502 32 100.0 34 ................................ AAAAACTGAGAGAAATGGGTTATAGTCCATTTCC 375436 32 100.0 35 ................................ TTCACTGGTTTTAACAGTTGGAGGTAGTCGATCAT 375369 32 100.0 33 ................................ TTCGAACTCGCTTTCCGTTTTGTACATACTCAT 375304 32 100.0 34 ................................ AATTATATTGAGGTGTGGGAGGGAAAGGATCGCA 375238 32 100.0 33 ................................ TTTGTGTGAATAGGGGTCTTGTTGTCAAAGAAG 375173 32 100.0 33 ................................ GCCATATTAAACCGCCTCCACTTCGTTATTTGT 375108 32 100.0 33 ................................ TTTACCGCACCGATCACAAAATTGAATTAAACT 375043 32 100.0 34 ................................ CCCTCTCTTATAATACTCATTTTTAGTTTCATCG 374977 32 100.0 34 ................................ TACGATTGTTTCCTTCGCGCTGTCGATCGGACTC 374911 32 100.0 34 ................................ AAGGTAACACTGAGTATATTTCAAGCGGTTATAG 374845 32 100.0 34 ................................ TGTAGATGATGGAGACACGATCTATCAACACTTG 374779 32 100.0 34 ................................ ATATGAAAATGTGATGTACGAACCTGTTGATGCT 374713 32 93.8 0 ..............................TG | ========== ====== ====== ====== ================================ =================================== ================== 21 32 99.7 34 ATCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Left flank : GTGGGGATTTAGATGAATATCCTCCATTTCTATGGAAGTAGGTGAAGTATGCTCGTATTGATTACATACGATGTTAAAACATCAAGTCCAGGCGGTACAAAAAGGCTACGTAAAGTATCGAAGGCATGCCAAAACTATGGACAACGTGTGCAGAACTCTGTGTTTGAATGTGTACTAGATGCGACCCAACTTACGATTTTAAAACATGAATTACTCGAAATCATTGACCCAGAAAACGATAGCTTACGGTATTATCGATTAGGGAATAACTATAAGAACAAGGTTGAACATGTTGGCTCAAAACCTGCCTTGCAAATAGAAGACCCTCTCATCTTCTAATAGGTGCGAACCCTAAGCGAACATAGAATCCCTAGGAGACCCGCACCAGTTTTTAAGAGGAATGTGTGATAATGTGTAACGAAAGTTGGTTTTAAATTCGTTTTTTGGTTCTATTTTTTGTGATATTAGCGTTATGAGGTTGTTTTTGGCCTTATTTCGCT # Right flank : TTAGATCTGTTATAGTGTCATCCAGGTTTTCAAAATAGTACTCCTTCATAATGACAAAAACACCCCACTTTACATGTAAAGTGGGGCGCTTCATCTTATAATCCAAATACGATTGGCATCCAGAAGTAAACGGCTCCGGTAATAACAATGATGGAGACGATGTTTAACCATACACCAGCCTTGGCCATATCGCCGACTGAGAGATAGCCTGCGCTAAATACGGCAGTATTTGGAGGTGTTGCAACTGGCAGCATGTAGCATGAACCTGCAGCAAGGGCCGCCGCAGCCATAAGAAGCAGTGGATCAATGCCGAGGGCAATACCAAGCCCGACAGTGAGTGGAAGAATTAAATTGGAAACCGCCGTATTGGAAAGAACCTCTGTAATACCGAGTACAAACACGACTAAAAGCAATAATACAAAAATGTACTCCATACCTTGAAGCGTTTGAAGCACATCTCCAATTGATTCATTTAATCCAGATTCCCCAAAAGCTGCGGC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 388053-386502 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZLP01000002.1 Bacillus sp. Marseille-P3800, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 388052 32 100.0 34 ................................ CCAAGTCAGAAGGTGTACAAATATGAAGTCGCAG 387986 32 100.0 35 ................................ ATGTTTAAATGTATAGGAATAAAAGATGCAAAATA 387919 32 100.0 33 ................................ CTTAACAGCATGCCAAGCACAGGGCAGGCACAA 387854 32 100.0 35 ................................ TATAAGAAGATGACTGACGACTACAGATACGCCAA 387787 32 100.0 36 ................................ GACTTGTATGCATATGGTATTTACGAAGGGGATGAT 387719 32 100.0 35 ................................ AATTAGCTGCAGTTTATGCATGTGTCCGAGTTTTA 387652 32 100.0 33 ................................ ACCTCAATGCAAACAACTATATCCAATATCAAT 387587 32 100.0 33 ................................ TAGCGAAAGGAGGGAAGGGGGTGAAACGACATG 387522 32 100.0 33 ................................ ATTTCCAACTCCACATTATGAATTGTTTTTCTT 387457 32 100.0 34 ................................ AAATCCGTAATTTTTTCTTAGTCTGTCTATCTGA T [387444] 387390 32 100.0 33 ................................ AAGATGGAGTTTATTGCCTTTTACATGCCATTG 387325 32 100.0 33 ................................ GTGAGCTTACGGAGATACCCGACGGTGTCACTA 387260 32 100.0 36 ................................ ACTTAAAGTGAAGTTATGAATGTCAATTGTCGCAAT 387192 32 100.0 34 ................................ CCTCCTTTGCTATCTCCAATATTAAAGGAAGGTT 387126 32 100.0 34 ................................ AAATAAAAATGTATGATGTAGTTGTAATCGGTGG 387060 32 100.0 34 ................................ CCTCCTTTGCTATCTCCAATATTAAAGGAAGGTT 386994 32 100.0 34 ................................ AAATAAAAATGTATGATGTAGTTGTAATCGGTGG 386928 32 100.0 33 ................................ AACGAAATTGATATTGTAGGAGAATACAAGCCA 386863 32 100.0 33 ................................ CCCACTTTAAGCTCATTAGGGCTGTTTTCCTAA 386798 32 100.0 34 ................................ CGCACACATCACGATAGCTAAAAACAAAGCGACC 386732 32 100.0 34 ................................ ATATAATCCAGTGTGTCTATGCTTGATTCATAAT 386666 32 90.6 33 .........A..GA.................. TCTAATCATTTCAACTTGCTCTGCAAAAAACTT 386601 32 87.5 36 .........A..GA.................A AAGTTTCAAACTTGCACTAAATGTGCCTGAATTCAT 386533 32 84.4 0 .........C..GAA...............G. | ========== ====== ====== ====== ================================ ==================================== ================== 24 32 98.4 34 ATCGCACTCTTTATGAGTGCGTGGATTGAAAT # Left flank : GCCGTATAGGGGAGGTGAAAGTAAAAACAGGTCATTATCCTGAATCCGAATTTCGCAGTGGATGAAGCGCCAATCCTTGCCGTTTTGATTTTGAACAGCTAATAGATCAAAGTTATCTCCCTCTCCTTTAATCGTAAAAAAGCCTTGCTGATTATACCAATATTCGACTAATTTACTAGTTGGTAGAGTCATAGACACCCTCCTAAATCCTCATATTCCTTCTATTATAACAGGCGTATGTCGAATAAACGATTAAAAAGAAAGGGAAATGTCGGGAGAAAAGCGAATAAAAGAAGAGGAAGAACGTTTTAAGCCATCTATGCGATTCTGGTGCGAACCCGAAGCGAACATAAAATTACTAAAGGACCCGCACCAATAAATTGGTTAATTGTGTAGAAATATGTAATTGAAAAAGGGATATTTAAGAACGTTTGTTTTGTTTTAGTCTATTTAAGAATACTTTTAAGCGGAAATCGAGGTTATTGCACCTGATTTTCGCT # Right flank : ACCCATAGATCATAAGGAACATCATCCGTTTCCCATCGCACTCCTGGTGGGTCCATCCCTTGCAGAGAAATCATACACTTTAATCCATAAGTGTTGCGCCCAACCGATTAAATTCTCTATGACTGTAAGAATTGAATTACATAAACTGTTTCTGCTTTGCACTCGTCACAGAGTTAGTGATAGTGGTTGATGTAACAAGTCACAGACAATGCATTTTTACAAATGTTAAAGCTACGAATATATGATAACCGAAAGGGAATTAAAGATGAATGAACGAATGTTTAAGCCGCAGATTGACGAGGACATTTTATTCAAGTGCGTTTCTCAACAGTTGCGACGGGAGTTAAGAAAATTGGACCTTAACTGGAGAATTGAGATTCTTTCAGAAGAGGTTAATTTTACTACAAAAGGAATCTATCGCATTTCTGGCACGATTCATAATAAAAAATGGTCACTTATCCTGAAAATTCTTCAAGAAGTTGAGGATAAGCTAGATCCAC # Questionable array : NO Score: 9.18 # Score Detail : 1:0, 2:3, 3:3, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCACTCTTTATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.38%AT] # Reference repeat match prediction: R [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //