Array 1 15416-17004 **** Predicted by CRISPRDetect 2.4 *** >NZ_BDEU01000108.1 Acetobacter pasteurianus NBRC 3277, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================== ================== 15416 29 96.6 31 ............................C TGCTGAATGTTGCCGGTCTGCTGTCAAACGT 15476 29 100.0 31 ............................. TGATGAACTGGCCTGAACTGCAAACCGTGCA 15536 29 100.0 31 ............................. GAACAACCCTTGTTCCGTCCCTGCTGAATGT 15596 29 100.0 31 ............................. TTATGGACCATCAGGGAGCCGGAAAAGCCCC 15656 29 96.6 31 ............................A GTGGGCGATGCAGAAGCAGATCGCCGGGTAA 15716 29 100.0 31 ............................. TAGGCTATGGCTGTGGCGGCTTTCTCACCTA 15776 29 96.6 31 ............................T ACCCTGCGGCCATGAAAAACCTTGAACACCC 15836 29 100.0 31 ............................. TTCCGCTTCCCATTTTTCGCGTGTTGCTTCG 15896 29 96.6 31 ............................A GCGTCTCAAGAACGTTAAAGAAGTGTCAACA 15956 29 96.6 31 ............................C GCGTGATTAACCGCGCTGTGCAGGAAGGGCG 16016 29 96.6 31 ............................T TGTCCGTTGCAATGGATACTAGAGCGTTTCC 16076 29 96.6 31 ............................A TTCCATGCAGTTTGCAACACACCGCTTTTTA 16136 29 96.6 31 ............................A AGACCCGCGCTTAAAGTTTGATGAACAGAAC 16196 29 96.6 31 ............................A TGCAGGGGCTTCCATTCGTAAGCTGACACCC 16256 29 100.0 31 ............................. AGCGGTTATCTTGGCTGCACGCAGCTACTCG 16316 29 96.6 31 ............................C TTCTCGGCATCGTATGTATAGCGAGCCGTGA 16376 29 96.6 31 ............................T AACGGCAACGATCTAACGGCAACGAACGGGA 16436 29 96.6 31 ............................T GACGGCTCTATCCATGATGTCCAGATGATAA 16496 29 93.1 31 .............C..............A TTCAAATGCCCATCAGCACGCACATACGTTG 16556 29 89.7 31 ...C.........C..............A CTCCACACGGGCGTAATGGTCTCCTGCGAAT 16616 29 96.6 31 ...C......................... GAAGTGCCAGAGATCACGCCAGAACAGGCAC 16676 29 96.6 31 ...C......................... ATTATGGTAACGGCCACGCCCCGGCTTACCG 16736 29 93.1 31 ...C........................T GTCGCGGGTACGGTAGAGGGCATCTGCTGCC 16796 29 96.6 31 ...C......................... CTACAGCACGGCGACCCCGCGCCTGCCACAG 16856 29 93.1 31 ...C........................A TCAGGCAAATGGTAATCCAGTTCTGAACTGT 16916 29 93.1 31 ...C........................C TTGGTTGATGCTGAAGCTCCCTCCGTGCAGA 16976 29 93.1 0 ...C........................C | ========== ====== ====== ====== ============================= =============================== ================== 27 29 96.5 31 CCAGACCGCCGCATAGGCGGTTTAGAAAG # Left flank : AAAATCAGCTACTCCTGACGTACCTGCAAAAAGAGGCGTTCCGCCGCCGGCGCTAAACCCGATCATTACACCCGCCTTCCCAAGTTCTCGAACGGCGGCTTGCGTTATCGAAGTTCCTGGGCCGAGGAGTAACGTTGTGGTATTGGCAATCGGCACATTCCAATACAACCTCTTCTTGCCCGCATCCGTCACATACTCAACGCGCCCTCCATTCACGAGTAAGCGGCAATATTCCAAATAATAGATGTTGGCGCGTTTGGAGTACATAATGGTCTTGAGAGATGAAGGAGAAATTTCGTCCATAAGAAATATTTCCAAACAACATGCTCTTAACGTGAAAGCTCAATCCTAGCATTTTTCCACTTGATAAGACCCTTTTTTTTCGTTACCCAGAAATCTCTTAAAAACCAATGAGTTGTAAAATGCCTCAAAAAAAGGGGTAAAGGCTTATTGGATGATCTTTTGGCGGATTTCCGCCGCACATTGTGAATATTGTTCTA # Right flank : CAACTTTGCAATCCCGACACCTCACCGGCTGGCTCAGCTCTTCAAGATAGCAGCACGGAATCTGTAAGTGGACTTGATGTAATTGAGAATGAGCCAGAAGGCGATAGTTTTACGCCATAGTTCCAAGGAGGGGTGAAGGCCAACTAGACAGCCACATCACCCCTCCTCTGTTCTCACTTGGAAAATATGCCTTATTGCCTTTCCCATAAGTAGACGCACTTTCGAGTTTCTGAACGACCGTGAGCCTTCATCTGTTGAGAACTATTGCCTTTTCCTACAGGTAGAACCCAAATCTTGAGACACTTGAAGCCAAGTTTTTCGGCCATGCTTGAGAGGATGCAATCCACTGGAATAGTAATTCCATTGTAACGGACGTTGTCATTTACCATATAAACTTTTCCGTGGCGCTTCATAACTAATGCTAATTGATAAATATGAACTGCCATTTCAAAGAAATAGCACTCAATCATCCCTATGACGGCGTTGTTATTGAGGCGATG # Questionable array : NO Score: 5.38 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAGACCGCCGCATAGGCGGTTTAGAAAG # Alternate repeat : CCACACCGCCGCATAGGCGGTTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACCGCCGCATAGGCGGCTTAGAAAT with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.70,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //