Array 1 20452-22061 **** Predicted by CRISPRDetect 2.4 *** >NZ_SRZK01000020.1 Streptomyces sp. 1AS2c 1AS2c.1_20_DSM105299.00020_1AS2c.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 20452 29 100.0 32 ............................. TGGTGCTGGCGCTCCAGTACGGCGTCCCCCAC 20513 29 100.0 32 ............................. CGGTGACCCAGCCGATCGCAGCGGCTGCGGCG 20574 29 100.0 32 ............................. CGGATCTCCGAGGCCGCCGTGATGGGTGCGCG 20635 29 100.0 32 ............................. GCGCCGACCGGCGACCGGGACCACCACGCGGG 20696 29 100.0 32 ............................. TTCATCCCGAGCAGCGCGCGGACCGCGTCCGC 20757 29 100.0 32 ............................. GCGGTGTCACGCATGGCCCGGAGTCGGGCAGA 20818 29 96.6 32 .C........................... TGCTCGCCAGCAGCACCCCGCCCCCGTCGTAC 20879 29 100.0 32 ............................. CCCAGCCCCACGCGCGACCAGTACCTGGGAGC 20940 29 100.0 32 ............................. GGGGTGCTCGCCAGCGGGGGAAGCTGCTCGAT 21001 29 100.0 32 ............................. GACATGGGCCGCATACGGATCGCCTCACGCAG 21062 29 100.0 32 ............................. CAGGAGTCCGGCGGTAACCCGCGGGCGGTCAA 21123 29 100.0 32 ............................. TGGACTCCGACGACAAGAAGACCCGGGACCGG 21184 29 100.0 32 ............................. CACTACACCGGCCCGGTCCGGCAGGAGAGCAC 21245 29 100.0 32 ............................. GAGTAGCCGTTCATCCGGCCCGTGCTGGCCTC 21306 29 100.0 32 ............................. TCGAACCAGCACCGTAAGAGGGGAGGGCAGCA 21367 29 100.0 32 ............................. CGTCCTGCGCGCCCGCCATGTCGCCCCGTACC 21428 29 100.0 32 ............................. ATCTCGACACTGAGCTGTCCCGCATCTACGAG 21489 29 100.0 32 ............................. AGGCCCGCGAGGGGCTTACGCGCGGCCACGTC 21550 29 100.0 32 ............................. CCGAGGGCGCTGGCCACCCCCGTGACCGGCCT 21611 29 100.0 32 ............................. ACACCTTGCGTGTCAGGACTCCGTACCGCTCG 21672 29 100.0 32 ............................. GTCCTGGCCGGTGCTGCCCTGCACTGGAACCC 21733 29 100.0 32 ............................. GCGCCGAGCCTCAGGAAGGCGACGCCCTGACG 21794 29 100.0 32 ............................. GCCTGCAGCTCGGGGCCCCGTTCACCGACCCA 21855 29 100.0 32 ............................. CGTCGCGAGGAGCCATCACCACAGGTGGTGGC 21916 29 75.9 32 .........A..TG.A.......AG...T GCCTCACGGTGAGGCATTATGGGGTGGTATCC 21977 29 86.2 25 .CA.....................AC... TAGGGCGACCCGTACTACGCGGAAG Deletion [22031] 22031 29 86.2 0 .....................T.CCA... | T,A [22034,22036] ========== ====== ====== ====== ============================= ================================ ================== 27 29 98.0 32 GTCGTCCCCGCGCACGCGGGGGTGTTCCC # Left flank : AGAACACCTCGCCCGACGCCCCGGCCCCGACCGCCCGCCGCATCCTTATGGAATGCACCGACTGCGGCCGCCCCGGCCAACCAGAAGCCCTCCCCGACGGTCTCTGCCGCCCCTGCCGCGAAGCCCACAGCATGAAACCCGGTGAACCCCCGGCCCACCCCACTGAAGCCGCCGACGTCAAGGCTCGTATGAGCAACCTCCGCGACCTGCTCAGAACTGTCTGAGGTTGAAGCCTGCAAGGTCAGTTCGCGCCAGCAGAGAGCGCGAACACGTATCGGGGCACCGGCGCGGCAACCGTTCGCCTTCACAGTTTCCTGGGCAGATGCCGCACGGCCTTCCTTTAGGAAGGGGGCGCCCCCGGCGGTGGTTGGCGGGCAGAATGACCCTTGGCATGCCCAGTCTCGGGGAAGGGCTGTTTGCAACGTGGGAGGGATATGTCCGTTTCTCAAGAAGTAAGTAAAAACAGCCCCTCAGCCACATAAACCCCCAGGTCACGAACT # Right flank : CGATCTCGACGGGTCACATGAGTACCTGAAGCCCCCTGTAACTAGGGGGACACTTACTCTGCTCAAGAATCAGGCGCTCAAGGACACACCGAATCGACAACATGTCGAGCTATACGGGCTCAGGAAACTACTGTCGCGGTATCGGGAACACACAGACGCAAGTAGCGAACTCGATGTAGCCCTCACCTGCCTTCAAGGGTCAGGAAGTCCACACACGCCGATTTACGGCTAAGCAGCAAGGAGCCTCCAGTGAGCAGAAAAGTCACACTTACCGGACAAGACGAAGGCGGGCAGCCGCTGTTCGCCTTCTCGGTATCCGCCCGACTGGTCGCACATCCAGCACTCTTCCTGCTGGCCTGGGCAATTGCCGCCATCACAGCCATCGCCTCAGTCGTCATGCTTTTCCCAGCGCGCTAACGGTCTCAGACCCAGAGCCACACTTAGCCTTGCGGTCGCCCCCCCGGCAAGCAGGGGCGACCGCAGAGTCGTTCAGAGGAGAC # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCACGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 890-1530 **** Predicted by CRISPRDetect 2.4 *** >NZ_SRZK01000399.1 Streptomyces sp. 1AS2c 1AS2c.1_399_DSM105299.00399_1AS2c.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 890 29 100.0 32 ............................. CAAGTCCGGGCTGCTTTTCACTGCCCTGAAGG 951 29 100.0 32 ............................. TCGGTGACCCTGGCCTTCTGCTGGGCCGGCGT 1012 29 100.0 32 ............................. GCGCGGCCGTCCGCCCCGAGCCTGAGCGCGCT 1073 29 100.0 32 ............................. GCCAGCGCTTCCGGGTTGGTGCTGGCACGGCG 1134 29 100.0 32 ............................. CGGCTGGAGGTGTCGGTTCACGACGACTTGGC 1195 29 100.0 32 ............................. AACCCCCGGTACGGCACGTCGCGCGGGCTGGC 1256 29 100.0 32 ............................. GGGCCTGGATCGAGGTGGCCGCCTCGGTGACC 1317 29 100.0 32 ............................. CGGACGGGGACGCCCACGGCGGTGCTGTCGGC 1378 29 100.0 32 ............................. AAGGCGATCGACTACATCCGCGGCAAGGACAT 1439 29 100.0 33 ............................. CCTGCTATGCCCCCCAGCGCACAGCACATGAGT 1501 29 86.2 0 ................G.....C.AA... | G [1516] ========== ====== ====== ====== ============================= ================================= ================== 11 29 98.7 32 GTGGTCCCCGCGCACGCGGGGGTGTTCCC # Left flank : GGGGTCCCGGCCCGAAGCTCGGGTTCCGGGACGCGGGCGTCGGGATGCGAGCCCCGAGACCCGAGCGCCTTCTTTAACCGGCAGGTAGAAGAGGGGGTTCGGGAAAACCTCCCGCCCTCCCCACCCAGGTCACAGCTGCGGAACCCCGGGACCCCCCGAAGCCCTCCCCGACGGCCTCTGCCGCCCCTGCCGCGAAACCCACAGCAACGAGACCGGGACCTCCCCGGCCGCGCCGGCCGCAGCCCCGGACGTCAAGGCCCGCATGACGAACCTCCGGAACCTCCTCCGAAGCGTCTGAGGAGGGCGCCAGCTGATCAGCATCGATTGAGCGGCCACTTATCGGGGAACGGAGCCGCCGATCTCGGCCAACAAGGGCAGAATCTCTCCAGGCAGGCCCAGAGTCCGGAAACGGCCACCTGCACAACGAGGGAGATGTGTCCGTTTCTCAAGAAGTAAGTAAAAACAAGCCGCACGCCACATAAACCCGCAGGTCACGAACT # Right flank : CGCCTCCGTAGTCGCCCCCCCCACCAGGGAGTAGGTACACCGGCACCCTGCCTGTCCGGTTGTCCGGGCAGCCCGCGAGTCCCGCTGAATCCGGGCTACAGCGCCTCGCCGGGAATCGACAGACAGGCCTCGCGGAGGCGGTCCAGCAGCGGGTGTGCGGCGGCGAGCGCGGTGTCGTCGAGCGCTGCCAGGGGGCGGACGCCGATGCCCGCGTTCGTCGCGAAGGCGGCCGCCATCCCATAGGCGTCCTCCAACGTCAGGTCCGCGTCGCGGTGTTCGGCGGGCGGTGTCGGGTGCTCGCGCAGCAGGGCCTTCGTCACGCCGGGTAGTACGGCGGATCGCGGCCACAGCACGGTGCCGTCCCCGTCGATGAAGCCGACGTTCCAGGTGGCGCCCTCGGTCACGTAACCGTCGCGGCCGACGAAGAGCGCGTCGTCGTACCCGGCGAGCTGCGCCGCGCGCCGGGCGTGCAGGGCGCCGAACAGCCCGGTGTGCTTGAC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 6106-6501 **** Predicted by CRISPRDetect 2.4 *** >NZ_SRZK01000105.1 Streptomyces sp. 1AS2c 1AS2c.1_105_DSM105299.00105_1AS2c.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 6106 30 96.7 31 .............................T GCTTGACGCGTTTCCGCAGGTCAGGGCACCC 6167 30 96.7 31 ............................T. ACCTCTTCGGTCGGCGGCCGCAGCGTCGAGG 6228 30 100.0 31 .............................. CCCAGGAAGGTCTGGTCGACGCTCAGCGCGA 6289 30 96.7 31 .............................A CCCACTGCCCCCCCGACTTGCTCGTCAGAGT 6350 30 100.0 31 .............................. TGGTCTCGGTGAAGTCGGCCCAGGAGTCGAA 6411 30 96.7 31 ..........T................... GGTCGATGACGGCGGGACGTCCGCCGCCGAA 6472 30 93.3 0 .....................C.......A | ========== ====== ====== ====== ============================== =============================== ================== 7 30 97.2 31 GTGGTCCCCGCGCACGCGGGGGTGGTCCCG # Left flank : TACCTGACCACCGCCCTCACCGCAGGCCTCCCCGCCGAGATCAGCTCCCCCGTCGGCTTCCTCCGCCGCCGCCTGACGGCCAAGCTCCCACCCCACCTGCCCCCGGAGGCCACCACCCGCCCCGCCGCTCCCTCCGGCCGCGTCCTGGTGGAATGCACGGAGTGCGGCACCCCGGGCCCCTCCGAGGCCCTTCCCGACGGTCTCTGCCGCCCCTGCCGCGAAACCTGTGCCACCGGCCCCGGCGACTCGCCGCCCGTCCTGCCCGCACCACCCGACATCAAGGCCCACATGGCCAACCTCCGCACCCTCCTCAAGCCCGTCTGAACCGGACGGCCGCCGATTCAGGGGAACGGGGGTCGGCCTTGGCGACCGAGGGGCAGAATCACTTGCGGCAGGCGGGCAGGCCGCCAACGGCGATCAGAACGGCGGGGGATATGTCCGTTTCTCGAGAAGTAAGCAAAAACAGCACCCCGGCCGGATAAACCCGCAGGTCACGAACT # Right flank : ACCCGCGCCCGATCCGACCCACGGATCCGCACGTGATCCCCGCGCGCGGGAATGCCACCTCTACGAAGCTGGGCTCCTGGCGGTCGCGGTTCTCTCGGTGGTGGCGGGCCGTTGCACGTTGCCAGGCCGATCGCGACGGTCCGGGGAAGCCGCGACCGTACTGTCTGACCACCAGCCGTCACGGCACGGTTACGGCGCCCGTATCATCCCGCCATGATCATGCTATCTGTCGACCCTGCCGCGCGGAGCCACGCCGATGGCCAGGCGGTGGGGCAGCTTCTCGTTCTCGCCGTTGCTCTGGTCCTTGTCTGGGTCGTCACCCGGACCTGGCGGCGAGGTCCGGCCCCGGACGGTCCGGACGACGTGGAGAGAACCACCGCCGTCGCCGTACGGCGTGGCAACATCGTTCGCGGAGTGCTGCTGGCCATAGCCGCCGCCGGGCTGATAGGGATCTTCACCGGCAGGGGATACCAACCTGCCGCAGAGGCGGCCCCCACCGC # Questionable array : NO Score: 5.68 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCACGCGGGGGTGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGGTGGTCCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 4737-3488 **** Predicted by CRISPRDetect 2.4 *** >NZ_SRZK01000074.1 Streptomyces sp. 1AS2c 1AS2c.1_74_DSM105299.00074_1AS2c.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4736 29 96.6 32 .G........................... ATCCTCGCGCTCTCCTCGCCGGACGGAGACTC 4675 29 96.6 32 .G........................... CCCAGCCCGGTCCTGTCGGTGGAGTGGGCGGA 4614 29 96.6 32 .G........................... TACGACCCCGCCAACGGCACACACGCGGCGCT 4553 29 100.0 32 ............................. GAGACGCTCGGCTCCAGCCAGTCGGCCACGCT 4492 29 100.0 32 ............................. GCTCGGCCTGTACCGGGCCCGCACATGAGCAT 4431 29 96.6 32 ............................T ACTTCCCGATGTTCCGGTACTCCGGGGACTGG 4370 29 100.0 32 ............................. TCGTCGTGGTCGAGTTGCACGGCGGTGCCCCG 4309 29 100.0 32 ............................. GGGGTGTGGGCGAGCCACAGCAGCGCGGCGCG 4248 29 100.0 32 ............................. GGCTGGAAGCCGGGCGACGCGTGGGCGGTCGA 4187 29 100.0 32 ............................. TCCGGCTCGTGGGAGCTGGTCAAGGTGCTCCA 4126 29 100.0 33 ............................. GGCCGATGTAGATACCTCGGGACGGTCCGCAAT 4064 29 100.0 32 ............................. ACACCACATCGACCCAAAAAAGGGGCCCCAAT 4003 29 100.0 32 ............................. CAGAGGTCCGGGTCCTGGAGGCACGGCTCGTC 3942 29 100.0 32 ............................. ATCTGGCACGGGGCGATCCGCTCGGGGAAGAC 3881 29 100.0 32 ............................. AGGCACAGGCTCTGTCCCTCGCTGACGTAGTG 3820 29 100.0 32 ............................. ATCCGGCCGGTGGCGAGGACTGCCCGGGGCGA 3759 29 96.6 32 ................T............ CTGAACCGGTGGCTCCCGAACGAGACCATCAA 3698 29 96.6 32 ........T.................... GTAGAGCAGGCCGTCGGCGCCCTGGGTGACCG 3637 29 100.0 32 ............................. GTGACGGCGGCCGAGCCGTCCGTCACCGTCCC 3576 29 93.1 32 .....................A..A.... AGTAGCCAGCTGACCATAGTCGAGCCCTGTTC 3515 28 69.0 0 ...........C.AC..C...C.-A..GG | ========== ====== ====== ====== ============================= ================================= ================== 21 29 97.2 32 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : GCCCTCACCGCGGGCCTCCCGGTCGAGATCAACTCCCCCGTCGGCTTCCTCCGCCGCCGCCTGACCACCAAGCTCCCCCCGAACCTGCCCCCGCAGACCGCCCGCCCCACCCCGGCCACTCCCGCCACCCGCGTCCTGGTCGAATGCACGGAATGCGGCACCCCCGGCCCACCCGAAGCCCTCCCCGACGGCCTCTGCCGCCCCTGCCGCCAAACCTGCGACACAAGCCCCGGGAACCCGCCACCCACCCTGACCACTCCAGCCGACATCAAGACCCACATGGCCAACCTCCGCAACCTCCTCAAGCCCGTCTGAACCAGACGCTCACCGTGCTGCTTGGTCTCAGGGAAACGAGGGACGGTCTCGGCAGCCGAGGGGCAGAATTGCCTATGACAGACGAGCAACCGACCAGCAACGGCCCGTACGGTGAGGAAATGTCCGTTTCTCAAGAAGAAAGTAAAAACAGCACCCCGGCCGGATAAACCCGCAGGTCACGAACT # Right flank : CCCACCAGCCCCCTCACACCCCCAACTCCCCCCGCGAATCCGCAACCGCCTCCGGATACGCGGCCAGCAACCGACGGGCCACCGGCAGTGGCATCCGCACCACCACCGGCTGCGGGAGCGTCAGTTCGCGTTCGGCGACCGCCGTACGCGATGAACGCACCCGGTCGGTCACCCGTGCCACCACCCGGACGTCCAGGGTGAACTGGACCAGCACCGAGGCGAACTTCGGCTTGTGCAGGGGCATCGAGCCCGCTCCGCTCGCCGATGCGCCGGTGGCCGAGCCCGAGCCGCCCCCGTTGGCCATCAGTTGGTTGAGGCGGAACTCGTCGGCGTTGAGGACTCCGGCGCCGAGGAGGCCTCGGGCCTGGCGGCTCTTCTCGGCTGCGGACTGGGCGTCGGTCTGGGTGGGGCGGGGGGCGGTCAGGTCGCTCTGGGCGACCGTTTCGAACGTCATCTTGTCCCCCGCCCCGAGGATCCGGCCGGCTCTCAACCGGGCGTGG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 7352-6408 **** Predicted by CRISPRDetect 2.4 *** >NZ_SRZK01000074.1 Streptomyces sp. 1AS2c 1AS2c.1_74_DSM105299.00074_1AS2c.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 7351 29 100.0 32 ............................. TTCGCCGCGTACCCGCCGATCGTCCTGGTCTC 7290 29 100.0 32 ............................. CGGCACCAGCTGGAGTGCCACACCTCCCCGAC 7229 29 100.0 32 ............................. GGTGGTCGCCTGATGGCTGTGGACCTGGTCAA 7168 29 100.0 32 ............................. ACGGCGTACCGGGGCGGGTACATGCACCTGTC 7107 29 100.0 32 ............................. GTGTGGTCGCAGCACCCGGACTGGCCCGCCCA 7046 29 100.0 32 ............................. TTCCCACCAGTGTCCGTTGTTTGTCGGTCCAT 6985 29 93.1 32 .................A..........T CTCCCCGCCAAGAAGCCAACCGGTGTCTGACT 6924 29 100.0 32 ............................. GCCTCGCCGTTGACCTTGCGGTCGTATGCCTC 6863 29 100.0 32 ............................. GCCTCGCCGTTGACCTTGCGGTCGTATGCCTC 6802 29 100.0 32 ............................. GCCAGCGGGGTACCGCCGCCCTGCGAGGTCTC 6741 29 100.0 32 ............................. ACGGCGTACCGGGGCGGGTACATGCACCTGTC 6680 29 100.0 32 ............................. TGGTACGCCAGTTTCGGCGCCCGTACTCCGGT 6619 29 100.0 32 ............................. ACCCTGGTCGGCCCCGGGGGTCTGACCGAGGC 6558 29 100.0 32 ............................. CAGCTCGCACTGGGACACGCCACGGGGTTCTT 6497 29 100.0 32 ............................. TTTACGGGCTTCTTCGCGATGCTCGCGATCTG 6436 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 16 29 99.6 32 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : GTCACCGCCGACCAGACGGCCGGCATGCCCGAAGCCCCCGCCTCGGCGGTCCGCGAACTGGTCGCGGAGTACGAGGACAAGGAGTCACCGGAAGCGATCTGTGCCCGCGACGCGGACAAGCTGGAGTGCCTGCTCCAGGGCATCGAGTACAAGGCCCAGGGCTACGAGAACGCCCAGCGCTGGATCGACAACAGCCGAAGGCGCCTCACCACCGGGACCGCGAACCGGCTGGCGGACGAGCTGCTGGCGCAGGACAGCATCGATTGGCTGCGAGCGACGCTGGGAGAGGAGAAGCAGAGCTAGCCGCAGAGCAGCCCCTCAGGGGGGCACCCATGAGCGGCCTTTCGGCGGTGACGATATGGCACTGTGGGCGTGCAGCCGGGTGAGGAGCCCGTTCGCTGTGTTCACTCTGGACCACCTACAACAAGGGAGATATGTCCGTTTCCCTGGAAGTAAGTAAAATCAGCCCCTCGGTGACATAAACCTGCAGGTCACGAACT # Right flank : GGGGCGATGACGATCCCTACCTTCCGGCACCCGTGGTCCCTGCGTACGCGGGGGATCCCTGCCTTGCCCGTCTCTTGGGTCCCGAGCCTCGGGCTTCGAGGCCGGTCCGTTCACTCTTTCTCGTGTACGGGTACGGGCATGGCCCGAAGCTTGGGCTCCGAGACGCGGGCGTCGGGACACGAGGCCCGGGATTCGAGCGCCTTCTTTAACCGGTAGGTAAGAGAGGGGGTTTGGGAAAACCTCCCGACCACCCCACCCAGGTCACAGCTGGGGAAGTATGACTAATGGTGGCGGCTTGCGGCGGAGTGTCACGAGTGCTTACGGTTCGAGAACTAAGCGACCCCGACAGGTGTTGGAAGCACCAGGCCGGGGTCTGACCGCAAGATCGCACACCCAAAAGGACGATCCATTGGCTACCCAGCACATTAGCTCTGCCCTGCAACCTCCCGCACTTTCCGACGCGTACCCCATGGCGAATCCGGGCTACGGAAAGCGCTCAG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //