Array 1 3385513-3385736 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ033902.1 Parabacteroides sp. HGS0025 aczIs-supercont1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 3385513 30 100.0 34 .............................. GGAGGAGGTAACGCATTTTTTTTCATTTCTATGT 3385577 30 100.0 34 .............................. TTAGCTTAGATATAAGTACAATCTTGTGTTGTTC 3385641 30 100.0 36 .............................. GCGGCAACCGGTCGGGGCGAACTTTAAATATAAATC 3385707 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 100.0 35 GGTTTAATTGTACCTTAGTGGTATTTAAAG # Left flank : CCGATAGGCTTGGGATATCCCATACCTTCCATCCTTCTCCATCTTGTCAATAATTCCCAGCGCATAAATCACAAACCCATTACGCGCCATCCCTTTCCTGATCCGATTCATTTCTTCCATACTCATTTTCTTGTTTAAATTGATATTGACATGGAATATAACAGAAAAAATGGGGGGATGGGTTTGGGAAATACCCCTAAGGAACAATTTACTATGCAAATATAAAAAACACCGGGACAAATTGGAGAATAAAACTTACAGGATATATTAATATAATGTATATTTGGAAGCTTTATTCTGTTTTAGTCGACTACAATGTAGAATAGCTGTCATCAACACAGTAGAAACATGTGATTTGGAGAGTATAAGAGGTAGATGATAGTTGTCGATCCCCAAGGTATTTCATACAATTGAAGGTCGACAACTATCATTGACAGAAAAGAAGGAACAAACAAAGCTAGGAGGTATTTAGAACAGGGGAAATCTATGGTTTCTATAAG # Right flank : GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTAATTGTACCTTAGTGGTATTTAAAGAATTAAGAACGAATGTGCCGTTCTCAACGCTTATTTGGTTTAATTGTACCTTAGTGGTATTTAAAGTTGAGAAGTATTTGAACACTATTGATGAATCTATGCAGGGTTTAATTGTACCTTAGTGGTATTTAAAGGCAGTACATTCAGGAGA # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTTAATTGTACCTTAGTGGTATTTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 2 3386053-3386416 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ033902.1 Parabacteroides sp. HGS0025 aczIs-supercont1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 3386053 32 87.5 34 NNNN............................ AATTAAGAACGAATGTGCCGTTCTCAACGCTTAT 3386119 32 93.8 36 TT.............................. TTGAGAAGTATTTGAACACTATTGATGAATCTATGC 3386187 32 100.0 33 ................................ GCAGTACATTCAGGAGAACACTACTATACCGGA 3386252 32 100.0 35 ................................ CAGCGTCTTTGTAGGCAAGCTCTCCAAGGTCTGAC 3386319 32 100.0 34 ................................ AAACCAAATGCTTATGTAGGTTTCCGTGTAGGGA 3386385 32 81.2 0 .T........................AA.TCT | ========== ====== ====== ====== ================================ ==================================== ================== 6 32 93.8 35 AGGGTTTAATTGTACCTTAGTGGTATTTAAAG # Left flank : ACGCATTTTTTTTCATTTCTATGTGGTTTAATTGTACCTTAGTGGTATTTAAAGTTAGCTTAGATATAAGTACAATCTTGTGTTGTTCGGTTTAATTGTACCTTAGTGGTATTTAAAGGCGGCAACCGGTCGGGGCGAACTTTAAATATAAATCGGTTTAATTGTACCTTAGTGGTATTTAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : TTTTTCTAACTTTTTCTAACAGCGAAACCATCTGTTAATCAAAGACAATTCTCTCTTCAAAGGGAGGAGCCATCCTTTAATGCCACAAAAAAAGCAATAAATTCATAGGCCAGACCAAATATATGACTATATTTGGGAGAAACTTAGTATACTATTAACTTACTTAGATTATATCTATACCTTATATAATATATAACCTAAATATAATACCAGAATTACTATATGAGAATACATTTATCAACGAGCGCCAACAACGAACTCGTACCTTTCAATTACCAGCAGAAACTTCTTGGTGTATTGCATCGCTGGCTCGGAACAAACGAACTACATGATAAAATATCCTTATACTCCTTCTCATGGTTAAAGGGAGGAAAAAGATACAAAAATGGACTTCATTTTCCTTATGGAGCCAATTGGTTTATCTCTTTTTGTGAGGAGAATTATGTCAAGACCATAATAAATGCAATCATGGACTCACCAGATATGTTTTGCGGAATGAA # Questionable array : NO Score: 2.95 # Score Detail : 1:0, 2:0, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGGGTTTAATTGTACCTTAGTGGTATTTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.75%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [6-6] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 3 4300256-4300423 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ033902.1 Parabacteroides sp. HGS0025 aczIs-supercont1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ================================= ================== 4300256 35 97.1 30 .................................T. AAATTGACAGAGTTCGTGACAGACTCTGGT 4300321 35 100.0 33 ................................... ATCAAAGCCTGTATTACTTTCGTCTACCTGACT 4300389 35 97.1 0 ................................C.. | ========== ====== ====== ====== =================================== ================================= ================== 3 35 98.1 32 GTCGCATCCTTTACGGGTGCGTGGGTTGAAACAAT # Left flank : TTCCAGGTCACGCCGCCCGAAAGCCTGCGAAGTCATACCACTCGTCCCCATCCGCAGGAATCCGAACAGCCAGTAAATGATATTAAACAACATTCCCCCTACCGCGATCGCCCCGATATAAGCCGCCGATCCTAAATGACCGACAATAGCGACATCAATCAGCCCCAATAAAGGCACGGTTATATTTGAAACAATAGAAGGAATTGCTAATTGAAGTATTTTTTTGTTCATGTTATCGTATATACCAAAAGCTTATTCTTAAATTTGTAAGCAAAGTTACGGATTACTTTATATATAAACATTATAACGCAACAATGTTTCAATAACAGATAAAACGCGAACCTAGAGTGGTTGTAAAAACACAGGATGTTCGCACTCCCTGTTATTCTGATATTTACAATATTATTAATAACTATACAAATACCAATTATTTGTACACTTTATTATTCGCAAAATTATATGCTGAAAATGTTATCAATAAAGCTTTCCACAAACATGCA # Right flank : TCAACTTTTTTTGCTTTTCCCGATCTACTGTGTCGCATCCTTTACGGGTTCGACACGTCCCTTTCTCAGAGCGTTCAAATCATCATCGTTTCAACCCACTTAGGGAGCTCGTTTCATGACCAAGAACTGCTATACAAAAGTATAATCATAAACAAAATACAAACGACCACAACAAAAAAATATCATTATTTATCAATAGACTGTTCTTATGTTATTTACCTATTCTAAATCAAATTTATTTGCCTTCCTTTGTAAATTAAAGCATGAAAGCTTAGTTCATTAAAAAATAAAATATAACTTTGTGAAATAGGAATAACAGAGAAAGTATATTTCTCAAAGTGTGGACACCTATATTATTATTCACAATTTGTTAACCTAAACTTATGGTATACACGAATAAAGAATATTGTCTTGAGGTTAAAGGAAGCATGGCCTGTTTCACTAGGCCTGAAATGAAAGTCGAAAGAGTCAGCTATGATGTAATAACTCCTTCTGCTGCA # Questionable array : NO Score: 2.57 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCATCCTTTACGGGTGCGTGGGTTGAAACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.70,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA // Array 4 4364093-4363872 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ033902.1 Parabacteroides sp. HGS0025 aczIs-supercont1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 4364092 29 100.0 34 ............................. TTGTTGATATACGGTTGATTACGCCCAATGGTAT 4364029 29 100.0 36 ............................. GAAGAAGGTTTTTCTGTAGATACCATATTGGAAAAA 4363964 29 100.0 35 ............................. TATTCATATGAGCGATTTTAAATCACGCCTGATCG 4363900 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ==================================== ================== 4 29 100.0 35 GTATTAATTGAACTTAGTAGAATAGAAAT # Left flank : CTTTTAAAATGTATTGGTAATGTATGTGATCTTAGTTTATGATTGTGGAGAAAAACGGGTCGCGAAGATGTTAAAACTTTGTCGGCGTTATTTGAACTGGATCCAGAATTCTGTCTTTGAAGGTGAGATATCCGAAGTTCGTCTAAAGGAGTTGATAATGCAGGCAGAAACCTTTATGGATAAGACCTGCGATAGTATCATTATTTTTAAGAATGCTTCAAAAGTGACAATGGATAAGCAGATTGTAGGTAGAGAATGCAGCTCTATTGATATATTCCTGTAACAATAGATATTTGTCGATCCTGTAATTTTTGAAATATACAGTGGTTGAAAATATGAAATAAGCTCTTTGACTTGTTGATTTATAGCTGTTTATGTGATATGTCGATCTCCAGTGTTTTTTATATTATTGGAGGTCGACATATTTTATCAGGAAAAATGGTTGTTTTTAAATTTTGAACTTATTGATATTTATAAGTTTATGTTTTTGGGACGATAAG # Right flank : AGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTATTAATTGAACTTAGTAGA # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTAATTGAACTTAGTAGAATAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [1.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //