Array 1 111079-110013 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAFFIA010000003.1 Escherichia coli strain EC071 NODE_3_length_261583_cov_39.197, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
    111078	    29	  96.6	    32	............................A	AATACAGGACCAATATTTTGATATATATAATC	
    111017	    29	 100.0	    32	.............................	GTGATTCTGGCAATACTGGCACTTCCGTTTTG	
    110956	    29	 100.0	    32	.............................	TCGCCTACGAACATCAGCCGGGTGCCTGTGGA	
    110895	    29	  96.6	    32	............T................	TCGCCTACGAACATCAGCCGGGTGCCTGTGGA	
    110834	    29	 100.0	    32	.............................	GATCAGGGTATTACACTCGACGGCGGCATGGA	
    110773	    29	 100.0	    32	.............................	CCACCTCAGCCTGCGCGCCCGCTGAATATTCC	
    110712	    29	  96.6	    32	...........T.................	GGACGCGTTCCATCAGGGCGGGTCCAGGGAAT	
    110651	    29	 100.0	    32	.............................	CAGGCGGCGCAGTGGCGCATGAATCCGTTCGC	
    110590	    29	 100.0	    32	.............................	TTCTTGCGGGCGTTGCAAATATTCTCCACGTA	
    110529	    29	 100.0	    32	.............................	GTAATTAAATGTGGCAATCGTACACAGAAAGC	
    110468	    29	 100.0	    32	.............................	GTAATTAAATGTGGCAATCGTACACAGAAAGC	
    110407	    29	 100.0	    32	.............................	AGCGAGAATGAGGCCGCTCAGGTGGCTAGTCA	
    110346	    29	 100.0	    32	.............................	TCGAGCGCCTCGCCTTTTAACTGATGCCGTGG	
    110285	    29	 100.0	    32	.............................	GCCCTTACCGCCGCACGGACATGCCGGACGGT	
    110224	    29	 100.0	    32	.............................	GCATGACGCCACGAGATAACAGTTACGGCGTT	
    110163	    29	  96.6	    32	............................C	GCTTCCAGTTCATCCAGCGCCGTCAGCGTTTC	
    110102	    29	  96.6	    32	............................A	GCCAATTGCCATATATGCCATCGCCAGCAGCC	
    110041	    29	  96.6	     0	............................A	|                               	
==========	======	======	======	=============================	================================	==================
        18	    29	  98.9	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   TGGATGAGCTATTAGCAACGCTGACCGATGATAAACCACGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACTCGTTTGTGCATTGAAACCTGCATTGCGCGTAACTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCATCCATCTTGCCCATCCTGAACTAATCATTATCATTCTCTACAAATTCTGTGGCGTTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTGTAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTAGA
# Right flank :  CCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCTGTACTTGTAATAAGCAACATATCCACATAACACCTCATGTTCAAAATAGTTCCCCATGCCAGATAAGTTCACAATTATCGATACAAAAAATCAAATTTAATCAAAGTGTTATTTGTATAATCCTTAAACCGTTAAGAAATTTTAATATATTATTTTTTTAATATTAATTAATGCCTGTTAATTTTTTCTTTAGAATAACAGTGTATTTTTTAAGCTTGTTATTCATTGATTAAGTAATAAATCTGGAAGTTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTTTA

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.00,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [1-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.41,5.24   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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