Array 1 103648-105443 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATXB01000002.1 Methylohalobius crimeensis 10Ki H035DRAFT_scaffold00002.2_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 103648 28 100.0 33 ............................ TCCTCGCCATCGATCAGCCCGGATGCGACGGCG 103709 28 100.0 33 ............................ CGATCCCCGCAAGGCGCGCACATGCCGCCCACC 103770 28 100.0 33 ............................ TCAAAGGGCAGCTCAAATTTCCCGCGACTCAAA 103831 28 100.0 33 ............................ CTGGACGACGTGATGCGCCGCGCCGCCAAACTG 103892 28 100.0 33 ............................ TCCCGCACCGCCTGGGTCATCTCGGTGAGCGAT 103953 28 100.0 32 ............................ CGGCAGCGGGATCGTCTGCGCGCTGAAATCGG 104013 28 100.0 33 ............................ TTTTAAGCGCCAGTTCGAGATTTTTTTGCGTCA 104074 28 100.0 33 ............................ CTGCTCGACCAATACATGGCCCGGGCCGGCCGC 104135 28 100.0 33 ............................ CTGCACGGTCAGCGAGCCGGCGCTGAAACTCGG 104196 28 100.0 33 ............................ CTGACCACGCCGGAGGCGGACGTATCCTTGACC 104257 28 100.0 33 ............................ AACCGGAGTAAATGTTATGTCATATGGGAAAGG 104318 28 100.0 33 ............................ CGAGGCGGAGAGACTGGCCGTGGCCGATAGATC 104379 28 100.0 33 ............................ TCAGGTATCCCGCGACACAATCAAAGACTCTAG 104440 28 100.0 33 ............................ CTACTTGGGCTATTTTTTTTGATCTCGTGCAGT 104501 28 100.0 33 ............................ CCCCGGACGATCTATTGGACGCCACCCGCTATG 104562 28 100.0 33 ............................ TTCGTCCCTCGCTCGAGTGTTGAAACAACAACC 104623 28 100.0 33 ............................ TCAATTCCGAAGTGTTTCGATGTCGCTAGTTCA 104684 28 100.0 33 ............................ ATACCTCCAGCAATCCTGATTTAGTTACCTCGC 104745 28 100.0 33 ............................ TGATCATGGTTTTCTCCTAAATATTTGACTCTC 104806 28 100.0 33 ............................ CACTTATTATCGACAGGTTAATGGGCGGACAAT 104867 28 100.0 33 ............................ CATACCCGTTATGATTGAGCGCGGATGGGATGC 104928 28 96.4 33 .........A.................. TGACTACGGCGTCGATTACGATGACGGATTGCC 104989 28 100.0 33 ............................ CTGGAGCTTAATGTGGTCCCTGCCTGATTGTCT 105050 28 100.0 33 ............................ CCGGGGGCAGCGGCGGGGATCGTCCACGCCGGC 105111 28 100.0 33 ............................ GGTCCAGGCGACGTACAGGGACTCACCCAATGG 105172 28 100.0 33 ............................ TCCGTCGGCGCGCGAAAAACGCCAGGCGGCGGC 105233 28 100.0 33 ............................ CCGGGCCGATTTAATTTTGTGGGGATAGCCGAT 105294 28 96.4 33 ...........C................ CATGATAGCCAGTCCGGCTATCGCGCGGGCCGC 105355 28 100.0 33 ............................ TTCGGCGCTGTTGGCTTCGATATCGGCTTTAAG 105416 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 30 28 99.8 33 GGTTACCCCGCACACGCGGGGATCGACC # Left flank : TATGGCCTTCTCGGTCGCCAAGCGAGCGATGAACGATCCGGAAATTTCTCTCGAAAGGGAAATACGACGCGAAGCGGCTACGTGGTTCCGAAAACATAAGTTGATTCCCAATATGATCGACCGGATCAAGGAGTTGCTCCATGAGCATGACAGTGGTGGTAACTCGTAACGTTTCAGACCGGATTCGAGGTTTTTTGGCTTCTTCTATGTTAGAGCTCGCCCCTGGCGTTTACAGTGCTCCCCGCCAATCTCCCGCCGTTCGGCAGCGTATCTGGAAAGTTCTTGAGGAGTGGTTTTCGATCGAGACCGAGGCATCGATCATCATGCTCTGGCAAGACCCGCAAACTCCCGGAGGCCAAGCTGTCAAAACCTTGGGTTTACCTCCTATCGATTTGATTGAAATAGATGGCATTGTCTTAAGTCGAAAAAATAAAACACCCTCTATCAAATAGAGGGAATGATTGAATTTTTTGTTCTTTAACAAAATGTTATGGTTAAGA # Right flank : CATCAGGCGAAGCGAGACAGCGAAATTCGCCGCATTCTGAGACAGCAAGGCGGGTATAGCGGATGGCGGGGCCTCCCACCGGATGACCCGAAACCCCGCATAATGCTCCGGTCAGGCGACCGTGCTACGGCCGGGAGAATTTCACCGTGTCACATCCGCGCCCTATATTGTAGACCTGATCGAACAGATAAAGTGCTCCGATGATCCAAATCGAAGTCGACGACCGCCCCGTCCTGGACGCCCTGGGGCATCTCCTGGATGCCGTGAACAACCCAACCCCTGAGACGACGGTGTCAGTTCTCACATTCCAACGTTATGAGGCAATAGCGTCAGATCTTGCAATGCAACATCTATCTTGACAGGAGGAATGTGCGATTCGGTCTCCCGTCCCTGCGCAGGGAACCGTGTTTTGACTGTCTCAAAAGCCGCCCGTCGGAAACTGGCGCTTCTGAATCGGATTGCTTCCGTGGAAGAATTGCGTATTCCACCCGGCAACCGGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTACCCCGCACACGCGGGGATCGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 1 163440-162703 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATXB01000001.1 Methylohalobius crimeensis 10Ki H035DRAFT_scaffold00001.1_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 163439 36 100.0 34 .................................... GGCGGCGCGGTGCCGGTTTCTTGGGGGGGGGCTA 163369 36 100.0 34 .................................... TCTTTAGCCAGGTCGCAAGTTTTGGGAATGAATT 163299 36 100.0 34 .................................... TCAATTCCTGATAACAGGATGTCATCCCATTTCC 163229 36 100.0 33 .................................... GTCTAGCAAACGCTAGACAAAATACAATGGTTT 163160 36 100.0 35 .................................... GTGGTTACTTTCGCTTTCATTGTCTATCTCCTCTT 163089 36 100.0 35 .................................... TACCGGATCTTGACCGATCCGTATCGTTACCGTTA 163018 36 100.0 33 .................................... CATAGTCCGAGACCGACTTTGTCAATGACCAAG 162949 36 100.0 35 .................................... GGGGGAATCCCCTCTATCCTTTTTAGCGCTTGGAA 162878 36 100.0 35 .................................... GAGCCGGTAGATTTTTATTGCTTGCGACCCGTTGG 162807 36 100.0 33 .................................... TGAAAAACTTTCGCTGTTTCTTCGATTTGAATG 162738 36 97.2 0 ...................................G | ========== ====== ====== ====== ==================================== =================================== ================== 11 36 99.7 34 CTCGAGAAATTGACCTGATGAAAAAGGGATTAAGAC # Left flank : GGCGACCGTACCCGCAACTGGATCGGCCGTCTGTGGCGCTGGCTCGAACAAAGCGAGGCCTACACCTGATGACATTACGCACCAAACGCCCGCACTTGGCCTGTTACGACATCAGCGATCCGAAACGATTGAGCCGCGTCCATCGGTATCTCAAAAAAATCGGCATTCCGCTGCAGTATTCGGTGTTTCTGTTGCATATCGAGCCGATAAAACTGGGCCGGATCATCGCCGGACTCGATCGGTTGATCGATCCACGCGAGGACGACGTCCGCATCTATCCACTCCCGCAACGTCCCGACTGGCAGTGGTGGGGCAAACCGAACTGGATGGACGGCATCGTGTTGAGCGGCGTGACATTGCCAGAAGGCTTGACCGGTGCTAGATTTAAGGACGAGGAAAGCCATTGAGGCCCGAAATGAGCGTCAACTTTTTGGCGTCAAAAAATTTCTTCAAGGGTTCTTGTAAGGTGTTGATCTTTAAAAAGAAAATTAGGGGGTGCT # Right flank : ACTCCATAATCCAAAAAGAACGCCTCAAAAACTGGTTGGAGCCCGTATCCGTAAAGTCGATAATTGTCGTGTCCCGGATGATTGACGACACGTTTATGAAACAAGTGTGGGTGTGACCTTTGCCAATTTTTCAGGGCTTGCACTGGATGAATATGCCCCAAGGCTTTCTGAGGCACTTGATGATTGTACAACCAGACGTATCGTCGAAGGGTGGTTTCCAGTTCCTCTCCGGAGCGGAAATGATACGTACGCAGGATATCGGCAATACGCCCGTTGAATCGCTCCACCATGCCGTTGGTTTGAGGCCTTTTGGGGCGGATGAGTCGATGCTCGATGCCCAGTTCCGTGCACAGTTGATCGAAGACGTGCTGTCCGGTCGGGGTCCGTTCACCCCGGGTGACAAAGCGATCGGTGAATTCTTTTCCGTTATCGGTAAGAATCTTTTCGATCTTAAACGGCGCGGTCTTGGCCAGCGCCGCCAGAAAATGCCGCGCATGGCG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCGAGAAATTGACCTGATGAAAAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 2 194502-193269 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATXB01000001.1 Methylohalobius crimeensis 10Ki H035DRAFT_scaffold00001.1_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 194501 36 100.0 35 .................................... TTGGCGCACGTCCGCCGACGATAACCAACGCCCCT 194430 36 100.0 34 .................................... TTGCTTCATCTCTCTCTCCTCTTGGTTTATGCCG 194360 36 100.0 35 .................................... ATTGGAGCCGAAAGCCGTCATCGATATGTGCAACA 194289 36 100.0 33 .................................... AGAGTTGAATGGACTGTTTCCGCAGAGATGTTT 194220 36 100.0 35 .................................... TCGTAATCTAAAAACGCCCCAAAGGCGTCTTCTTT 194149 36 100.0 34 .................................... AAAGATCTGCTAGCGGCCCAATGGCCGCTGTCTC 194079 36 100.0 35 .................................... CTTGGTTTGGAGATTTATCTAGGCGCACGAGATCC 194008 36 100.0 35 .................................... CTTGTTCAGGTCGCTCACGGTTGATTCTTTCTCCT 193937 36 100.0 34 .................................... CTAAACGTGCCGACCGCTTTCTTAAGCTCGCTGC 193867 36 100.0 34 .................................... GTCCAATCCGGACGCATGGAGGTGCTTTACCAGC 193797 36 100.0 34 .................................... GACGACGCTATCCCAATTGTTAAAGATCTGCTAG 193727 36 100.0 34 .................................... TATTTCTGCACGCCACTCACTGTGGCCAAGTTTC 193657 36 100.0 35 .................................... CCCATGTAACAGCGCATACTTAACCATCATTGTCA 193586 36 100.0 35 .................................... GCATAGGTCAGATTGGCACCGGACAGGTCGGCATG 193515 36 100.0 34 .................................... TTCTCCTACTCTGGTAATTGACAATAACAGTCAG 193445 36 100.0 34 .................................... ACGTCCGCCGACGATAACCAACGCCCCTTTCTGG 193375 36 100.0 35 .................................... GTTCGCGTAGGTATTTCTTCCGTGCTTTATTGGCT 193304 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =================================== ================== 18 36 100.0 34 CTCGAGAAATTGACCTGATGAAAAAGGGATTAAGAC # Left flank : CGAAAACTTCAGCTTCCGCGGCCTGCTCGCCGCCCTGCTTCGGCGCCTGTCACTCCTCTGTTATTTTCACGGCGATACGCCCTTGGAAATCGATTTTCGTACATTAATCGACCAAGCAAAATCCGTCACCCCGCTTCGCACCGAACTCCGCTGGTTCGATTGGAAACGCTACTCCAACCGCCAAAAAACCGAAATGCACATGGGGGGACTGCTCGGACAAGTGATTCTGGAGGGACAAGCCCTGGCTCCATTCTGGCCCTGGCTAAGCGCCGGCCAATGGTTACACGTGGGCAAGGGTACGGTGATGGGGTTGGGAAAATACCAAGTGGAACCGCTGTCCGAGCACAAATACTCCCGAAACCCGCTTGTAGAAACAGACATCGGATGCTAGATTTTAAGCCGATGGAGGCAATTGATGAGCGTCAACTTTTTGGCGTCAAAAAATTTCTTCAAGGGTCCTTGTAAGGCGTTGATCTTTAAAAAGAAAATTAGGGGGTGCT # Right flank : CAATTACCGGCTCAGCCGATCTAACGTATAACCTATTCCGACAACCCAAAATAACCGCCACATATCCCCTTCCAGCAGGGTAGCTCCCGTGGGACCACATCCAACCCTGGGCAACGATCCGCGTCAGCCAATCAGCAAGATTACTCCCGTTCTGCAAGCTTGCCGGATTGGAAAAATCGACTGAATGCATCTAACCTTAGGGCAGAGCGTCCCAATGGAAGTGGCATGAAGGAATTGCAGAATAATAAGCCAACAATCAATTTTGACCCGGAACAACCGTACACCTACCCACGCCGAATCCTGCTAGCGGTCACCGGCTTGTCGCCCCAAGTAGTGACCGAAACCCTGTACGCGCTCGCTGTGCTAGGCGAACCGGCTTTCATTCCCACCGAGATCATCCTGATCACCACCCGCACCGGCGCCGAGCATGCACGGCTTCATCTCCTATCCGATGAGCCGGGTTGGTTTCATCGCCTATGCCGCGAATACGACCTGCCGCA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCGAGAAATTGACCTGATGAAAAAGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.00,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 3 979771-977353 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATXB01000001.1 Methylohalobius crimeensis 10Ki H035DRAFT_scaffold00001.1_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 979770 32 100.0 33 ................................ ATACCGTCGCGATCGTTTCTCGCGGCAGCACTG 979705 32 100.0 36 ................................ GGCTTAATGGGAGTATATGCATGAAGCTAAATCCCG 979637 32 100.0 34 ................................ AATTATTTCTTTGGCGTGGTCATCACCATGGCGG 979571 32 100.0 34 ................................ TTTTACTGGGAGGCTTATAAATAGCACTACGTTA 979505 32 100.0 34 ................................ TCCGTCCACGTCATCCAGGAATCGGTCGTAATCC 979439 32 100.0 34 ................................ ACCTTGCTCCAGTCACCCGTTAGGAGTTCATAAG 979373 32 100.0 34 ................................ CTACTACCTGATTAAAGCCGTCGTCGTTACGAAC 979307 32 100.0 35 ................................ ACTACATGATCGAGCCGGCCGAATGCCTCACATCG 979240 32 100.0 35 ................................ AGCTCTTAGTGCTCCCAGCGTCAGCCCGCTGCTCA 979173 32 100.0 34 ................................ GGAGAGTCTGTTCCGGTTTACCGAGCCGAAAACA 979107 32 100.0 34 ................................ ACCGCCTTGTTTTTCGGCGAGGTGACGATTATTT 979041 32 100.0 35 ................................ CTCTTACGTTACGGCTGGAAATCACCGAGCGATCG 978974 32 100.0 35 ................................ ACAGATAAATACCATCTTTGCTGACCCCTACGCCC 978907 32 100.0 35 ................................ CCTTTACAAAAGACAACCTTTCCGATTTTTAGATA 978840 32 100.0 36 ................................ CGCCGTGAAACAGAATGTCGGGATCGAGTCCTGGGG 978772 32 100.0 34 ................................ TTGGCGGACGCCGCGGCGCGCTCGGCCGACTCCT 978706 32 100.0 34 ................................ TTTCTTGGTCATGGATTAGCTCCTAGTCGTTGGG 978640 32 100.0 33 ................................ TCGGATCGCGCGCTGGAGGTCCTCCAGCGTTGA 978575 32 100.0 35 ................................ GCCCCGACCCAAGCCCCCGCCGGTCCGCTATCGGA 978508 32 100.0 35 ................................ CGAACGCTGTCACATCGAGCGAATAACTCGTTCCG 978441 32 100.0 34 ................................ CGGCAGAGGAAATCGAACAGCAGCTTGCCACCAC 978375 32 100.0 34 ................................ AGGCATCCTTGCCCACGAAGGCGGCCTTTCCCAA 978309 32 100.0 35 ................................ TGGTACATTGGTGCGGTCGCGGGCGCGCTAATTCC 978242 32 100.0 35 ................................ GATGTGCTGGTGGTCGGCACAATCCTGCATTACGA 978175 32 100.0 35 ................................ TCGGCTGAGGTCGCCAATCGCATCAGCAGCATCTG 978108 32 100.0 35 ................................ GAACTCCATCCCGGCGGCTTCCTCAAGCAACGCCT 978041 32 100.0 34 ................................ GTTCAGGATCTGTCGCACTTGGACGTGAGCCGGA 977975 32 100.0 32 ................................ TTCATAGTCATCCAGCGTATTCGAATTGCCAC 977911 32 100.0 34 ................................ ACCGAGCCGGCGAGCCGTAGCGGCGAGGCAGACG 977845 32 100.0 33 ................................ CGCCTGGAGTTGTCTACCTCCTCCCCTGTCCAC 977780 32 100.0 33 ................................ TCAAGCGGGAGCGGCAGCGGGCATTGTGACCGG 977715 32 100.0 35 ................................ CGCCAATACTGGACGGAGAAATGCAACCTATTGAG 977648 32 100.0 34 ................................ GAGCTATTGGTGGCTGAGCATGGCCTTGAAACCG 977582 32 100.0 34 ................................ TTGCACGCGCGCCAAGGTCTCCTCAATCTCGCCT 977516 32 100.0 34 ................................ GTCAATCACTTGGATAGCTGCGTCCGGGTGATAT 977450 32 100.0 35 ................................ GCTGCATTTCAGCAGAACGTGCCATCCAGATCGAG 977383 31 78.1 0 ..........-..T.......G....G..GGG | ========== ====== ====== ====== ================================ ==================================== ================== 37 32 99.4 34 GTCGCGCCCCACGCGGGCGCGTGGATTGAAAC # Left flank : TATTATCCACCTTATCTGGTGAAATAAGCCATGTTGGTACTGGTCACTTACGACGTCAACGTTACCAGTGAAACCGGTCAAAAACGCCTACGTCAGATTGCGAAGGTCTGTCTGGATTACGGGATGCGTGTACAGAATTCTGTGTTCGAATGTGAGGTGACGCCTGCGGAGTTTACCGTTCTGAAAACCAAGCTCATGGAAATATTCGATCCCGAACTTGACAGTTTGAGGTTCTATTTTCTCGGCAAGAAAGGACGCAACAAAGTCGAGCACGTTGGCGCCAAAGTTGTTCAGGATCCGATTGGCGATGCATTGATTTTATAACGCGCTAACCATCGGTTCTCATGTCCTTCCAGGAAGGTTAGCGACACTGTAATCAGTTGAATATAAAAGGTTTTAGAAATCAATATTCGTCCATTCGCTCTTTAACAACTTGGAAACCTGAGTTTAGCGCTCCAAAGCCTTTTTTATTTTCTTATTCAGAAGGTTAGAATTGAACG # Right flank : CTAATTACACTTACCCTTCCCGCCGATACCACTCCATCAATTCCCTCGCCGCCTGCCAACCGGCATAGACGATCACCGGCGCAACCAATGCTTCCGGCCAGCCTACCCGGCCCGGTGTATGGTCCACCAGAACCATCAGAAAGCAGCTGGCCACCAAGAGCATCAAGGACGTAAGCACGCGTCCGAACATCAGCAATCCCCCGTGGCTCTTTCCAAAGACTTTGATTTGGACTCGAAACTTACTCCAGGATTCCTGATCCACCCGCCTTGGATCGCTCCGGCATTACTCGAATGCAAGACCAACCATGTAGATATAGGCTGCAATTCAAAATATTTCTCCGTTTCTAGATCCCAGCCATACCTTGTTCCCGCAACAGCGGCATCAACGCCAGCAGCAACTGCCGCTCCCGCTCCATAATCCGCTGCCGCATCCCATAGGGATAGCGGTCCACACACGCCGCGGCAATATCCAGACAACACATAAATACCGCTTGCCCCTT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCACGCGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCACGCGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-10.90,-10.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //