Array 1 509734-509104 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_POYA01000001.1 Neisseria cinerea strain C2014019557 C2014019557_S44_ctg_575, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    509733	    36	  94.4	    30	.........T......................T...	TCCTTAAGTTTGAGAAAACCGCCCGTAGCA	
    509667	    36	 100.0	    30	....................................	ATCCCGCCCGGCGTAACGATGCGGCAACCT	
    509601	    36	 100.0	    30	....................................	TCGACGATGGCGTCTAACGATTTGGCGAGC	
    509535	    36	 100.0	    30	....................................	ATCAGAACTTGGGTATGTTCATGCTCCGTG	
    509469	    36	 100.0	    30	....................................	CCGAACTGCATGAACCCCATTCAAGCCACC	
    509403	    36	 100.0	    30	....................................	TGAAAGCCTGTATTGCTCGTCCGTAGGCTT	
    509337	    36	 100.0	    30	....................................	CTGTTCCAAGTTATTGAAACACTGCTGACC	
    509271	    36	 100.0	    30	....................................	ATGACTTCCTTGCCGATGGCAAAGTCGTTG	
    509205	    36	 100.0	    30	....................................	GCCTGGCTTTGGCTCAAGTTTCCGAAGCTG	
    509139	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        10	    36	  99.4	    30	GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT	                              	       

# Left flank :   TCGGCGCGCTAGAACGGGGCAGCGATTGCAAACGCAGGGAAGAACGCGACATGGCAGGACTGTCCGAACGCATGGCGGCAGAGTTAGACAGGCACGGGGCTGCCGTATTTTTCCGGGAATATCCGAATGCCAACCACGGCAATGTCCCGTTTCACTCGCTGACCGACTGCGTCGAATATTTGAGGAAGGCTTGGCAGAGGTAGGGAATAACCGGCACAAAGGTATTACTTGAATTCATCACAAGGTAAGACCCAAAAAGCCGTCATCGCCGCATTGATGCGTAGGCTTGCCGGTATGTACCACATAGACAAGAAAATCGAAGATAACGGCTCATCGCGTTACAAATCAGCGTAAATCCCGATAAGAAAAAAGCATTTCTTTTGAAACGCCCGCCTTGCCGCGTGTAAAATCCTTTCAATTGTAAGGATTATGTTATCGATCAAAGGAGTATCTTTTCCATTTCGCAGCTACAATATTGCTGGACTTGACCCCCCTGTTAG
# Right flank :  ACTCCAACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTCTGAAAAAATAGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGCCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGATGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATACTTTCAATGGCAAGATTTCAGGCAGTTTCAGCTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGAGGAAACCATTTTGTCGATGGCGGCCAAGGTG

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.90,-0.40] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [66.7-55.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.68,4.5   Confidence: HIGH] 

# Array family : NA
//