Array 1 27367-26609 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADAXH010000014.1 Bacillus sp. 8YEL33 14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ======================================================================================================= ================== 27366 32 96.9 34 .........T...................... TGTTTATGTTCGTTATAGTCGAACTTATGAAAAG 27300 32 93.8 34 .........T....T................. TCTATTTCAAGGTCGATTGCTTGTAATTCCGCAA 27234 32 93.8 34 .........T....T................. GAAATAGTGCCAATGAGTAAAAATATGATTGGTC 27168 32 96.9 34 .........T...................... TTGATTCCACTGAATCAAGCCAGTGCGGAGGTAA 27102 32 100.0 34 ................................ AAGAAAGAGTAGGCAAGTACACTTTAGATTTTTC 27036 32 100.0 34 ................................ ACTATGCCTTTACCCGTAATTATGGACAAAATCC 26970 32 87.5 33 ..T.........A.T.....A........... CATAATGGTAAAGTTTTAGGTTATGACCGTTTT 26905 32 87.5 33 .........A.AAG.................. ACTCCTCATTACGTATAAGCCGACAGGTAAACA 26840 31 78.1 34 ....T....T....T..-...G.A...T.... CAGTGCTGCTACACTCAGTGGGAATCTCTAGATT 26775 32 78.1 103 C..T..A......CT..C......G....... ATATCTTTAGCAACTCCTTACCAAAGCTTAAAAAGTCGCACCTCTTATTGGTGTGGCAATTGTTGAAATATAGTAATAGCTATAAGTTGCTGATATACTATCC 26640 32 81.2 0 .GGA..............C.A..........C | ========== ====== ====== ====== ================================ ======================================================================================================= ================== 11 32 90.3 41 GTCGCACCTCTTGTAGGTGCGTGGATTGAAAT # Left flank : GGATTGAAATCGAACAGCTCCTTTTATCTATTATGAAATCGGTGTCGCACCTATAAGAGATGCGTGGATTGAAATTACGTTCCAAGCCGATACAGCTTTGTTCTGAACTGTCGCAACTCTTATTGGTATATATTCAAAGAGCCCAAAGCTCAGTGTTTGAATGTGTTGTAGATGTAACCAAATTTACTACTTTAAAAATGGAATTAATTAAAATTATTGATGAAGATGAGGATAGTCTCAGATTTTATCAGTTAGGTAATAACTATAAAAATAAAGTCACGCATATCGGTGTAAAAGAATCAATTGATTTAGAAAGTCCTTTGATTTTTTAGGTGCGAACGTATAGCACACATGGAATCCCTCGTACATTCGCACTTGAATTTTCATAATTTATAATTAAAATTTGTGATTTTCCACACAAATTTATTTATACAATTAAAAAAATTCATATTTTCGAACCGAATTAACGTATTTTTATATGATTTTTAATACAAATCGGT # Right flank : CATTTTGAGCTACCTACTGCTTAATATATAACATTTCATATTTCGACTCTTATCCTTCTCCTGCTCATCTTTCGAATTTTCTTGACGTTTATTCAAATGAAAATAAAAAAGCTGAATCCCTTCTCACAGAAGAGGTTTCAGCTTTTAGTTTTTTAATCATACCCTTTGCAACAAGGTGCAATTATATTTCAGTGTATCCGCACCTTGTAGCTATTATTATGTATGCTATATTCCACAAAATAATTACAAAAACTCTATTATTCTCTCCATCTATTTTCATTGTATGCACCAACGGGAAGACATATGCACCATCCTCGGTGAATGTGTATAAATTACATTGAAAGTGTCAAAAATAACAGTTAAATAGGATTAAAGAAAGGAAGGCACTTTCATGAAAGGAAAAAAGAAAAATCGTACAAAGCTTGGAAAATGGTTAGATCAAAATGGAATAGAACAACAGGAATTAGAAAATGCAACTGGTGTTAGTCGTAATACAATTT # Questionable array : NO Score: 7.48 # Score Detail : 1:0, 2:3, 3:3, 4:0.51, 5:0, 6:0.25, 7:-0.60, 8:1, 9:0.32, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTCTTGTAGGTGCGTGGATTGAAAT # Alternate repeat : GTCGCACCTTTTGTAGGTGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTCATATAGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [24-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 29205-27792 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADAXH010000014.1 Bacillus sp. 8YEL33 14, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 29204 32 90.6 33 .........T....T......C.......... GCTTCAAACCACCGTAACTTTTGCCTTAGATCT 29139 32 90.6 34 ............G....G...C.......... CAGGACAGCAAAGCAATTTATGAATATGTAATTA 29073 32 71.9 34 ....TC...A.A.G..C....T.TG....... ATTCCAAAAAACAACCATAAAAAGGCTGTAGCAA 29007 32 87.5 34 ....T............G........A...G. ATATAAACGCATTTCCAACTTTCTAATGCATTTG 28941 32 96.9 34 ......T......................... TCTCGTATTCTTCTTTTTTCGTCAAATGTCTGTT 28875 32 96.9 34 ..............T................. CGTACTGTATATGCAGCTTATCGTCAAGCTACGC 28809 32 93.8 34 ...................T.T.......... TTCTATAATATAGCGGTTCGTCAACAAATTCCCC 28743 32 87.5 34 ............T.......TC.....A.... ATTTGGTTATTGTACCTAACAATATTTGCTGCAA 28677 32 81.2 34 A.T...T.......T......T.....A.... AAGAAATCATCTAATTTAATTTGAGCATCAGTAT 28611 32 96.9 34 .....................T.......... AATCTTGTAAAAGGGTTGAAACGTACTTTCAAAT 28545 32 96.9 33 .....................T.......... CTGACGCCCGGTAGTCGGTTAACCCGTTATAAC 28480 32 93.8 34 ..........C.G................... CCTAAAAACAATTCCTTATATCCGGTTATGACAA 28414 32 87.5 33 ..A..G......T...........G....... ACAATTTTATCAAAATAAGAAAAAACTATTTGA 28349 32 84.4 34 ........C...GCG....T............ GTATCTATGTAGTCCCTCCACAATTAGATTGAAT 28283 31 78.1 34 .........T..G.T..-.GA..T........ CAGTGTTGCTACGCTTAGTGGACATCCCTAGATT 28218 32 68.8 34 C..TT.A...G.GCT..C.T............ TTCGAGGCTGATCTTAGAAAAACGCTCCGGCCAC 28152 32 100.0 34 ................................ TCTGGTTGTGGCTTATTCTTTGGTTGTGGCTTAT 28086 32 90.6 34 A..........CT................... ATGGATAACTCTGTATAAAGGTGCTTAACAAAAA 28020 32 87.5 34 ...A........G.G..G.............. AGGTGAGTATCTCACGTTCCAACAAGTTAAGGAG 27954 32 90.6 34 .....G......G......T............ GATGTATTTACGTATCAGGAGTTAACGGACCATT 27888 32 100.0 33 ................................ CGAACAGCTCCTTTTATCTATTATGAAATCGGT 27823 32 84.4 0 .........A.A.G..A....T.......... | ========== ====== ====== ====== ================================ ================================== ================== 22 32 88.9 34 GTCGCACCTCTTATAGGTGCGGGGATTGAAAT # Left flank : TGATCCGATTGATATTACTAGTATGCAAATTACGAAAAGTGTAAATTCTGAGCCTGGGAAGGATAAAGGTTCAGATACGATGGGGATGAAGCATCGTGTTGATTTTGGAGTCTATGTTTTTTATGGCAGTATTAATACACAATTAGCAGAAAAGACAGGTTTTACTAACGAGGATGCGGAAAAAATTAAAAATGCACTTGTTACATTGTTTGAAAATGATGCTTCAGCGGCACGTCCTGAAGGAAGTATAGAAGTACATAAAGTTTGTTGGTGGGAGCATAATTCAAAGCTTGGCCAGTACTCGTCCGCAAAAGTACACCGTTTACTGGATATTAAACGGAACATTGATGAACCTAAAACAATTGATGACTATACCATCTTGATACATGAATTAGACGGTTTAAGAGTTGCAATTATTGATGGACTATAATGAAAAGCATTAGAATAGTTGAAAGAAAGTATACTTATAAAGAACTACTCTATCAATTTATTAAAGGAAA # Right flank : TACGTTCCAAGCCGATACAGCTTTGTTCTGAACTGTCGCAACTCTTATTGGTATATATTCAAAGAGCCCAAAGCTCAGTGTTTGAATGTGTTGTAGATGTAACCAAATTTACTACTTTAAAAATGGAATTAATTAAAATTATTGATGAAGATGAGGATAGTCTCAGATTTTATCAGTTAGGTAATAACTATAAAAATAAAGTCACGCATATCGGTGTAAAAGAATCAATTGATTTAGAAAGTCCTTTGATTTTTTAGGTGCGAACGTATAGCACACATGGAATCCCTCGTACATTCGCACTTGAATTTTCATAATTTATAATTAAAATTTGTGATTTTCCACACAAATTTATTTATACAATTAAAAAAATTCATATTTTCGAACCGAATTAACGTATTTTTATATGATTTTTAATACAAATCGGTGTCGCACCTTTTGTAGGTGCGTGGATTGAAATTGTTTATGTTCGTTATAGTCGAACTTATGAAAAGGTCGCACCT # Questionable array : NO Score: 7.86 # Score Detail : 1:0, 2:3, 3:3, 4:0.45, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.15, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCTCTTATAGGTGCGGGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTCATATAGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [25-33] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //