Array 1 40674-43282 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJMY01000004.1 Lactobacillus delbrueckii subsp. bulgaricus strain NBRC 13953 sequence04, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ====================================================================================================================================================== ================== 40674 28 100.0 33 ............................ AAAATCGTGTGCCCGTCAAGCCAGCCGGTGATT 40735 28 100.0 33 ............................ TCACACAAAAAGCCCGCTAGATTGAATGTCTAG 40796 28 100.0 33 ............................ TGTATTCAGTTTCGTTTGTTTGATCCTTGCCAT 40857 28 100.0 33 ............................ TCAATTTGCTGTGAGTGTAATAATTGATGGTGA 40918 28 100.0 33 ............................ TTAAACCCAAACTATAAGCGTATGGTTCGCTCA 40979 28 100.0 33 ............................ TGAGACTCATTGCGCCGCTACTTCAGCGGGCTA 41040 28 100.0 33 ............................ TCTTCGATACTAATCGAAATCGATTCAAACCCT 41101 28 100.0 33 ............................ TATGGACTAGAGGGATGCACCAGCAAGACAAGA 41162 22 78.6 0 ......................------ - Deletion [41178] 41184 28 89.3 33 TG..C....................... CATAAGCCCGGCCGGCTGCCTTTTTTGACGTGA 41245 28 100.0 33 ............................ TAATTCGTTTTTGGGCGTGTCAGAACCTTATAA 41306 28 100.0 33 ............................ TAGGGCTTTGAGTTACTACGGCTATGAAATGGA 41367 28 100.0 33 ............................ TAACTTAATTTGGATTGCTACCAAAAAGCCGGG 41428 28 100.0 33 ............................ TATCAGCCTTTTCGAGGTAATCACGGTAGATTG 41489 28 100.0 33 ............................ CCACGGGGACGACTTCGGCCAATGGACCTCCGA 41550 28 100.0 33 ............................ CTTTACAAGTTGGCCCAAAAGTTCAGCGGGTAC 41611 28 100.0 33 ............................ CGATACTGCTGCTAATCTGTTAGCGGAGGAAAA 41672 28 100.0 33 ............................ TCATTTTGTTAAATTTGTTTACTGAATAATTTT 41733 28 100.0 33 ............................ TAATCAAACTTGACTAATTCATTTTCAAAAGTG 41794 28 100.0 33 ............................ TCAGATTGTCCATATCTGCTCTCTGGCGCCTGC 41855 28 100.0 33 ............................ TATGTTTGAACTACTTGACGGGGCGGCCTTTGC 41916 28 100.0 33 ............................ CTGAAGTATGTTGCCGTTGCATGCACTTCAGCA 41977 28 100.0 33 ............................ TTAAATCGAGGTGGTCAAACGTTGTACTTTAGT 42038 28 100.0 33 ............................ TATGCACATTTGCAATCTTTATCTTAAAAGGAG 42099 28 100.0 33 ............................ CACAGCGAGCGTTATTGCCCAAAACATAGTGTT 42160 28 100.0 33 ............................ TACTACAGCTTAAAACAAATTTTAAAGCGAAAA 42221 28 100.0 33 ............................ CATCCCGCAACTCCTTGACGGGGCGGCCTTGGC 42282 28 100.0 33 ............................ TCCGTCTTTATACTCTTTATAGGCCTTTTTCGG 42343 28 100.0 33 ............................ CTTAACCATGCAAGAAGATGAAACCGGGCTCAA 42404 28 100.0 33 ............................ CTTTATAACTCTTGGTTTCGTGCCCACTACAAG 42465 28 100.0 33 ............................ GAAAAAAGCCCGCTCAGGTCAAAAGCGAGCACA 42526 28 100.0 33 ............................ TGTTAGTGCAGGCATTTATAGAGAAGAAAAGAA 42587 28 96.4 33 .....................A...... TTATAAGGAATTCAACGGGAACAAATTAACTAG 42648 28 100.0 33 ............................ TTATTGTAATTGCTGCCGGGGCTTATGCCCTCG 42709 28 100.0 33 ............................ TGTTAGAATGGGCCAGTACGCTATCTTTTTGTG 42770 28 100.0 33 ............................ TCATAGTTAAGGGGGATGCAGAAAATGACCAAT 42831 28 100.0 34 ............................ TATCCTTAGTCATTTTTTCCTCCTTATTTTTTTC 42893 28 100.0 33 ............................ CTTACGGTAGATCAGACGATACTGACAGCCAGG 42954 28 96.4 33 ..................A......... TGTTCTTGCCCAGAATGATAAACTCCTGCCCGA 43015 28 100.0 33 ............................ TTTGCTGTCAGTGTAGTGATCGACGGGGAACCA 43076 28 100.0 150 ............................ TGGGGGGCGTAGTACACCACACTGTTATAGATCTATTTTACTTAATCGGCTGTGATCTCACTGCCATTAGTGAGTAACATGGGGCGAAACAATATTCCTCACGTATGTGAGGAGAATTCTTTCTTTATGCTATTGTGTTTTTCGTACTGT 43254 28 78.6 0 ...........AT.T.C....A.....A | T [43260] ========== ====== ====== ====== ============================ ====================================================================================================================================================== ================== 42 28 98.6 35 GTATTCCCCACGCAAGTGGGGGTGATCC # Left flank : GGACTGAATACCGAAACTGATCAGATTTTGTCTATTGGCGCGGTGAAACACGATGGTACAGAATTCTACCGACTGATCAAGCAAGATATTGATGTGCCAAAACAGATAGTGGAGCTGACCGGGATCACTTCTGAAATGCTAAGTAAGGAAGGCGTTCCATTGCAAGATGCATTGGAAGAACTGACTGACTTTGTTGGAAATGTACCAATTGTTGGGTACAATTTTAGATTTGATTCTGCATTTTTGAATAGGGATTATCGGAAATGCGGGATGCAAGAATTGAAAAATGAGATCAAGGATTTACTGCCAGTTGTAAAAAGAAAAGAAAAATTTCTGGACAACTATAAGCTACAGACTGTATTATCAAACTACGGGATCGAAAATAAGGTGCCGCATAACGCTGTGTCTGATGCAAGGGCTACGAAGGAGCTGGCGATGAAACTAATCAAAAATCGCATTCTGGTGATTTGAGAATGGCGTCGCTAAAGGGATCCATTACT # Right flank : ATAAGTTTCAGTTAAAGCACCAGCAAATTTCAAGGATCTTTGGTAGAATAGAGGTAATAGAGAAGGAGTGAGGAACAAGCATGAGCATTTACGGTAAGTACGCCGATTATCTTCCACAGATCCTGGATTCTGTTTTGCAGCAAATCCAAGGCATCGGTCAGGAGTATAGTGCAGAACACGGGCAAAAGCTATATGGGCACCTGGAAGGTCGCGTCAAAGGCGAAGAAAGCATGGCGCAAAAGTGCGAGAGAAAAGGTTTGCCGCTGATGCCAGAGTCTGCATTGATCGAAAACCGGGATGCGATCGGCCTCAGAATCGTCTGCAACTTTATTGACGATATCTACACTTGCATTGACTTGTTGAAGAAGCAGGACAACTTCAAGATCATTAATGAAAAAGACTACATTACCGATGCCAAGCCAAACGGCTACCGGTCATACCACTTGATCATGGAAGTAGTCACTCCCTTTGAAGACGTCCATGGCAACAAGCCTGGCATC # Questionable array : NO Score: 5.87 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.31, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCAAGTGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTATTCCCCACGCAAGTGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.30,-10.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //