Array 1 3700-7826 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACLCT010000001.1 Chryseobacterium sp. C2(2020) NODE_1_length_277111_cov_123.768794, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 3700 47 76.6 30 TCCTGCTGCG.A................................... AGAACCGAAGGGAGTACCCAACCAAAAGAA 3777 47 100.0 30 ............................................... GTGAATGCTGGTTAGGAGGTGACGAAGAAA 3854 47 100.0 30 ............................................... TTACAACTATTTTTTTTCGTGCTGATATCC 3931 47 100.0 30 ............................................... GAACGCCAATGTTGATGTATGTACAGATTT 4008 47 100.0 30 ............................................... ATGGAGTGCATTTTGAAAATCAGAAAACGT 4085 47 100.0 30 ............................................... TGTACTTGGATAACATTAAGCGAACAATCA 4162 47 100.0 30 ............................................... TCGCAAGAGCGTTTTTGTTTGCAGTTGCGT 4239 47 100.0 30 ............................................... ATGAGCCGTAGGATGTAGTATATCACTTTT 4316 47 100.0 30 ............................................... TTGAATAATAACGTCGAGGCAACACCTTTA 4393 47 100.0 30 ............................................... TTTGATTTTTTTTTTAGACCTTTGAGGTAC 4470 47 100.0 30 ............................................... TCAGGAAATTTTTTCAATTAACTTTTCGCC 4547 47 100.0 30 ............................................... CCTTTGCTGCAAAAGGACTTCTCAGCAACA 4624 47 100.0 30 ............................................... GAAATAGATCAGGAATTGACAGATCTTTGG 4701 47 100.0 30 ............................................... TAATCAAAATATTTTAACCACTTCAAAAAT 4778 47 100.0 30 ............................................... TTTCTCTTAAAACTTTATGAGCGACATTTC 4855 47 100.0 30 ............................................... ATATGTTTCTGCCCGGAATGATTTGAGTTT 4932 47 100.0 30 ............................................... ACAATCTAGCACAAAAGCAATATGCAACTT 5009 47 100.0 30 ............................................... TTCAGTTATTCAAATACGACAGGAAGCGCA 5086 47 100.0 30 ............................................... TCAATTCTTTATAATAACGTGGAAGAGGCT 5163 47 100.0 30 ............................................... TGTACTTGGATAACATTAAGCGAACAATCA 5240 47 100.0 30 ............................................... TCGCAAGAGCGTTTTTGTTTGCAGTTGCGT 5317 47 100.0 30 ............................................... ATGAGCCGTAGGATGTAGTATATCACTTTT 5394 47 100.0 30 ............................................... TATATTCAGAACGCTGAAGAGTTCTATTGT 5471 47 100.0 30 ............................................... ACATGGTTTTGCGATTTTGTATAGAATTCT 5548 47 100.0 30 ............................................... TGTTCGCGCTTATAAGACAATAGCATTTTT 5625 47 100.0 30 ............................................... CCATAGCATCCGAGTAGGATCTACGTGGAA 5702 47 100.0 30 ............................................... TTTTCGTAATATTCTATTATCTCAGGTGTA 5779 47 100.0 30 ............................................... AAAAAATATAATCTGCCAGAACTTTGGAAA 5856 47 100.0 30 ............................................... CCGAAGAATTTATCAACCTCACCGGGGACA 5933 47 100.0 30 ............................................... GTTATCAATTTCATCAAGCGAATATCCTTT 6010 47 100.0 30 ............................................... TTTTCGTAATATTCTATTATCTCTGGCGTA 6087 47 100.0 30 ............................................... GATTGTAGGATTATCAATACCTTTGTCTTT 6164 47 100.0 30 ............................................... TATAAAGATTAGATAAGGAATAGTAAGAAT 6241 47 100.0 30 ............................................... CATAGAGCTGATGGCTCTGTAGGTAATGCA 6318 47 100.0 30 ............................................... GTACATATACAAATTCATTAGGACAAGATA 6395 47 100.0 30 ............................................... AATATATGAGAGTGTTTTACATTCAGAATC 6472 47 100.0 30 ............................................... TAATCTAAGAACTGTAATACAACTCGCAGA 6549 47 100.0 30 ............................................... CCATAGAATTTATCGCTTTCACCGGGAACG 6626 47 100.0 30 ............................................... ATCTTCCACTGTCTTTTGCGTATGCGCTTA 6703 47 100.0 30 ............................................... GCCGCGGGTATAAACCCTCATCTTGCATAT 6780 47 100.0 30 ............................................... TTAATAAGATGAAACTCATTAAGAGTGTTA 6857 47 100.0 29 ............................................... TTATTCGCTTTTATGAGCAAAACCCTAAT 6933 47 100.0 30 ............................................... CTTTGTCTTGCAAGGTTGTTCTACCTGGTG 7010 47 100.0 30 ............................................... ACATAATTGTTAATTTTAATTGATTGATTG 7087 47 100.0 30 ............................................... GTAGTTTATTTTGAGTGTCACTTTGAATAA 7164 47 100.0 30 ............................................... AGAAGTAATTTATCTTCAAATACTGCTGTT 7241 47 100.0 30 ............................................... TTGTTCATAGTTAAAACTTATATTTATTGT 7318 47 100.0 30 ............................................... GTTAAAAACGACTTTCCTATTCCTTTGCTA 7395 47 100.0 30 ............................................... AGCATCACCGTAATGCACATATCCGTTAGC 7472 47 100.0 30 ............................................... TACGGCTTTACGTAAACTGGTATATCTTTT 7549 47 100.0 30 ............................................... GATTGACATTTTAATTTATACATTAATAGA 7626 47 100.0 30 ............................................... GGTCTTTATTCCAGTGAACTTTCATTGTTT 7703 47 100.0 30 ............................................... GTCTAAGAACTGCATTACTACTCGCAAGAC 7780 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 54 47 99.6 30 GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATGAAGGACAAC # Left flank : CCATAGCTTAATCAAAAGCTTTTCGTCGAATCCGCCTATGTTTTTCCTGCTGCGGATTTCAAAAATTATTATCCTTGGGACAGTAAAAGTTGAATGTGAATTGCTTTGACTCAGCCTAGCTTAATCAAAAGCTTTTCGTCGAATCCGCCTACGCCTTTCCTGCAACGGATTTCAAAACCATCATCTTTGGGACAGCAAAAGTTGAATGTGAATTGCTTTGACTCAGCCATAGCTTAATCAAACGCTTTTCGTCGAATCCGCCCACGCTTTTCCTGCAGCGGATTTCAAAAATTATTATCTTTTGAGACAGCAAAAGTTGAATGTGAATTGCTTTGACTCAGCCTTAGCTTAATCAAATGCTTTTCGTCGAATCCGCCTATGCCTTTTCTGCAGCGGATTTCAAAAATTATTATCTTTTGAGACAGCAAAAGTTGAATGTGAATTGCTTTGACTCAGCCATAGCTTAATCAAATGTTCTTCGTTGAATCCGCCTACGCTCT # Right flank : CCTCAAAAAATAATCTACTGGTTTTCAGTAGATTATTTTTGTTTTCAGGATTTAAAATTCAGAACAATTCGAGTTGTTGGAAGGTTGGTGGAGGTTCTTCTTTATTTCTGGCAAAAAAGATTTCGATGTCTCCAAATTGTTTATCGGTAATGCACATAATAGCAACCTTTCCGGCTTTAGGAAGCATAAATTTTACTCTTTTGATATGAACTTCCGCGTTTTCGCGGCTCGGACAGTGTCGTACATACATCGAAAACTGAAATAAGGTAAATCCGTCATCAATCAGTGCTTTCCGAAAACGGTTCGCATCTTTCATGTTTGCTTTCGTTTCGGTTGGGAGGTCATATAATACTAAAACCCACATAATTCGGTATGCATTAAACCTTTCGGCGTTCATTTTTGGTGACTATTGTTTGTTTATCGTAACGTTCGCAGCCCGAACTGAGTGGAGCTCTTTTTGCAGATTTTTATCCTTCGACTCCGCTCAGGATAAACTCCAG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATGAAGGACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATGAAGAACAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-2.90,-2.70] Score: 0/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.68 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //