Array 1 187984-189669 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKQH01000012.1 Limosilactobacillus reuteri strain 121 scf7180000000039quiver, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 187984 36 100.0 30 .................................... GAATCATGGATTGATGCTTCTAAGATTCGC 188050 36 100.0 30 .................................... CGCTATTCAATAATTCATTCACTTTATTCG 188116 36 100.0 30 .................................... AGCTCGTCGCTTTACGCTGACGTTAAGATA 188182 36 100.0 30 .................................... GAATGGTGATTAGTATGAGTTATTTACAAG 188248 36 100.0 30 .................................... GTCCACGATAAAGCAAGCCATAATGTGCAA 188314 36 100.0 30 .................................... TCTTCGTCCGTACATTTAGTAATGTGATAT 188380 36 100.0 30 .................................... GACGGCTCGCTGTCTGCTGTTTCAACACTA 188446 36 100.0 30 .................................... CTTTCTTGCGTCAAAACTACTTCTACATCT 188512 36 100.0 30 .................................... GAGCAAACAGTGACTAAACCAAGTGATGAT 188578 36 100.0 30 .................................... CTAACTAGCATTCCTCTTCGCTCTTGCTTC 188644 36 100.0 30 .................................... AGGCTTATGTCTTACGTAAGCTGGGAACGG 188710 36 100.0 30 .................................... AATCAAATATGGCAAATGAAGTAACATACA 188776 36 100.0 30 .................................... TACGAGTAATCGTTGATGACACACTGCCTG 188842 36 100.0 30 .................................... CCATCGTACATAAAATCAATATCAGCCTTG 188908 36 100.0 30 .................................... TAATAGCTCTATCTATGACTCATTTGGAAA 188974 36 100.0 30 .................................... TAGATGCTGATATAAGCACTGAGCAATACA 189040 36 100.0 30 .................................... TTGTTCGAGTGTTTGGCGAATGTGAAGCAG 189106 36 100.0 30 .................................... AAGATCGTACCCAAGCATTGATTGAAGCAA 189172 36 100.0 30 .................................... CATCATTAGTAACCCACCATATTCAGCGGG 189238 36 100.0 30 .................................... TTAAAAGAAAAAAAGATAAGCCAGTATTCT 189304 36 100.0 30 .................................... ATTAATGACCAGAGCCGTTACAAAAATTAT 189370 36 100.0 30 .................................... ATGTTGGAAAAATGAATTAAGGAGTGAATA 189436 36 100.0 30 .................................... AATGTTTGTGGTCATGTACTACAGATGAAA 189502 36 100.0 30 .................................... TAAATGACGTGACTGGTATTCATGGCTCAC 189568 36 100.0 30 .................................... CTTTGACCAGTTACATATAGCGCATTAACG 189634 36 91.7 0 ........................G...A......T | ========== ====== ====== ====== ==================================== ============================== ================== 26 36 99.7 30 GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Left flank : GAATAATAATTTAGCAACAATTTATTCAACGGAAATTGTAAAGTCAATAATAAAAAATTTAACAGAAGAGGATCGTCATTTACTAGATGCTGAAGCACGTCGACTTTATTCGAATGTTCAAGAAATTTTATTTATGACAGATTTACCGCTCGAAGTTCGCTATGATGGTGATATCAAACGATTATTAAATTATTGTAAGATTAAATTTTCACCATTAGTTCAGCAAAGTCCTTATGATATAATAAAAACAGATTTAAAGTTACATTTAGAATGTGCTGATAGTTCATGTGTTGGGTTAAGTAATGTCGCTAATTACCTAGATTCAGCTCAATTTAACGAACTACAACAACTAAACATTGAATTGAAAATTCCTGTTTTATTAATAGAATTCACAGAAATAGATAATCGTAGATACTATGGAAATGCGAATTTTTATTATATTGACAGGGATTTCGTTGATTGGAAGTTATAAACTATTAATTCAAAATTAGAAAATAATG # Right flank : TAAATATTAGTCGAACTCACGGCTGAGAAAAATCTTAAATATGCTTCAAATTTCCCCGCCAACTTCAGCGGGGCTTTTTCATTTTCTTTTCAAATTAGTGTATAATATTTACTAAACCTATTACTAAAAGAGGTGAAAATAATGGCAACAATTAAAGAAATTGCGAAAAAGTCAGGGTACTCACCAGCAACGGTTTCGCGCCTTTTGAATAATGACCAAAATTTATCGATCAGTCCAAGCACCCGCAATAAGATCATGACGGTGGCTAACGAGCTTGGCTATTGGAACAGCCACAAGAAAAACTCTCAGCAGCAACCAATTCGTCCTAATCTTGCTCTATTGTATCGGGTAAGCGGTAAAGAACAACTGCAAGATGAATATTTTGCGTTTTTACGCAATGCAATTATTAAAGAAGTCGATGAAGCTGGAGCGCAGGTTGAGATCTTTAGTAATATCAAAGATTTAATTGCGGCGGCTGATTCGTTCCAAGGATTTATTGG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA // Array 1 6843-8523 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKQH01000004.1 Limosilactobacillus reuteri strain 121 scf7180000000031quiver, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 6843 36 100.0 30 .................................... GAATCATGGATTGATGCTTCTAAGATTCGC 6909 36 100.0 30 .................................... CGCTATTCAATAATTCATTCACTTTATTCG 6975 36 100.0 30 .................................... AGCTCGTCGCTTTACGCTGACGTTAAGATA 7041 36 100.0 28 .................................... GAATGGTGATTAGTATGTTATTTACAAG 7105 36 100.0 30 .................................... GTCCACGATAAAGCAAGCCATAATGTGCAA 7171 36 100.0 30 .................................... TCTTCGTCCGTACATTTAGTAATGTGATAT 7237 36 100.0 30 .................................... GACGGCTCGCTGTCTGCTGTTTCAACACTA 7303 36 100.0 27 .................................... CTTTCTTGCGTCAAAACTACTACATCT 7366 36 100.0 30 .................................... GAGCAAACAGTGACTAAACCAAGTGATGAT 7432 36 100.0 30 .................................... CTAACTAGCATTCCTCTTCGCTCTTGCTTC 7498 36 100.0 30 .................................... AGGCTTATGTCTTACGTAAGCTGGGAACGG 7564 36 100.0 30 .................................... AATCAAATATGGCAAATGAAGTAACATACA 7630 36 100.0 30 .................................... TACGAGTAATCGTTGATGACACACTGCCTG 7696 36 100.0 30 .................................... CCATCGTACATAAAATCAATATCAGCCTTG 7762 36 100.0 30 .................................... TAATAGCTCTATCTATGACTCATTTGGAAA 7828 36 100.0 30 .................................... TAGATGCTGATATAAGCACTGAGCAATACA 7894 36 100.0 30 .................................... TTGTTCGAGTGTTTGGCGAATGTGAAGCAG 7960 36 100.0 30 .................................... AAGATCGTACCCAAGCATTGATTGAAGCAA 8026 36 100.0 30 .................................... CATCATTAGTAACCCACCATATTCAGCGGG 8092 36 97.2 30 T................................... TTAAAAGAAAAAAAGATAAGCCAGTATTCT 8158 36 100.0 30 .................................... ATTAATGACCAGAGCCGTTACAAAAATTAT 8224 36 100.0 30 .................................... ATGTTGGAAAAATGAATTAAGGAGTGAATA 8290 36 100.0 30 .................................... AATGTTTGTGGTCATGTACTACAGATGAAA 8356 36 100.0 30 .................................... TAAATGACGTGACTGGTATTCATGGCTCAC 8422 36 100.0 30 .................................... CTTTGACCAGTTACATATAGCGCATTAACG 8488 36 91.7 0 ........................G...A......T | ========== ====== ====== ====== ==================================== ============================== ================== 26 36 99.6 30 GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Left flank : TAGTTGCGAATAATAATTTAGCAACAATTTATTCAACGGAAATTGTAAAGTCAATAATAAAAAATTTAACAGAAGAGGATCGTCATTTACTAGATGCTGAAGCACGTCGACTTTATTCGAATGTTCAAGAAATTTTATTTATGACAGATTTACCGCTCGAAGTTCGCTATGATGGTGATATCAAACGATTATTAAATTATTGTAAGATTAAATTTTCACCATTAGTTCAGCAAAGTCCTTATGATATAACAGATTTAAAGTTACATTTAGAATGTGCTGATAGTTCATGTGTTGGGTTAAGTAATGTCGCTAATTACCTAGATTCAGCTCAATTTAACGAACTACAACAACTAAACATTGAATTGAAAATTCCTGTTTTATTAATAGAATTCACAGAAATAGATAATCGTAGATACTATGGAAATGCGAATTTTTATTATATTGACAGGGATTTCGTTGATTGGAAGTTATAACTATTAATTCAAAATTAGAAAATAATG # Right flank : AAATATTAGTCGAACTCACGGCTGAGAAAAATCTTAAATATGCTTCAAATTTCCCCGCCAACTTCAGCGGGGCTTTTTCATTTTCTTTTCAAATTAGTGTATAATATTTACTAAACCTATTACTAAAAGAGGTGAAAATAATGGCAACAATTAAAGAAATTGCGAAAAAGTCAGGGTACTCACCAGCAACGGTTTCGCGCCTTTTGAATATGACCAAAATTTATCGATCAGTCCAAGCACCCGCAATAAGATCATGACGCTAACGAGCTTGGCTATTGGAACAGCCCAAGAAAAACTCTCAGCAGCAACCAATTCG # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATGTACTTCAAATCAATAATGTTTAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //