Array 1 42289-38895 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHKPZ010000032.1 Lacinutrix sp. C3R15 C3R15_C3R15_contig_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 42288 36 100.0 30 .................................... ATAATTCATAGATTATGGCAATAGGAACAG 42222 36 100.0 30 .................................... TTATAGAAACGCCACCAATTTCACCGTTTA 42156 36 100.0 30 .................................... TATACCGTTATGTGTTCTGTTACCTCTTGA 42090 36 100.0 30 .................................... TTTTTAAGATCGTAACGAAATTGCACCCCT 42024 36 100.0 30 .................................... GCCAATGCTAATTAATAAGGTATTTAAAGC 41958 36 100.0 30 .................................... ATACACAAATACGTTAGAGGTCATTGTGCA 41892 36 100.0 30 .................................... ATTATAAAAGTAGTTATAGACCAAGTAGGA 41826 36 100.0 30 .................................... AATATAAGCCTACAGAGTTTGTTGCACAAG 41760 36 100.0 30 .................................... TTGACTAGCTAAAGGCAATTTAACGTATAA 41694 36 100.0 30 .................................... TAGGTTATGTGTGAGCTTGGTTGTTAGTTA 41628 36 100.0 30 .................................... TAGTAATTAGTGAAAACAGTACATAGGTTA 41562 36 100.0 29 .................................... GATAGCCAAGTTATAATTGGTGATAATGT 41497 36 100.0 30 .................................... TTATAACTTTATATTTTTTACCGTTTGTAA 41431 36 100.0 30 .................................... AGATTTTCGAGTTATACGATACTCTAACCA 41365 36 100.0 29 .................................... TTTACGTCTAAGTGCTTCGCCTATATTCA 41300 35 97.2 30 ...........................-........ TAAGCTATCTCACTAGAAGCACTCCAACTA 41235 36 100.0 30 .................................... TTCTGCTAAACCAGTTTGAAGAAGTTGTAA 41169 36 100.0 30 .................................... TTCCTGGTCTTTTATTAATTGCTCTGGTGT 41103 36 100.0 30 .................................... AATATGGATGAATTAAAGAAGGTGTGTCTG 41037 36 100.0 30 .................................... TGTCGTAGCTAAAGGTAGTTTAACATGTAA 40971 36 100.0 30 .................................... TGCATAACCGTTATCTAAAACCTCTTCTAA 40905 36 100.0 30 .................................... AAACACTATGCCAACCAAGGCCGCAATGAG 40839 36 100.0 29 .................................... TGAATTTTACGCATTGATATTCTTCTTCT 40774 36 100.0 30 .................................... TAGTGGTAATGGTTTAAAGGCACTTGTTAA 40708 36 100.0 29 .................................... AGACCTGTTTTAGAGTTGGCAAAAGAAAT 40643 36 100.0 30 .................................... GTGCTCATTTAAAAATATTTTGTTTGGTAA 40577 36 100.0 30 .................................... TATTATTTGTGCTTAACCATGTATAACCAT 40511 36 100.0 30 .................................... ATATTTTAAACCTAAACCTCTAAACGCTTG 40445 36 100.0 30 .................................... ATACCCAAAATCAACCGCACCTAAACCTAT 40379 36 100.0 30 .................................... TTTGGTGGATGGATTTTAACCCATGCTTTA 40313 36 100.0 30 .................................... CATATTAGCACTAGTGCTAGCAACTACATT 40247 36 100.0 30 .................................... TTCAATCTTAGAAGACAATTCTCCTGCTCT 40181 36 100.0 30 .................................... TATAAGATATTAGAGCAAACAAGGAGATTA 40115 36 100.0 29 .................................... ATTTACAATGGGACAAATTGGTGACACAA 40050 36 100.0 30 .................................... CTTCATCGATTGCTACTGTTCCATCAGTAA 39984 36 100.0 30 .................................... TTACTGAATTAACGTATAAATTTTGTATAG 39918 36 100.0 30 .................................... TCAAGCTGTAGTTATGAGAACTAGAGCTAT 39852 36 100.0 30 .................................... TTGTGTGCTAGTTGTTTTTGTTACTTGTAA 39786 36 100.0 30 .................................... TTCTTTTTTTGGTGCCCAAGCTTCAAAAGA 39720 36 100.0 30 .................................... TGTTACCTCTTCATCTAAAGTCTTTGCGCG 39654 36 100.0 30 .................................... TATTTCTATCTATAAGAAGTAAGGATAAGA 39588 36 100.0 29 .................................... CTTAACAGGCTTAAAAAACCACAAAGACA 39523 36 100.0 30 .................................... AAATGTTTTTCTATTTTGCATTGAACAAAA 39457 36 100.0 30 .................................... CCAGGACCTCAACCGGCAGCCACCCCCACG 39391 36 100.0 30 .................................... AGTTCCTACAGAAATAAAGCTTACAGAATG 39325 36 100.0 30 .................................... ATTATCTTTTATTTACAATACTATTTCATA 39259 36 100.0 30 .................................... CGATTTAGTCACTCAATTTGGCAGTCACTA 39193 36 100.0 30 .................................... GAAAACGGAATTTTTCAATAGTAAATACAT 39127 36 100.0 30 .................................... ATCAAATACTAATTTACAAGCGCGTGAAGC 39061 36 100.0 30 .................................... TGCTTTTGCAGGTGGTGAAGTCATAATCGC 38995 36 100.0 29 .................................... TTCTGTAAAACTTATTGATTCCTCAAATT 38930 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 52 36 99.9 30 GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Left flank : TAGAGATGCTGGACGATACTTTAAATTAAGTAACAAAAATAATTATGATTCACTAGTTCCGATGGTGCACCTTAAGTCAAATTTACCATTAAAATACAAAGTTAAAAAAGGAGACTTAGTTTTGTTTTATAAAGAAAACAAGGATGAGTTATACGAAATAGATGGCCTTTCATTAGCAAAAAGATTGTATAAAGTAATAGGTTTTGAAGGAGATGGAAGAATTCAATTTAGGTTTCATAAAACGGCGATGCAACAAAGTAGTAAGAATAAAGAAGAAATGACTATTGTTAAATACATGAAAGATAAAGGGGTGAAGAATTCACAAGTTAATTTTGAAGAACCTGTGCCTTGGTTGCGATTATCGATGGGAAATTTTAATTTTTTATTAAATAAAGAAGAGTTTAAAATAAGTTCAACTAGCAAGATAAAGTTTTTATGAAATACTCGAATTAGATTAAAAATAAGATATTAAAAAGGGTTTGAGTTCTGGGTATAGAAAA # Right flank : AGCTGGTGTGTTACCTTTTGTTATTCAGTGGTTTAGATTGATGTATCGTTTAAAAAAATGCTTCTTTTTTGCAGTGATAAGGCAAGATTGTTGCATTTTTTTGTTTTAAAATAATTCTAATTGGGTTGGTTGTGGTTCTTTAGGCATTTCTGCTCTACCCCAAAAATTCATGATGTTTCCAAATTGTTTATCGGTAATTCTTAAAATACTTACTTTGCCTAAAGGAGGTAATTGTTTTTTTATTCTTTTTTCATGGGCATCTGCACTTTCACTACTAGCACAATGTCTCATGTATACAGAATATTGCATCATAGTAAAACCATCTTTTAATAGGTTTTTTCTAAAACCAGCCGCGTTTTTTCTGTCTTTAGCAGTGTCTGTTGGTAAATCGAAAAATACAAATAACCACATAATTCTATAACCGTTTAGTTCCATAATTTAGGGTACTTTATTTTTTTTCGTTTCCCACTATAGCATTGTTGTAAAGAGCTAGCTGTTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: R [matched GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //