Array 1 265409-264092 **** Predicted by CRISPRDetect 2.4 *** >NZ_WDOH01000005.1 Bifidobacterium bifidum strain BIOML-A5 scaffold5_size336598, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 265408 36 100.0 28 .................................... GTGCCGGGCACCTCGCGGTGCAGCACGA 265344 36 100.0 28 .................................... ACAAACACATTCGTTCGCCCTTGCGGTT 265280 36 100.0 28 .................................... CAATAGGCGACCGTACGGACGCAATCAG 265216 36 100.0 28 .................................... AAGGTGTTCGAGCAGCATTACGTCTATA 265152 36 100.0 28 .................................... GTTTCATAACGGTAATCGGCGCGTTTTT 265088 36 100.0 28 .................................... AGATAAAGCGCCTACACGGGATGTCCAC 265024 36 100.0 29 .................................... CAACGTTAGCACATGGCTACGAAGTACGA 264959 36 100.0 28 .................................... CTTTGCGGCTGGCTTCCATGCTGCATTT 264895 36 100.0 28 .................................... TTGTGTGGTGTATTTGTATTTGTATGTC 264831 36 100.0 28 .................................... CCATTTCACCGCCTGATATTTGCTTGAT 264767 36 100.0 28 .................................... TTAACGATGTTGTGAGCATGATCGGTAG 264703 36 100.0 28 .................................... TCATCCATGCGACACCGTTGACCATGAC 264639 36 100.0 28 .................................... AATAGTGATATCTTGTCTGGCAGTCCGA 264575 36 100.0 28 .................................... CCAAGGACGCGACGTTATCCACGACAAC 264511 36 100.0 28 .................................... TCAACTCGGTCAACCATTATCTGCATGT 264447 36 100.0 28 .................................... ACCGCTTCGACATCACCGTCAACGGCAC 264383 36 100.0 28 .................................... TCGGCAACCAGTGGGCGCTGACCCTGAA 264319 36 100.0 28 .................................... ATGGACTGACTATATCAATACAACCACG 264255 36 100.0 28 .................................... TTCCTGCGACGGCGCTGGCGCGTCGTCT 264191 36 100.0 28 .................................... CCGTTTGGAAACCCTCGTGTGCGAAACT 264127 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================= ================== 21 36 100.0 28 CAAGTTTATCAAGAAGGGTAGAAGCTAATTCCCAGT # Left flank : AGTTTAATTCATCCGGTTTGACGATACCAAGTTCGGTAAGCGATTTCGCGCAACAGTTTGGTCTGTACTGTGAGAAGAGGATCGATTCATTGGTGGTACCGGAATATCAGGGTCCTTATGAAAAAAGATGAGGACAGTGGTGGCATGTGGTGCTTGGTGATGTTCGATTTACCGGTGAAAACGAAATCGCAACGCCGTGAGGCAACGAAGTTTAGGAACATGCTTTTGGATATGGGCTATAGCATGGTGCAGTATTCCGTATACGTAAGATACACACCGACTCAGGCAGGCAACAGATCGACAGTAATCGCGATAAAGGAGAATCTTCCAGCTGAAGGCATCATACGGGTCCTCCATATCGGTGACCATCAATGGTCGACCTCATTGCGTTTTTCCAGCTCGAAACGGGTCACAGTCGATGAGACGCCGGATTATTTTACGCTTTTTTGAATAGAAGAAATCTAATAAAAGGCGGAAAATAGCCCTTCTTGATAAGAATA # Right flank : TTATTTATCGTGGTTGGCAGCATCTCTCGGTAGTGCCCGAAAGGTTGCGCACTTTGGATCATGCCCGCCCATGGCGCGATGACCGGTTCGCTTCCTGCAGATTGTCACCGAGCCGGGACATGTCGAGGTAACGCCGGTTGGACCATTCGTTCGCGGTGACGTACCTGATGCGCGCACAGACGAGCATGAGCGCGCCGTTCCCGTCCGGGAAGCTTCCCACGACGCGAGTGCGCCGCCTGATCTCGCGTTTGAGCCGTTCGATCATGTTGTTCTATTCTTCCCGCCTATCTTTTTCTTGTGGGGGCGTTGGAAAACCGCCGTTTTCGCGGGCCGGTCGCGCTGGTGGTCTGACTTGTGGTGCAACTATGGCGCGACTCGGGCCGCGATATGGTTCGGGAAGGTTTTCGCTTCGCGCAACCTCGTCGCGGGTGGAGGGTGATGGGCTGGCGGGGACGGGCGCAGCGCCCATGGTGTCGTTCCCCGTGTGTGCTCCGCGCAGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGTTTATCAAGAAGGGTAGAAGCTAATTCCCAGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [50.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA //