Array 1 230789-229946 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADDMV010000001.1 Ligilactobacillus salivarius strain UBLS-22 NODE_1_length_522440_cov_343.622609, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 230788 36 100.0 36 .................................... CTGCTTAAACGTTTACTTAGCTGGATCGTCTGGTTC 230716 36 100.0 35 .................................... TCAGTTACCTTGACAATGTCGCAACCATCTGATGT 230645 36 100.0 38 .................................... AAAGTTGATTGTAGACCTTGTGCGATAATTTCATCGCT 230571 36 100.0 38 .................................... CATAATCACCGCCTAATTCATATCTTTCTTTTTCTTAG 230497 36 100.0 38 .................................... TCTTTCATCTAGTGATAATTCCATGTAGTCTATCATAA 230423 36 100.0 38 .................................... TCAAGCGCTTCGGACGATGTTATTTTTTTGAGTTGTCT 230349 36 100.0 37 .................................... TTGCAATTCTTCCAACGAACCAGCAAAGTGCATAACG 230276 36 100.0 38 .................................... AATAGTTAATGTTTTCATTGCAACACTCCTTTATTCCT 230202 36 94.4 40 G....................A.............. TCTTCGTGTCGTGTGATTGCATTGTATTTATAACCATCAG 230126 36 97.2 36 .....................A.............. TGATTAGCACCCTCCATACTGTCTATGTTGTCATAT G [230124] 230053 36 94.4 35 .G...................A.............. TTTTTTGTTATGCAAATATTTCTTCTTTTTGTGTT 229982 36 86.1 0 .G...................A...........TCT | T [229949] ========== ====== ====== ====== ==================================== ======================================== ================== 12 36 97.7 37 AATAAGAACATATCTCCGAATGAAGGAGACGAAAAC # Left flank : CTACAGGACTGAAATTGCCAACTTTCATTGAGGAAGGAAGATAAGAATGATGCTATTAATATGTTTTGATTTACCAAGAAATACAAAAGAAAATAGAAGGGCTGCGGCAAAGTATCATAAAAAATTAATAGAATTGGGCTTTACAATGAAACAACTTAGTATGTATGAAAGAGAAGTGAGACAAAAATCTACTAGAGATAGAGTAATTAAAGTATTAAAAGACGAATTACCTAAGGCAGGATCAATTACTTTATACTTACTTCCTAATGAGGTAAATGATTCACAAATAACAATTTTGGGAAGAGAATCTATTAAAAAAACTGTTAGAAAACCTCAATTTATTGTAGTATAATATAACTACACTAATTGCTAGATAATAAGATTAAAAGTTTGTCTAAAATTTAACCAAACAATGCTTATTAATGTGACCTATTGCCCATTTAGGGTACCATTAAAAATGTTAGTTATTGTTGATATATCAATTAACTAATTAAAGAATG # Right flank : AATTTAATTAAAGTAGACAAGAGAAAGCGAAAATTAGAAAAAATAATATATAATATAGATAACTAATTAGAAAGTGGTGTAATTATGACAACATTAATATCGTGTATTGGTGATACAGATCCTATAAGAAATAGACACGATGGAGCTTTATTACATTTAGTAAGGGTATTTCGTCCCCAAAAAATATTATTAATATATTCTGAGCGTGCTTTATCAAAAGAGACTAATATTTTGTTAGCATTGAATTCTATAGATGGATATAATCCTATGATCGAAAAAAGTGATGAAGTCATTTCTGATAGTGAAGTATTTATTTTTGATAAAATGTATGAAGTACTAAATGGAATAATTTCAAAATATTCTAAAGAAGATGAAGATCTAATTTTGAATTTGTCTAGCGGTACGCCACAAATGAAGTCAGCGCTATTTACTATTAATAGATTGAAAGATATCAATGTTAAGGCTTACCAAGTCGTAACTCCTAGTCATTCTTCAAATGA # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATAAGAACATATCTCCGAATGAAGGAGACGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [83.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //