Array 1 651749-651259 **** Predicted by CRISPRDetect 2.4 *** >NZ_UAVV01000002.1 Clostridium fallax strain NCTC8380, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 651748 29 100.0 37 ............................. GTACAAAGGTTTTTAAAGCTAATCTAACAGTATTAAG 651682 29 100.0 37 ............................. AAAATGCAAAAACAATTAGATATTGTTAAAAAAGACG 651616 29 100.0 37 ............................. CTAAAACTGTTCCTACAATTCGAGATAGCTCAAATTT 651550 29 96.6 36 .........A................... TAAAATATTAAAAATATATTGTGACCCTGCTTATAA 651485 29 100.0 37 ............................. AAAATGCAAAAACAATTAGATATTGTTAAAAAAGACG 651419 29 100.0 37 ............................. AGAAGGTGTAAGGAAAGGAATTACAAGGATGAATAAA 651353 29 100.0 37 ............................. CTAATATATTTAGAATATATATTATACACCTTAATAT 651287 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ===================================== ================== 8 29 99.6 37 ATTTACATTCCTTATAGTTAAGATAAAAC # Left flank : AATAAGCCTTACCTATCTTGTCATTTATTTTATTCATAACATCATCAATAGTATCCATTAACAGTGCAAGACTTTCAGAAATATCAATTGATTTATCTGGGAAGTCTTCCTTTATTAAATTTAAAATTTCTTCAAGTTCCATAAAAACACCTCACATTATATAATTACATTATTCTTCATAAATGTAATTACTCCTCCTTTTCTCCAATAATTTATACAAAAAAAAACACCAGATAATATTTATATATAGTGTTCTACAGTAATTGCACTTCTACTTTTTGACATAATACTTAATTTTCTTAAATTTTCTTATTTCTGCTAAGCTCATTCCTAACTTAAATAATTCTACTATCATATCTTCTATTCTTTCTCATAATAGATATATCCTTTCTTAACTAAATATTATTTTACTTAGTTAGACTTAATATGTTATAAATGTAAAATTGGAAATATTATCATTTATACTTTTTAAGTAAACTTATATTAAAATTCACTAATTT # Right flank : CCTAAAATTCTATATTAAATAACAGCTTAAAGAAGCCATTTCTTATGTTGATATTGTACCATATTTAATATTCTTTTGCAGTAAATCTTAAGTAATATATTAAGAATAGACTTATTAACCCTTCTAATCTATTTATACATAACGTTTTAGAAGTATTTCTTTAAAAATTCGATCTACTGCATTCATATTTTTCCAAAAAATACTTTAAGTTAAATAAATCCAATTTTTTAAATTCTAATCATTAGAAAATTCTTAAATATATTATATTCATATTTCTTTAAAAATTTATATCCGAGCCGTGTATTTATTCCATTCTAACCTATAAGTTTAATTTTAAAATCTTAAACTTCATTTCATATTTTCTTAAAAACACTAAAAGCCCTTGAAATCAAGAGCTTTTCATTGTATCAATATTAAATTGATTATTTGGAGGCGCCACCCAGATTTGAACTGGGGATAAAGGTTTTGCAGACCTCTGCCTTACCACTTGGCTATAGCGC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTACATTCCTTATAGTTAAGATAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.50,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [73.3-86.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,0.64 Confidence: LOW] # Array family : NA // Array 2 934835-933816 **** Predicted by CRISPRDetect 2.4 *** >NZ_UAVV01000002.1 Clostridium fallax strain NCTC8380, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 934834 30 100.0 36 .............................. TCGAAAATGTAATCTAACATATTATATTTTTCTTCA 934768 30 100.0 36 .............................. TAATGCAGATGCATTTTTGCAAGAGTTGGAGGAATT 934702 30 100.0 37 .............................. TAGAGATGTAAAAGTATCTATTATACCTTTAAGCTCG 934635 30 100.0 34 .............................. TAAATATAACTGGAATTGCTTGAATAAATAATAT 934571 30 100.0 37 .............................. CTCTTGTAAAGAGCAATTAAGGAATATTAGACAAATA 934504 30 100.0 36 .............................. GATTAGTGAGGAAGATGAAAATTTAAAAAGTCCTTT 934438 30 100.0 36 .............................. AACAATTAATTATGGAACAAGATCATTAAATAATGT 934372 30 100.0 35 .............................. AGCGAAAAAATGTTTTAACGAAATACAAAATATGA 934307 30 100.0 36 .............................. TATGTTCTGTTGTAAACGCTGAATGTGACTTATTAT 934241 30 100.0 37 .............................. TAGAATCTACCTCCTAAACAATGTTTTATTATTTCAG 934174 30 100.0 36 .............................. ACCATTTCTTGTACTGGAAATTTAATAGGTCTACTT 934108 30 100.0 35 .............................. TCTTAATAAATTCTTTATCCATTTCCTTTTTTAAG 934043 30 100.0 35 .............................. CAGAATGTGCAGAAAACTATATATTAAATAATTAC 933978 30 100.0 36 .............................. GTAGAAATATTAGGAAATTATAACTGTAGAACTGGT 933912 30 100.0 37 .............................. ACAGAACGACACAGAAACGACTTTACTTAATAACCAT 933845 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 16 30 100.0 36 GTTTAACCTTAACATGAGATGTATTGAAAT # Left flank : TCTTGCAGATTTAGTTTTATCAAAAAATTTATAATATGTGCTCCTGGCTACGCCTAGAACGGTACACATAGTCTTAATATCATGGTTGTTTTTATTACTATCTATAAATTCTATTACGTGGTCTAATTTCTTGTTGCAAATATGGCCATAGCTTTTTTTAATATTTCATTTTCCTCTTTAATCTTTGCCATTTCTTTCTTTAAAGCTTTAACTTCCTTCAAAGTCATAACTTCATTTTCATCCACTTTAATTTCCTTTATATCTTTGATCCAGCCGTTAATTGTTGATTTTGCAATGCCATATTCGCTACTTAGCTCAGCCAAGCTCATTCCTGACTTAAATAAGTCTACTATCATGTCTTTATATTCTTGATCATATCTTCTGCCCTTACTCATAATGGACACATCCTTTCTTAACTAAATATTATTTTACTTAGTTCGACTTAATGTGTCCACTACTTTATACTAACACCAATATGCGAACTGATTTGATAAATTTTG # Right flank : GTACTTAATTTTGCTGCTGCTATCCCTTTCGAAGGTTTAACCTTAACATAAGGTGAACAATATTGAGTTTTTAATTTTTATATTTAATTATAAAATTAAGATGCTTTATTTAGATTAGTTAAATTATTTAAGTACTTTCTAAAAATATTTATTATTTAATATTGTATAAATAGAAATATTTTGTATACATATTAGAGATTAAAACGTAATAATATTAGAAGCTCTAGAAAGTTAATAATTACTTATTGTACAAATTATTTTATGAAGGGAAAGATGATGGATAATGAACTAATTAATAAAATTTTTAAAAAGAAAATGATTATTATATATAAATATTTGATTAAAATTGGTTGCGACGAAAATGATGCAGAAGACATAGTACAAGATACTTTTTTAAAAGCTATTAGATATATTGATGGTATAAATGTAGAAAAAATATCTTCTTGGCTTTTTAAGGTTGCAGTTAATAAATATTATGACTTATGTAGAAAAAATAATAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAACCTTAACATGAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 3 937531-936117 **** Predicted by CRISPRDetect 2.4 *** >NZ_UAVV01000002.1 Clostridium fallax strain NCTC8380, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 937530 30 100.0 35 .............................. GGGTGGTAAAAGATATGGAATACTTTATGCTGGTA 937465 30 100.0 36 .............................. TTGGTTAAATACAGCAAAGAAATTAGATGCTAGTTC 937399 30 100.0 36 .............................. TAAATAAAAAAAGGCTACCTGTAAGGCAACCTTAAA 937333 30 100.0 35 .............................. TTTTTCTAACATGGAATAATATTTAATTTAAAAAG 937268 30 100.0 36 .............................. TTAATAATTTAATTACTATGGCAAAACCTTCTATGC 937202 30 100.0 35 .............................. GATATGAAGAGTAATAAAGACTATATAGCTGATAT 937137 30 100.0 36 .............................. TGATATAGACAAAAGTGAGATAGTAAGAATGGCGTT 937071 30 100.0 37 .............................. CTATCTTTGCCAAATGCAGATACACTTGCACTTGCTA 937004 30 100.0 36 .............................. AACATTTAAACCACCTACATAAACTTAGCAAATTTA 936938 30 100.0 37 .............................. AAGAACTCTTGTCTTGTAAAATTCAATTGTGTTTTTG 936871 30 100.0 36 .............................. CAACCTAAGGAATCTGGGTCGGCTAATTTACTAATT 936805 30 100.0 36 .............................. AACAAAGATTAAGTGAAGTTTATTGCTTGAATAGAA 936739 30 100.0 35 .............................. TGGAGCAATAGTGTCTAACCTTCATTCCGTCAATA 936674 30 100.0 36 .............................. GAAATATCTAAGTCTAGAGTTTTATTAGTTCCCATT 936608 30 100.0 36 .............................. TATTTTAAATATGATGATGATGAGTTTTCTGTCAAA 936542 30 100.0 35 .............................. CAAGATCCTTTAATAAAAGTCTTAAAAGGGGATGA 936477 30 100.0 35 .............................. TTTTATTCCTCCTTCTGTTCTTCTGTATCTTTTAC 936412 30 100.0 37 .............................. ATATCGAATATAATAAAAGCATAGGAAATATTCGATA 936345 30 100.0 37 .............................. TAATCTCCATATATAAACATATTAAATTCCTCTATTC 936278 30 100.0 35 .............................. TTTTATTCCTCCTTCTGTTCTTCTGTATCTTTTAC 936213 30 100.0 36 .............................. TACAATATTAAGTAACAATAATAATTTAAAAATTAA 936147 30 80.0 0 ......................C..ATGTC | G [936121] ========== ====== ====== ====== ============================== ===================================== ================== 22 30 99.1 36 GTTTAACCTTAACATGAGATGTATTGAAAT # Left flank : TTCTTTAAAGGAGAATATGTAAAATGGCATCTAATAAAAATATAAATTATAATTATGCTTTTTTATTTTATGATGTGGGAGAAAAAAGAGTTAATAAAGTTTTTAAAGTATATAAAAAATATCTTAGTCATTTTCAAAAATCTGTATTTAGAGGAGAGATAACTCCATCCAAATTAATGAGTTTAAAAAGAGACTTAAATAAAATTATAGAAAAAGAGGATGATTTTATATGCATAATAAAACTTCTTAATAATAATGTTTATGGAGAAGAAATATTAGGAAGTTGTGATGATAATGGAGAATCATTAATCTTATAATTTAATTTATCCCAAGCTAAAATAACTTAACTATTGTTTAAACATTGACAAATACTTGTTTTTCACAATATTATATATTAAAATTAAAATGTAATAATTAACTTGGGATAAATATTATATTTAATATTGAATTATCTATGTTACAAGAAATTGAATAATGTATAATTTGGCTTGTTTTCAGTG # Right flank : AATATTTTGGACACAAAAAGTCAAACTTTTTCATGCTGCACTTCTAGCTAATAATTCACATTGATCTGGAGTCATGTAATTAATAGAAGAGTGTATCCTTTTTCTGTTATACCAACCTTCAATATATTTAAATATAGCTATATTAGCTTCTTCGAAGGTACGGTATGTATTTCTATATATTTCTTCCTTCTTTATTGAAGAATGGAAAGATTCTATACAAGCATTGTCATATGGGCATCCTTTTTTACTAAATGATTGTGTAATATTAAATCTTTACACAGTTCTTTTAAATCATTACTAGTGTATTGGGAGCCTAAGTCACTATGGAATATTAGCTGCTTATTCTTATCAGGACTTTGGCAGTAATAAGCATTTTTTAAAGCTTTAGAAACTAAATCATTGGTCATCCTTTTACCGAAAGCGTAGCCAATGATTTTTCTAGAGTGTAAATCAAGAACTGACGCTAAATAGCACCAACCATCTGTTATAGTATGAATATA # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAACCTTAACATGAGATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 4 1033511-1033997 **** Predicted by CRISPRDetect 2.4 *** >NZ_UAVV01000002.1 Clostridium fallax strain NCTC8380, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 1033511 29 100.0 37 ............................. ACTATATTTCTTTTAAATTAATACTTGCTCCACGTAC 1033577 29 100.0 37 ............................. GATTAATAAAAGCAGGTAGTGGAGTAGCTAGTTTCTT 1033643 29 100.0 36 ............................. ATATCTTCTTTTCTCATTTAATCCCCCTGTTTAAAA 1033708 29 100.0 36 ............................. TGAAGTTAATTCTGATGTAGCTGAAATGTATTTGTA 1033773 29 100.0 37 ............................. ATACGTTGACAGCTTTTGGATTATCTGCAAAAGACGC 1033839 29 100.0 36 ............................. TTTGCAAGAAATTGTGAAATGGGCAAAGATAGGTGT 1033904 29 100.0 36 ............................. TTTAAAATTAATTTAATATAAACTTTCATTTGCATA 1033969 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ===================================== ================== 8 29 100.0 37 ATTCATATTCTATATAGTTAAGTTATTAC # Left flank : TTGAAATGGAATTTCATCAAGCCTTGTATACATATCTTCCACATAATGATTTTTAAATTGCTCTGATAAGTTTTTAGTTTCTAATTCTAATTCTACTTTTTCATTTTCTAATATTTTTATCTCATGTTTTAACTTATTTATATCTGATTCAAATTTTAAAATTTTCTCTTCTTCTAGCTTATTATTTTCTTTTTTTATCTTATCTTCCATATAATAAATTTTTTTCTTTTTTTTATTAATTTCATTATTTTTATAAATAATTTTAGTACTTTCTGCTGTATTTAACATATGATCTGCTATTAAAAATGCCATTCCATTATTTAATGCTCTATATTGGTTATATTGCTCATCTTTTATCCATTTTAATTGCTGTATTCTTAATTCTTCATCTGCCATTATAGATAATTTTAATTTTCTAACTGTTATCAAAATTAAGTACTCCTTTTATATAGCTAAATTTCTAATTTATAAATCAGTTCGTATATAAAAATCTTTGAATG # Right flank : CCCTAATGTAAATATAGTTATAGTGCTATTATTCATCTTTAAAACGAAAGTTTTTGCAGTAATTCTATAGTAATATTTTATTAACAAAATTAAAAATACATGTAATATATTGATGCAACTAACTTTAAGGCATATTTAATGAAAATTTGATTTACTGCAAAATTATTTTTTAGAATAGTATGTCGGTAACATATTGACATACATTAACCCTTTTGCCGAGTGATATAATCCTCTAACCAAAGACGTTGAATCGCCTTAACTTGTTAAATATTATTTTCTTTTTAAATGATTAAAAGCATCTATAAAATTGTTAAATAAATTTTTCGTTGATATTAAATAATATTTATTACTATTATCTAACCTACACCATAAAGCAGTTTCTCTTTTATTAGGTTTAATTTTAATTGCTTTATAAATATGATTTTTTCTTATTGCATACACTTTAATCACTCCAATTTTATTACTATCTATAATAATTGACTAATAAATTAGATTTTATA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCATATTCTATATAGTTAAGTTATTAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:82.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [80.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //