Array 1 620509-615260 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP042382.1 Pistricoccus aurantiacus strain CBA4606 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 620508 28 100.0 32 ............................ CTCGGGCGAGATCGAGCCGGTGTTCGTCTACA 620448 28 100.0 32 ............................ TCCATCCTGTGTTGCATTTGATCTGCGCCCAG 620388 28 100.0 32 ............................ TCCACCCAGTATTGCATTTGATCTGCGCCCAG 620328 28 100.0 32 ............................ TCGTCCCTGAAACCATGATCCCAGAGGCTAAT 620268 28 100.0 32 ............................ TATGCGCAAGCATCCAATCGAATAGACTTTTC 620208 28 100.0 32 ............................ AGAGTCATTGCGACCTGAGTGGGCATACCCAA 620148 28 100.0 33 ............................ AGAGAAATTATCTGGGAATTGAACATCTCTCAA 620087 28 100.0 32 ............................ GGCATGAGCATAAACGAGGAAGAGGCAGAAGC 620027 28 100.0 32 ............................ ATGTCGCCCACGCTCACTGGGTTCCCGATGCA 619967 28 100.0 32 ............................ AGGACGCTGTAATACTGCTCGCCCTCTAGGAT 619907 28 100.0 32 ............................ CCACGTAACCGTATCCGCTGCTCTGCACCTCT 619847 28 100.0 32 ............................ TCCTCGACTGGTTCCAAGTGAGGCTCTTGATA 619787 28 100.0 32 ............................ TATCCAGGTGGGAACAGCCACCACAGCCCCCT 619727 28 100.0 32 ............................ AAGGAAGCCGCGTCTATCGGGCGACGTGCAAG 619667 28 100.0 32 ............................ ACGCCCGCCGCCGTATTGCCCTGGCTGTCGTG 619607 28 100.0 32 ............................ ACCTATCAGAACGCCCACCGCCCCCGCGACTT 619547 28 100.0 32 ............................ GGAAGGAGCGGTGGGACGTTTGCAGTCGAGCT 619487 28 100.0 32 ............................ TAACAGGACAAGCGCCGCGGCCCCTACAGTTC 619427 28 100.0 32 ............................ AAAAGGATCCCGTGGGTGGCAGGGGGGGGAAG 619367 28 100.0 32 ............................ ATACAGCTCAGGTACGTCAAAGCAGCCTCCTC 619307 28 100.0 32 ............................ TTCAGCCAGGCCAGTGCGCCAGCAATGGCGAA 619247 28 100.0 32 ............................ CGTAAATAAAAGGCACGCGCGCGCGATTATAT 619187 28 100.0 32 ............................ CTTCCATCGTTGCCTTTAGATATCCAGTATCG 619127 28 100.0 32 ............................ GGAAAGGCGCCTCAGCGAAGCGCCAGACCGCT 619067 28 100.0 32 ............................ CTCAGTGTGTCCTGTTGTTTTGGGTCGGCGTC 619007 28 100.0 32 ............................ TGGCCACCGGCAAGCCGGTGGAAGACGAAGGT 618947 28 100.0 32 ............................ GCTCTCTGATCAGTTTGTTTGCATAATCAATC 618887 28 100.0 32 ............................ TTAACGTAGATACGATCGACCACCGGCACAAT 618827 28 100.0 32 ............................ AATGCGAGTAGGCCTTGTCGTGCCACACAGCC 618767 28 100.0 32 ............................ GTATCAGGACGCATCGGGAACAGTCCCAGCAA 618707 28 100.0 32 ............................ AAAAGCCGTGCAGCTTGTGCTGTCATGCGTTG 618647 28 100.0 32 ............................ TGTAGCGCAGCGGCAAAACCCGTAGTTTGAGG 618587 28 100.0 32 ............................ CAATATGAAAAGGGTGCCATATCGCTGAGCCA 618527 28 100.0 32 ............................ AAAAGCCGTGCAGCTTGTGCTGTCATGCGTTG 618467 28 100.0 32 ............................ TGTAGCGCAGCGGCAAAACCCGTAGTTTGAGG 618407 28 100.0 32 ............................ CGCAGATCCCGGCGCAGGTTGGCTATCTGGTC 618347 28 100.0 32 ............................ ATGCACGGATCGCCGACCAACGCCAGGACTTC 618287 28 100.0 32 ............................ GGGCAGAACATGGAGCCGTTACCGCCTGAGCC 618227 28 100.0 32 ............................ CGATATGGCCTGCGACAATAAACCGTGCATAC 618167 28 100.0 32 ............................ TGGAAGCATTGGTCGAAGAAACACTGAGGCTT 618107 28 100.0 32 ............................ CGTCACCCATTGCCATAGCGCGTAGGCCAGGA 618047 28 100.0 32 ............................ AGTCGTCTTGACATCAACATCGCGCTTATCAC 617987 28 100.0 32 ............................ CCGGTAATCCGGGCTTTTTTTCACTTCCTGGC 617927 28 100.0 32 ............................ TGGTGGGCGTATACGGTGCGGCTCATATCAGC 617867 28 100.0 32 ............................ AGGCAAAGAAAAATTCAAACGCACCACGACAA 617807 28 100.0 32 ............................ GGCAGCACATGCTATAAGCGCAGCAAACCCAA 617747 28 100.0 32 ............................ ATGGCTAATGCTTATTTGTCTGCGCTGCATGT 617687 28 100.0 32 ............................ ATCTCGATCTTGCGGCGCTCAAGAAAGATGTC 617627 28 100.0 32 ............................ CGCTGCGGTATTGCCCTGGCTGTCGTGACCGA 617567 28 100.0 32 ............................ GCTCTCTGATCAGTTTGTTTGCATAATCAATC 617507 28 100.0 32 ............................ TTAACGTAGATACGATCGACCACCGGCACAAT 617447 28 100.0 32 ............................ AATGCGAGTAGGCCTTGTCGTGCCACACAGCC 617387 28 100.0 32 ............................ GTATCAGGACGCATCGGGAACAGTCCCAGCAA 617327 28 100.0 32 ............................ AACAAGACCTGGCCTTGGGCCACGATTAGCTC 617267 28 100.0 32 ............................ ACCGGCAACAGGCAGGCGAACATCTCGATCAC 617207 28 100.0 32 ............................ GCCAGTACCCGGACAAGGCCAAGGAAATCGTC 617147 28 100.0 32 ............................ GCGCCGATGCCGCTGGCCCAGCTGGGATCCGC 617087 28 100.0 32 ............................ GAGCGGGCCGTGGATGCCAAGCAGTACAAGGA 617027 28 100.0 32 ............................ CAGGCCACGAGTCAGCACGGAGACAGAATCGA 616967 28 100.0 32 ............................ AGCGGGCGGCCTGGGCGCTGTTGCGGGTGATC 616907 28 100.0 32 ............................ ATCACCGCTGCAAGATCAGCGGCATCGTAGTT 616847 28 100.0 32 ............................ TCGTCGAACGTCCGGTAGGTGAAGCTGTCGGC 616787 28 100.0 32 ............................ AAGCGAGTGGCCAATAGTAACGGCCAGACCGT 616727 28 100.0 32 ............................ TATTAAAATCAATAACTTGCGCTTGTCCCGAG 616667 28 100.0 32 ............................ TCGATCATATCGTCGTCGGCGGAACCGAGACG 616607 28 100.0 32 ............................ TTCTATGCCGCCAACGTGGCCTTGACCCTGCT 616547 28 100.0 32 ............................ AGTCGCCGGCGGAGCTCGCGGCCCGGGCTGGC 616487 28 100.0 32 ............................ GCATCCTCCGTCAGCAGCCGGGCAATCTCTGC 616427 28 100.0 32 ............................ AGTCTGCTTTTGTCAGTTTCATCGGTATCTCA 616367 28 100.0 32 ............................ TTAACGAGGTCAGTTCGGTTCCGCTTCAGCAG 616307 28 100.0 32 ............................ TGCTGGCGCTATATCGACCGGCGCCGATGACC 616247 28 100.0 32 ............................ ATCAAATCTCCTCGACTTCGATGCTGGCGTCG 616187 28 100.0 32 ............................ CGGACCTGGCGTCGGATCATCGCACCAGACCC 616127 28 100.0 32 ............................ GAAGACCTGATCGCCATGATCGCCGAGCGACG 616067 28 100.0 32 ............................ GTTAAGCAAGCGCGTCGAGAGTGGGCAGCACA 616007 28 100.0 32 ............................ GCGATGCCGCGATGGCGTGCCGGTACCGGGTC 615947 28 100.0 32 ............................ AAGCTGGATATCCGTCAGCGAGCGCTTGCCCC 615887 28 100.0 32 ............................ GCATTGCGGGCATCGCCTGGGCTCTTGTCGCT 615827 28 100.0 32 ............................ ACCTCCCAGGCGCTTCACGCCGTCTTGCGGCT 615767 28 100.0 32 ............................ ACCTCGGCGATGGTGGCCAAGCGGATCAGGTT 615707 28 100.0 32 ............................ TCACCGGCGCGGGTTATCGAATCGCTGATCGG 615647 28 100.0 32 ............................ AGGTCGATCTTGAGATAGTCCGCCGCCAGTAC 615587 28 100.0 32 ............................ GACCGGCGTGGTAAGAATGTCGCGCACGGATT 615527 28 100.0 32 ............................ AGTGAGGTAACCCCATGCCCCAGTTCTATACC 615467 28 100.0 32 ............................ TAGTTCGACGGTGATTTCGCGGGATCGGTATT 615407 28 100.0 32 ............................ GCATACTGATAGATAGCGCCTACCCACTGACG 615347 28 100.0 32 ............................ ACGCGCAGCATAAATGCCTCGGCGCTACATTC 615287 28 96.4 0 ..........................C. | ========== ====== ====== ====== ============================ ================================= ================== 88 28 100.0 32 GTTCGCTGCCGCCCAGGCAGCTCAGAAA # Left flank : AAAGACTCGAGCAACTGATGGAGAGTGAATGGTTAATCGGCATGCGCGATCACGTCGTATCGAGCAATGTGCAAGCGGTACCCGAAGGTGTGAGACATGTCGTAGTGAAGCGTAGGCAGTTCAACACCGGCGGCGAAAGCCGCGCCAAGCGTTATGCCAAACGTCATGACATAAGCCTGGAGGAAGCGCGGCAGCTATATGCCGCACCGGCGTCGCGTCGCATCGAACTGCCGTTCGTACAGCTCAACAGCCGCTCGAGCCAGCAGCGCTTCTGCCTGTTTATCGACCACGGCAAGCCGCAAAGGGAACCCGTACAAGGCACGTTCAACCACTACGGCCTGAGCCGTCATGCCACGGTACCCTGGTTTTGACCCTTTTTTGCAAGAAGTAAAAGAAGATCTATAAAACAATGGGTTAGCGGTGTTGCCTTGATAAAGGTAATATCGCGCTTTTTACAGGAGGCTCTTTAAAAATCAATCAATTAGCGTTATTTTGCTCTA # Right flank : TGAAAAGGGCATTCGAGCATATCGAGCCGGCTAGGGGCCGGGTTGCTGGCGCAGTCAAAGAGCAGACCAAGGGGGCGGGCCATCACCGAGGTGCCTATACTGATGGCGCGTCCCGGCCAGGAGCAGGTCCATGAATCTCGAGCGGGTGGTATTCGGTTTTTTCGTCATTCTTACTTTGAGCCTCAATGTCGCCTTCGTCGCGGGTAGCGTCGAGGCGGCCGCCCATCACAATGTGTGGATTCTCACCTTCGCCATCATCGTCAACCTGGTCGCGATCGGTCTTAAACTGGGGGATCGCTCCCAGATCGGGGCATTGCTGCTGGCGTCCGGTCTGGTTGCCGGCCTTCTGCTGATCACGGCGCGGGTCGTCTGGATCGTCGCGGAATCCGGTGATGGGGGCGGGCCGGCGCCGGGAGAGATGACCGATATCGTTTCAATCGCAAGGGGAGCGCTGATCGCGAATATCGTCGCGACGGTGATCCTGGTCGGCGACACGCTGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCCCAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCCCAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //