Array 1 181514-183435 **** Predicted by CRISPRDetect 2.4 *** >NZ_PXNV01000003.1 Klebsiella sp. CVUAS 10191.3 NODE_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 181514 29 100.0 32 ............................. CATGAGCTGGGCGAGCTGCCGGTGATCAACGT 181575 29 100.0 32 ............................. CCTTCACGTCGGCGCTCCCCTTCTGCATTACG 181636 29 100.0 32 ............................. GTGACACGGTCGCCAAAATCACCGGCGTTTAT 181697 29 100.0 32 ............................. TGAATTTTTCCTTTCCGAACGGCATCTGCGGT 181758 29 100.0 32 ............................. TCTGTTTGTCTAAGCACGATCGTCCCTCGCAT 181819 29 100.0 32 ............................. AAGGGGAAGAAGTCACCGCTGACGGTGCCGGT 181880 29 100.0 32 ............................. ATTACGCCGCGCGTTCAGCCGCATGGTTTTAT 181941 29 100.0 32 ............................. TTGACTCCTGCGCCAGGTCGGGGCGCTGCCGT 182002 29 100.0 32 ............................. TTACCGCAAACGCGGCGCATAGCTTGATCACG 182063 29 100.0 32 ............................. CCGATCAAAGTCAAAACCGGGATCGTGATGCC 182124 29 100.0 32 ............................. CATCGCCCCGAGCTTATCCCGGCATATCGTGA 182185 29 100.0 32 ............................. GCACTGAGGACAGAGGCGTGTAGTGTCAGAAT 182246 29 100.0 32 ............................. ACCATAGAACCAAAATCAACCTCAGGGTCAGC 182307 29 100.0 32 ............................. ACAACGCACCGCGGCAGAACAGCGAAAAGTTA 182368 29 100.0 32 ............................. ACCACGAATGAAAATGTGGCCAGGAAAGCCGA 182429 29 100.0 33 ............................. GTTGGCCAGGCATACGCAGCAAATGCCATTGCG 182491 29 100.0 32 ............................. ACTTGTTCAGAAAAAACCCCATTAGGAGGTTA 182552 29 100.0 32 ............................. GGTGCTTGCCTGGGTAAAACTGAACAGGCTTA 182613 29 100.0 32 ............................. ACCATTCTCATCATTCACGGCACGCAGTTAGT 182674 29 100.0 32 ............................. CCGTTGATTTTTTCCGACGCTGGCTCAGTCTC 182735 29 100.0 32 ............................. CGCTTCCGTTTCCTGAGCATATAGGTCGCCAT 182796 29 100.0 32 ............................. CGACCGCCAGCGGCGTTGTTAAACACGCCTGG 182857 29 100.0 32 ............................. GTGATTCCAGCGTTAACCCGCAACAGTTCATG 182918 29 100.0 32 ............................. TAGCCCCTTCGAGTGACGGGTATTCCTGACCG 182979 29 100.0 32 ............................. CGTTGGATCGACGATGACTCCCCGTTAAAAAT 183040 29 100.0 32 ............................. TGAAAGAATTAACGCCGGGAGAAATGACGGCA 183101 29 100.0 32 ............................. GGTACTGCCCTGCACTGTCTGCTGCTGGAGCC 183162 29 100.0 32 ............................. ACAACGCAGCCAACTGAGATTCAGAAGGCAGC 183223 29 100.0 32 ............................. CGATCCACTTTCTCACCGCAGAGCAAAAAGAA 183284 29 100.0 32 ............................. CCTGCCGTTGACGTCAGACATCAGACACTAGC 183345 29 96.6 33 ............................A GCTCCCGCTGGACGCTTCGACATGTCTGCGAAT 183407 29 82.8 0 .....G......TC.......G.T..... | ========== ====== ====== ====== ============================= ================================= ================== 32 29 99.4 32 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : GTGCTAGCTGCTGGTGAGATTGAGCCGCCTAAGCCAGCGCCAGATATGTTGCCGCCGGCGATACCAGAGCCACAGCGACTCGGCGACGGCGGGCATCGGGGGCATGGCTGATGAGTATGGTAGTTGTTGTTACGGAAAACGTGCCGCCGCGCCTGCGAGGACGGCTTGCCATATGGTTGTTAGAGATTAGGGCTGGCGTCTACGTCGGCGATGTTTCAAAACGTGTGCGGGAGATGATTTGGCAACAGATTACGCAATTAGGCGGCGCTGGAAATGTTGTTATGGCCTGGGCGACGAATACAGAGTCCGGTTTTGAGTTTCAAACTTGGGGAGAAAATCGACGTAGTCCGGTAGATTTGGACGGCCTGAGATTGGTTTCTTTCCTTCCCATTGAAAATCAGTAAGTTATAAGTTCTTTAATAAAAAGGAATTGTAGAACATAAGTTGGTAAATTGTTGCTCTCTGAAAATTGTAATAGAAAACAAATATATATATTTAGA # Right flank : GGTTTTTTCCCATACGCGCTCCGCATTCAGGGAATGTTCCCCGCGCCGCCATTCTTATTATCCTGTACTTTATTTTTTTACGTCATTATTTAGTGTGGCAAAGTCCAGTTCCAGTCAATACTTGCCAAAATTTTTGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACAGACGTTTTACCGATGCTGGGTTCTGAGCCCAAATCCAACCCGTCGTGCCAGACGCGCTGCCAGATATAAACCTGGTTGTCGGCGATGGACCGCGCGCTGGCAGCCAGTAGTAGAAACAACGGTATTAAAAAGCGAAAACGCATCATGGCGACAGTCCTTGTTGCCAGATTTTATCGTTAGTCTATTTTGAGGTGGGCTTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATCCGCCCCGGCAGCGCTTTATCAATATACTGCAGGTTATCCAACTGAAGGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 111785-112606 **** Predicted by CRISPRDetect 2.4 *** >NZ_PXNV01000011.1 Klebsiella sp. CVUAS 10191.3 NODE_11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 111785 29 100.0 32 ............................. CCAGAATACCGAACTGGCTAAAGTAAAATACC 111846 29 100.0 32 ............................. CGTATAGACGTACAGCAGCGCAGCCAGCGCGA 111907 29 100.0 32 ............................. TCTGGGACAACCTCGGCATCTGGTGCTGGCTC 111968 29 100.0 32 ............................. CTTGGCGATCCTGTTCGTGAGGTATTCGGAAG 112029 29 100.0 32 ............................. ATTGACCAGGCTTCCGCTGACCGACTGTTGAA 112090 29 100.0 32 ............................. GCACTGACACACGAGGAGCTTTGCCAGTTAGC 112151 29 100.0 32 ............................. ACTCCCTTCTTGCCTGCTTCCACTGCTCTGAT 112212 29 100.0 32 ............................. TTATCTCAGGATATGAGTAGAACAGCAAAAAA 112273 29 100.0 32 ............................. GTTTGTTTCTGTCTCTTCGCGCATTCCTTAAG 112334 29 100.0 32 ............................. AACGGGCGCAGATATCCATAGGTCCACGTAGC 112395 29 96.6 32 .........A................... CCGGTACCGCGCACGTCAAATACTGAAGATGG 112456 29 100.0 32 ............................. CCTATGAAGTCAGCAACCTCGGACGGGTCCGC 112517 29 100.0 32 ............................. GCGGTGAACTCAGTTGCAAGTGGGCAGGGTGA 112578 29 93.1 0 .............T..............A | ========== ====== ====== ====== ============================= ================================ ================== 14 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGCGATATCGCGGTGTTCTCAAAGGGCAATATTCAGCGCCTGGTCGGCGCGCTGGCGGAGAGCCATCGCCTCACGCTGCAAACGCGTTATCAGGTTGACTATATTGAAACGCTTTACGGCCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACCACTCACCTTCAGGATCCGGCGTTAAAGGTGGCGCAACTTCAGCAGCCGGCGCTGACGCGAACCGTGGCGCTGATGCGCGGGCCGCAGCCTCTGCCGCCGCTGATAGAAGCGTGTTTTACATTATTACTGAGTTCGCTGCGGGAAGTGAATCTGTAGAGGCCGTTGCTCTCTCAGCTTGTTGTGGTGAAATGCGAGAGAGGTAACGGAATAGTTTGTTGTGCCTTTTAAAATCAAATAGTTATGGCTCTTTAAAAACATCAATTTGTTGCAAAAATGTCGGTAGATTGTTCTTGGTGGATAAATTTATTATAAAACAATAAGATATGGTTAGT # Right flank : ACAGTCAATGTTTCCCGAACATGGTTCTAAAGAGTGTTCCCCCGCAGCTGGCCGCCGCGGGGGCTGATTTACGGCGTCACGATATTGAACCAGAACTCAAATTTATCCATATAGCCCAGCATCTCATCCAGCTTCGCGCCATCGCCGGTCACTTTCACTTCACCCTTATCTTGCGCCTGTTTTAGCGTTTCCTCTTTCAGGATGATTTTGTTCAGCGTGGCGCGTTCCAACGCAATGGTAGCATCCGCGTCCTTGGCTTCGGCATCGGCGGTGTGGTTGAGCACGCCGTTTTCCAGCTCCAGCTTATATTTACCGCCATCGTTACCCAGGTCGATATTGAACACCGCTTTGGCGGTTCCGGCTTTCTCACCATTAATATGCACCGCAAGGTAATCGAAGAACATTTCCGGGGTCATCGCCCGTACGGTATCCGGGCTGGCGGTGTTCGGCGTCGGGCCTTTCACTACGCCGTTGCGTAGCTCCTGAGCGCCGGTCAGGTA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //