Array 1 3275810-3272309 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP069994.1 Klebsiella pneumoniae strain FDAARGOS_1321 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3275809 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 3275750 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 3275689 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 3275628 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 3275567 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 3275506 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 3275445 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 3275384 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 3275323 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 3275262 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 3275201 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 3275140 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 3275079 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 3275018 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 3274957 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 3274896 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 3274835 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 3274774 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 3274713 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 3274652 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 3274591 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 3274530 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 3274469 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 3274408 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 3274347 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 3274286 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 3274225 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 3274164 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 3274103 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 3274042 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 3273981 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 3273920 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 3273859 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 3273798 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 3273737 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 3273676 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 3273615 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 3273554 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 3273493 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 3273432 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 3273371 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 3273310 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 3273249 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 3273188 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 3273127 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 3273066 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 3273005 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 3272944 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 3272883 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 3272822 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 3272761 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 3272700 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 3272639 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 3272578 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 3272517 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 3272456 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 3272395 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 3272337 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 58 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //