Array 1 2192257-2196491 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT576042.1 Propionibacterium freudenreichii isolate PFRJS8 chromosome I, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 2192257 36 100.0 36 .................................... CCGCGGACATAGACCGGCCCCATTCCGAAGCCCACA 2192329 36 100.0 35 .................................... ACAGAAACGGTCTTGGTGCATGTTGCTGTCCTCTC 2192400 36 100.0 34 .................................... CTAAAACGGGACTGCTTGGCTGGTGATGATGAAT 2192470 36 100.0 34 .................................... ATGTCATCTGCCACCGCACCTGCTGGGCAATCGA 2192540 36 100.0 36 .................................... AGTGTTACGTGTTGAAGGGGTCCAGCCCTTCACGAA 2192612 36 100.0 39 .................................... TTCTCAAAGGCCGCTTTTGAGCTGACTTTTCAGGGGGCG 2192687 36 100.0 38 .................................... CCGCCGCCCTTCACACGGGTGGCCGGTGTGTGGTTAAA 2192761 36 100.0 38 .................................... TTCCACGTCCAGGCTCTGTGCCGCGAGCATTTCCAGCT 2192835 36 100.0 37 .................................... CGCTCGTGCGACCGCTGCGGGAAGCCCATTTTCGACG 2192908 36 100.0 36 .................................... TCACCGCGCTCTGACAAGGCCCGATACTTTCGCCCG 2192980 36 100.0 38 .................................... GGCGTGCAGCAGTCACTGCGCAAGTGGGGGCGTCGGGA 2193054 36 97.2 38 ....................A............... CGCGAGCGAGCCAAGGCCGAGGCCGACCGCTTCACAAA 2193128 36 100.0 37 .................................... TGTCGGTCATGATCCTGGTCCTTTCAGGGTCTGGGCT 2193201 36 100.0 36 .................................... CTTCTCCACCCGCGGCCAGGCCATCGCCTCCATCAC 2193273 36 100.0 36 .................................... TTTGTGTGGCACCGTGTCGGACACCAGCGTCCGGCA 2193345 36 100.0 36 .................................... CGAGCTCTCGTCCCTGCAGCTCGACGCGCTGGTCAA 2193417 36 100.0 37 .................................... AGGTGCCACATCAGCCAGAAGCCCAGCAGCCGCTGCA 2193490 36 100.0 38 .................................... TCGGCGCGGGCATTGGTGACTGCACCTCCGGCCTCGAT 2193564 36 100.0 37 .................................... TCCCATGTCATCAGAGGATCCTTTGGTAGGACAGGGT 2193637 36 100.0 34 .................................... TTGCCGACCAGCCCGGCGACCACGGTATTCACGA 2193707 36 100.0 36 .................................... TTCACCTGAAGCCCGAGGCGCTCCCGGATCCGGATC 2193779 36 100.0 35 .................................... TCTGAACCGCCGATAAGCACGGCCAGCCACCCGGA 2193850 36 100.0 36 .................................... GAGCTGATCGGCAAGGTCCCGACGCCCCCACTTGCG 2193922 36 100.0 36 .................................... GACGCCGCCGAAGACCGCGCAATCGACATCCTCCAC 2193994 36 100.0 36 .................................... ACTCCTTCTCGATAGTTCCTTGTCCGGTCGGCCCTC 2194066 36 97.2 38 .....G.............................. TTATCCGTTTCGACTGTCGCCACCGACTGCACCGGGAT 2194140 36 100.0 34 .................................... CGCGTCCGGATGCCGGGGTCACCCGTCAAACCAA 2194210 36 97.2 36 .....................T.............. TCCCACCACGCTGGCGATCCAGCCTTCGACCATGCA 2194282 36 100.0 35 .................................... TAATCTCCTCTGTAGGTGGAGGGACGCAGATCATA 2194353 36 100.0 35 .................................... CGGTGAGCTCCCTGACCCGCTAGATTTCTGTGAGC 2194424 36 100.0 36 .................................... GTGGGCGACGGGGTCGCGAAGAACCGTGGCTTCAAC 2194496 36 100.0 34 .................................... GCTGATCATCCAGCTGGTCGGCGGGATTGTCGGG 2194566 36 100.0 35 .................................... CAGGCGATCCGTCTGTCGAAGGACTCGAACGGCCA 2194637 36 100.0 36 .................................... GGTGGTAATTCCGATTGGTTTCCACCGTTTGATAAG 2194709 35 97.2 35 .................-.................. GACATGGATGGCGTGATCCGTGACTATGTGGCAGC 2194779 36 100.0 35 .................................... AATTCTACGGAGAACAGCAAGAATAATGGGTCGCT 2194850 36 100.0 37 .................................... GGGAGGGCGAGGCTCGAAGCGATGACAGCACTCGCCT 2194923 36 100.0 38 .................................... CCTGTTTTCGGGGCGCTTGAGGGCACGACGACTTTCGA 2194997 36 100.0 36 .................................... AGGCGGAAGCGCCACCATGCGACCCCCGTCACCCCG 2195069 36 100.0 37 .................................... AGGTCGCAGCTGCCGGTGATCTTGCCGAGGGTCTTGG 2195142 36 100.0 37 .................................... GAGCGTTGCCAGGCGGTGAAGGCTTTGTTGTCGCCGT 2195215 36 100.0 36 .................................... GTCGAATCAGGGAAGTAGGCGTTCGTTGCCGTTCAT 2195287 36 100.0 36 .................................... GTGCCATGTGGACCCCTCACCCCGACAAATTTCCTC 2195359 36 100.0 38 .................................... CGGGCCTGCTGGGTGTCGGGGTCGGGGTCGTCCGACGG 2195433 36 100.0 37 .................................... GCCAACCAGCCGGGATAGGCCCGAAAAACGACCCAGG 2195506 36 100.0 37 .................................... GCCAACCAGCCGGGATAGGCCCGAAAAACGACCCAGG 2195579 36 100.0 35 .................................... GACGACTCAAAACTTGCGCACCCACTGGATCACCT 2195650 36 100.0 35 .................................... GTCGGAGAGGTGTCCGGTGACCAGGTGACAACCGA 2195721 36 97.2 39 ...........................A........ GCTTCCGTTGGTGAACACCATTTTGGTTTGATTCCACTC 2195796 36 97.2 38 ......................A............. TCGTCGTGGGCGCCGGGCACGTCCATCTATCTGGCAAA 2195870 36 100.0 37 .................................... AAGATGAGCGGGCCGAGGGGTTCGACCCGGGACGCGG 2195943 36 100.0 38 .................................... TGATGCCCCAGGCCGGCGCGCAACTGCTCACCGAGCTG 2196017 36 100.0 40 .................................... AGGCGCCAAGGGAATGCGCTTCTACAACCGCGTCACGCTG 2196093 36 100.0 38 .................................... GTGAGCTCGGGCTGAGCGTGAGCCAGACAGCGGCAAAG 2196167 36 97.2 35 .....T.............................. AACCTGTGGGGCTTCCCGGTTGTCGTCACGACCGC 2196238 36 100.0 38 .................................... CGCACCAAGGCCCCGGCTCGGCGAGGGACGGTTGCCGT 2196312 36 97.2 37 ......T............................. GTCATGGTGTGCGCACAGAAACCTAGAGTACGGGCGG 2196385 36 97.2 35 ...................................A GCGAAAGAGCGATCATTCCGGGTATGGATCAAACC 2196456 36 94.4 0 .....T.A............................ | ========== ====== ====== ====== ==================================== ======================================== ================== 59 36 99.5 36 ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC # Left flank : ATATAGGAATGACGGTCAGATGAGCCGACGAGATTCCCATTGCTTTCTGATCGCCTACGACGTGCCCGATGACCGTCGTCGCACCAGGTTGGCCACGGTACTGAAGGGCTACGGGGAGCGTGTGCAGTACAGCGTATTCATGGTTGATTGTCCGCCGTCACACCTGCTGGTGCTACGCCACGATCTCACCGACGCGATGGATATTGATGAGGACTCGGTGGTGATCTGCGACCTGGGCATGTCCACGTCGGCAGACGCCCAACGCATCACCTGGTTGGGCGGTCAGAGGTACCAGAGCGGCGGACGCAGCATCATCATCTGACGACCAGCGGCTCTGCGGCCCGGTTGTCACGCGGAGCCGCTCGCGTGATGTTTCCCCTTGTCACAAGCAGATTGCGCTGAAGGGGTCATCAATCCTCCACGCGCGAGCCATCCTTCTTCAGCACCGCTCGCAGGCGGCCGGTATAATGCCTAGTGGGAGCCCTGTTCCCACGCCCGCC # Right flank : CTTGCGCCAGCTCTCGGAGACGATGGCGCCTTGACGTGGCGTTGCCCCTCTCCCCGGGCGAAGCCCTCCACCCGTTCAACGTCCCGAAACTCACGGAACTCCCGCCGGCGCCGAGAGCTAGACTCGCCATGAGAAGGTGGGAGGTAGGGCAGACGCCCAGCTGACCCACCTTCCCTTTTTCGCACCCCCGGTGGCGCCAAGAGCCACCGATTCCGTCCAACCGCCCACCCTCTCGTCCACCCGCGCGAGGACCCGTCACCCCGATCAGCGCTCACTGACAAGGCCACGTGGCCGCGCACGAGCCCTAGGCGTTTCCGGACCTGACAGCCGCCATGACAAGGCGTTTTCGTCACGCACTGGCGATGCCGGGACGTGCCCCCACACAGCTCCCCCCGCTACGGTTAAATCCGGCGGGGCCGGCAAGGCATGCCCCCTTCATTGAGGCTGACGCCAATAGATGGGCATTTGCGACACCCGCCAAAGTCCCTCCTCACGGAGGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCCCCTCCTTCTGGAGGGGCCCTTCATTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.30,-11.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //