Array 1 729-1821 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_ANPR01000175.1 Streptococcus agalactiae FSL S3-568 ctg7180000050786, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
       729	    36	 100.0	    30	....................................	TCACTCGATAAGGATTCTGTATCTTTATTT 	
       795	    36	 100.0	    30	....................................	GTCACTATTATCAATACTTAAGAACAATAT 	
       861	    36	 100.0	    30	....................................	CACGTTGAATCGTCTGTAAGGGACAAGTGT 	
       927	    36	 100.0	    31	....................................	ACAGGCTCAATCATATCACCTACCTTGGCAT	
       994	    36	 100.0	    30	....................................	CAACACAGCTGTAACGCTTTTGGTATTACT 	
      1060	    36	 100.0	    30	....................................	TCCTTAATCGTTACTTGATTAGCCTCAATT 	
      1126	    36	 100.0	    30	....................................	AATGAATTGTTCTACTCCATTAAACGGGAT 	
      1192	    36	 100.0	    30	....................................	CTTTTTCCCAACCAAACCTAGCAATAAGAA 	
      1258	    36	 100.0	    30	....................................	CATTTGATGCGTCAGAAGTGGCAATGCTAG 	
      1324	    36	 100.0	    30	....................................	TTCTGCAAAAGATTTATCGTTAAACTCTGC 	
      1390	    36	 100.0	    30	....................................	ATGTTTTTAAGAAATGTTCGTCTATTAAGC 	
      1456	    36	  97.2	    30	..............T.....................	ATAAAATAGCGGAACATAACAAGATGATAT 	
      1522	    36	  97.2	    30	..............T.....................	TAAAGGAGTAATGATATAGTCTGAACTCTA 	
      1588	    36	  97.2	    30	..............T.....................	CAAGGACAAAAAACTTACTTTGGAATGGAC 	
      1654	    36	  97.2	    30	..............T.....................	TTCCGTTGCCAATTGTTAACAAGTAGTTGT 	
      1720	    36	 100.0	    30	....................................	AAATGCGAATAGCTTTTCCACTATCTGATA 	
      1786	    36	 100.0	     0	....................................	|                              	
==========	======	======	======	====================================	===============================	==================
        17	    36	  99.3	    30	GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	                               	       

# Left flank :   CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTAAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG
# Right flank :  CAGAGTTAACTAATTTTCATGCTATCACAAAGTTTTAGAGCTGTGCTGTTATTATGCTAGGGCACCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTTAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAGTTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGGACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTATTTTTCGGATTCAAAGAGAATGTGTCGATAGAAGAGATACGAAAGACTATAATTCCAACCTTATGGTTAAAGGGCTAAGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTTGCAAGCTTACAAGGAAAGTAGTGGAGAACCTATCCATAATCAACTAACAGCTATGATGAATCTCACCTATTAATAT

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:58.33%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-4.70,-0.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [56.7-66.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.87,0.27   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//