Array 1 37160-36398 **** Predicted by CRISPRDetect 2.4 *** >NZ_RYYB01000001.1 Campylobacter sp. CH186 NODE_1_length_554125_cov_90.203573, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 37159 36 97.2 30 T................................... ATTTTAAGTTATTTTTGCTTATAAACGATA 37093 36 100.0 30 .................................... CTTAAGATAATTTTTTACCAACACCAAATT 37027 36 100.0 30 .................................... AAAGTCTTGAAGTAACTTACTGCCTATCAA 36961 36 100.0 30 .................................... ACTAAAAATTTTATTAAAAACAACAGTGAA 36895 36 100.0 30 .................................... CATAGTCCTTCACGATTTGAAAATACTTTA 36829 36 100.0 30 .................................... AACTTCTGTTCCAACTAATTCTCGATATAG 36763 36 100.0 30 .................................... TAAGAATACCTGCTGGAGTTTATAATTTAA 36697 36 100.0 30 .................................... GCGGAATGGTAGGAGATATCGAGGTTAATA 36631 36 100.0 30 .................................... TAGTTTTAAAGGCAGTGTTTATGAGTTAAA 36565 36 100.0 30 .................................... TACAGGGACACTAATATAAAAGAATTAATT 36499 36 100.0 30 .................................... ATTGAAAAATATACAAAAGAAGCTTTATTA 36433 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 12 36 99.8 30 GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT # Left flank : ACATAAAACCAGGTAGACATATCAAAATAGCCAAGGCTAATGAAAAATTCATCATCGCCTTACCAGGTTTTCCTTACTCGGCTATGGTAATGTTTAATCTTTACGCAAGAGAGATTTTAAACTCTTGGTTACTTCAACCTAAAGACTATATTTGCAAGGCCTTTTTACAAGGAAGTTACAAGAAAAAAACACCTTATTTGGAATTTGTCGCTTGTAATGTGGAATTTAAAAATGGACGCATTTTAGCCAATCTTGAAGGTAAGAAAGAAGGCTCTAGTGCGATTATAAACAATCTTAACAATAAAGCTGCCCTTATGGTGGTACCAAAAGAATGTGAAATTTTAGAAAATGAAAGTTTAGTGGATATTATCTTTATGCCTTAAAATTATTTAAATAATTTTATTTCGATTTTAATCAACCCTAAATTTCAATAAGTTTCAAATTTACAACCTCCTTTTAGTGAAGTAATTAGCCCTAGCAGAGTTTCAATCCACTAGGGT # Right flank : AGATATTTACCAGATAATGAAAATTTCGGGGTTTTTTCATGAAAAATAGCAAAAATTATGCTATAATCTCATAAGAAATTTAAAAAGGGACTAAAATAAAGAGTTTGCGGGACTCTGCGGGGTTACAATCCCCTAAAACCGCTTTTAAAATTCAAATAAATTTTGCTGATGATATTTTTCTTGTTTTTTGTTTATTTGAATTTCTTCGTTATTTGAATTTTTATATTTAAATTCTCCATGACTATCTATATCAAAAAGCGTTAAATTGGTTTCGTTATTAACTTTTTCGTTAAAAACTATGCCACCAAGCAAAAGCTCCATTTTATCAAACTGCTTTTCAGTGATGATTAAAGCCCTTACATTTCCATAAGGTGGCAAAATCTTTTTTACATTTTCAATAGAACTTTTTGCAGAACTTAAACCCTTGCAAATACGCATATAAACGCTAAATTGCAACATAAAATAACCTAATTTTATAAGATTGTTTCTAAATTTACTTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:78.38%AT] # Reference repeat match prediction: R [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //