Array 1 274392-276078 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP040411.1 Dolosigranulum pigrum strain KPL3256 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 274392 36 100.0 30 .................................... GAATGATCCTTTTTCACTCTTGTCTCCATT 274458 36 100.0 30 .................................... TTTATTAAATAGATTTAAGTGGGATAGGAT 274524 36 100.0 30 .................................... ATACACTTAGCTAGGAAGGAGTTGGTGCAA 274590 36 100.0 30 .................................... TGATGAATATGAAAACACACTACACAATGT 274656 36 100.0 30 .................................... CTCATTGATGTTTGAACAATCGTAGTTGTC 274722 36 100.0 30 .................................... AGCATGAATTTCACACCTGCGTCCAAAGCA 274788 36 100.0 30 .................................... TCCTGCTTCATATCTGAATAAGTTAAAATA 274854 36 100.0 30 .................................... CGGCCAGAGATTAAAGAGGATTACCTCAGA 274920 36 100.0 30 .................................... CTTTTGATGAATTTAATGACCATATGGCTA 274986 36 100.0 30 .................................... TCAAAGCTAAGTCTTTCGCCCAATCCACGA 275052 36 100.0 30 .................................... TGCATCATGTCGAAGATGAACAGATTAGGG 275118 36 100.0 30 .................................... CAACTCTTGGCGTATCTCGTCACTAACAAA 275184 36 100.0 30 .................................... TCAATGCATGGAAGAAGATGTGGGAGCTGG 275250 36 100.0 30 .................................... AATTATTTGTGGCATTGAATAGTGCAGAGA 275316 36 100.0 30 .................................... CGTAGACGGTGTTATCTCAATTAAAATCGG 275382 36 100.0 30 .................................... ACACGCAAGTACACTGATTGGGTTCTTAAT 275448 36 100.0 30 .................................... CGTATTATAATCTGCGTGGTCGTCATACCA 275514 36 100.0 30 .................................... GAGCGCATTTGAAGTTGCTCAATCCCAAGA 275580 36 100.0 30 .................................... TGAGTTATTAACCAATAGACTGGATCACAT 275646 36 100.0 30 .................................... AGGTATCTTAATGTTCCCTGAACGCGTAGA 275712 36 100.0 30 .................................... CCTTCAATGGTTTAGGATTATCATCCGTTA 275778 36 100.0 30 .................................... AAAGTGTATCGGCTGTTTTCTAAGTTAGTT 275844 36 100.0 30 .................................... AAAGTGTATCGGCTGTTTTCTAAGTTAGTT 275910 36 100.0 31 .................................... TCTTCCCGACAAACGATGCGAATAAGGCGGA 275977 36 100.0 30 .................................... TTGTGCAGAACAGAGGGCTTCCCGGAACAA 276043 36 91.7 0 ..............................T...TT | ========== ====== ====== ====== ==================================== =============================== ================== 26 36 99.7 30 GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC # Left flank : GACTAATCAAATTACTGAACTGATTAATGCAGAGGTACTGAATCATGAATTGGATTTAGAACTTGATGAAATTACAATCCAGGAAGTACTTATCGCTTTAGGAGTGAAGATAGAAGTTGATACAGATACACTATTTGAAAAGGTGTTGGAAATTTTTCAAGTCTTTAAATATTTGCGAAATAAAAAATTACTAATACTTGTAAATGTAGCTTCATATTTTACAACCGAGGAGCTTAATGAAATGGCACAGTTTGTCTCATTGTTACAGATGAATGTGCTGATGATCGAACCAAAACCGACTGATTCTGAGATAACACAATATATCCTGGATTCGGATTTCTTTTTAACCATCAAACATGGTAAAATGAAGTAGAAGATAAACTAGAAAAATAGGAGTCGTTCAAAGCTGAAGTTTTGCATGGACGAATGGCGTGATTACGAAATTTTGTGCAAATTTCTTATGAAAATCATGATTTTTTAGAAAAGAAATACTGTGCGAG # Right flank : TGATTGGTCAGATAACTTATGAGATTTAGAGTTATAGTGTATTGATTTTTGATGTAATAATTATTAATGAAACATATAATCCTGTTTAATCTTCTAGTCAAACTAGCTAATTAAATAGGATTTTTGTTTATTCAGGAGATAAGGTATTTGTGAAGTGTTTCCCGTGATTATTAGTCGAAATTGTGGTGGGAATATGCGATAATGTAGAGCAAGGAGTGATGGATGTGAGTAAGGAATTGTTAGTATTGATTGATTATGAAGTGGATGTATTAGAGACGTTTCGAGAGATGGCTAGTGAATATCAGTTGGTGAGTGAGTTTGAGGAAGCTGATTTTTCGAAGGTTGAGATTGTACTGGGTTGGGATGAGCGGTTAGTTGATGTGCTTGAGTCTGGTCAGCATCAGTTGAAATGGATTCAGTTATCGACAGCTGGAGTGGATAAGTTGCCACTTGATTTACTAGCGCAAGAAGGGGTGCGGTTGACTTCAGCAAGCGGGATG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTTGAATGACTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.00,-2.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //