Array 1 46-540 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABWPQ010000027.1 Pseudoalteromonas sp. McH1-7 NODE_27_length_78561_cov_30.644539, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 46 32 100.0 34 ................................ AGCTCATCTAGGTGACGTTTCTTAATAATGTCTC 112 32 100.0 34 ................................ TAGTTCCGCCGCTACGGGTGACCAAAAGCAGCAT 178 32 100.0 34 ................................ TGACTACCCATAACATTAATTGCTTCACGAATTG 244 32 100.0 34 ................................ TATGGGGGATGTCATCATTGCGCTGCGTGGATGG 310 32 100.0 35 ................................ AAGTAAAGCCTGGTGCAATCAAACGACACATGCTT 377 32 100.0 34 ................................ TTGCAATCGGCCATCAGCTGCCATTGCAGCAAAC 443 32 100.0 34 ................................ ACTGCAAACGCGACCAGCGATTTAGCCCGTGATG 509 32 93.8 0 ...........................AC... | ========== ====== ====== ====== ================================ =================================== ================== 8 32 99.2 34 GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Left flank : GTGGATTGAAACTCATTTGTCATCAATCCTATATTGCAATGGCTAG # Right flank : CCTCAGTGAGTAATGTGAAATTCAGTGTTTAAGCTGATTGTGTCTTTGTTTGGTAAAGGAGACGTAATGGGTTTTTGATATGTTATCGCGTTCTTATTCAAAAGAGGAGATGGCGGCAGGGCGAGACTCGAACTCACATCATATACTGTGTATAACCGTTACCCATTGGAAACACTGCCGCACTCCTCTACTTTGTCATACTATTTACAAAATAGCTAACACGTTCTTAATTGCTTTTGCAAAGTTCATGACGATTATTGGCTGCTAAAAAGTTAGCTTTTATTTCAAAATTTTATTGTATAGGTGAGGTTGTAATTGTACTTACTGTGATGGTGAAGTGTAGAGTATTTTCCATGTTAGGGGCTGGTATGCTTGTTAACATATTGGCATTTTGCCTCTTCGATAGTGTACTTTTGCAATTTTATCTATGTACTTTATCGTGAGAGACTTGTCTTTATAATTAACTAAATGTAATGTTTGGGTTAAATGTAAAAGGATAG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 1 146887-147643 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABWPQ010000012.1 Pseudoalteromonas sp. McH1-7 NODE_12_length_147688_cov_31.510267, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 146887 32 100.0 34 ................................ CCCTCTCGTCCAGAGAGGCCTGTGCTTACGCTAC 146953 32 100.0 34 ................................ TTCTTTGTAATCAACAATAGTGGATATTGCTGAT 147019 32 100.0 35 ................................ AAAATAATCAGGCTGAGCATCTGAGTAATAACTAA 147086 32 100.0 34 ................................ TAAAATAACACCTGAGCCAGATGCTTGGTATCAA 147152 32 100.0 35 ................................ GGCTTCTTCTAAGTGCTGGATCTGTTGTTTAAGCC 147219 32 100.0 33 ................................ GTCTACCCAAGCCAATATCAGATAAAATGCACG 147284 32 100.0 34 ................................ CAAATTGTCTTTGGGACTTCCTGACTGCGCTGAA 147350 32 100.0 33 ................................ TAGGAATGGCCGGGTTACACAGTTTTCACAGGC 147415 32 100.0 35 ................................ CCACCAAAAAACAAACTCCACCTATGTTTTCTGAA 147482 32 100.0 33 ................................ TGGTGATTCTGCGCGGAGATGAGGCCACTAAAG 147547 32 100.0 33 ................................ TCATTTGTCATCAATCCTATATTGCAATGGCTA 147612 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 12 32 100.0 34 GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Left flank : TTTGTGATTAAAAAATAAGGATTATGAACCATGATGGTATTAGTCACTTACGATGTCTCGTTTACTAGTGAAGATGGGCAAAAACGCCTTAGGCAATTAGCAAAAGTATGTTTAGATTATGGCGTTCGGGTGCAATACTCTGTATTTGAGTGTGAAATAGATGCAACGCAATGGCTTATTTTTAAAAATAAGCTTTTATCTATCTATGACCCTGAAGTCGATAGCCTGCGTTTTTATAAACTCGGCAAAAATTGGCATAACAAAGTTGAGCATCATGGTGCTAAAGTTGCGTTAGATATTTTTCGTGACCCATTAATTTTGTAATCGCTAGGGCTTGGTTCTCATGAAATCCCTGTGGTTCTAGCGATTTTATAAGCTCTTTAAAAATATAAGAAAAATTTTATTCTTGGTGATTAGCACTAAGGATATTGATACATTTGCTCATGGCTAGCGGAAACCTCTACACCATGATAGTGTATTTGTGCCTTTGAGAGAAGGCA # Right flank : TCATTTGTCATCAATCCTATATTGCAATGGCTAGTCGCGCCTCCC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA // Array 1 36685-38425 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABWPQ010000031.1 Pseudoalteromonas sp. McH1-7 NODE_31_length_69277_cov_32.961561, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 36685 32 100.0 34 ................................ ATTACTAAAAGTGTTGGTGCATATAGAGCAAACA 36751 32 100.0 33 ................................ TTGTTCGCCACAACCTCTAGCTGCATCTTGAGC 36816 32 100.0 33 ................................ TGCAATTGTGTCTATTGCTTGCTGATCTGCTTC 36881 32 100.0 34 ................................ AGAATATACAGCTTTGAAACTGCTTTTAGTGGGG 36947 32 100.0 34 ................................ TTTGTCCGTTATTAAATAGATTTTCATCGGGTAA 37013 32 100.0 34 ................................ TCAGTCCAAAAGCAAAAGCGTAAAGAGCAAGGCA 37079 32 100.0 34 ................................ TCAATCGATGTAAGAGGCGCTGAAAGTCCGAACA 37145 32 100.0 34 ................................ ATTTAAGATATGTCCAGAGCCGCTACTATCTAAT 37211 32 100.0 33 ................................ GGCCTATTAATTTGCCATTGGTAGTGTTGACGA 37276 32 100.0 34 ................................ AATTGCGTCTATATGTGATTGGTTTAGCGTATTC 37342 32 100.0 34 ................................ AAAGCGCCCTACTCAATGAGGACGCAACACTATT 37408 32 100.0 35 ................................ TACTTTGCGCTTGGCATCATAGCTAGTTAACGTAA 37475 32 100.0 33 ................................ AACTCTTCCTTGAATGTGTCTTTAATCCATTTC 37540 32 100.0 33 ................................ TGGTGCGCGGGCTGCTATGACTTCGCTGGCAAG 37605 32 100.0 33 ................................ CTAGTGTGGTTAGCATATCTTTGCCTCCAATTG 37670 32 100.0 33 ................................ ATGTCCATACAGGACACTAGAATAAATACAAAG 37735 32 100.0 33 ................................ ATCAGATACAAAGCGCCTAAAACAACTAGACCA 37800 32 100.0 34 ................................ ATGGCAGTATTATTGAGTTGAGTTAACGCCTCAT 37866 32 100.0 33 ................................ CAGTTCCTGGCGAACCAGTGCCGCAATAGCTTG 37931 32 96.9 34 ..............T................. AACATAAACCAGTAGTTGTCTTACGGGATAACAA 37997 32 100.0 35 ................................ AGGCGCAAAAATCAACCTGAAGCATCAAAACTTTT 38064 32 100.0 35 ................................ CATTCTTACCACCTGTCACCGGGCCAATTGTCACA 38131 32 100.0 34 ................................ TGATCCGCGCACTATAGGTGTTTTTGAGAAATAT 38197 32 100.0 33 ................................ TGCTGATACCATCAACTAATAGAGTTTGATTTT 38262 32 93.8 34 ...A..C......................... GAAATCCAATCTAAACAGCGCGTTTTCTATGCGA 38328 32 96.9 33 ......C......................... CACGCCACGGAAAATCGACCAGTGCAATGTAGG 38393 31 75.0 0 ......C.............A...-..ATTTT | AA [38415] ========== ====== ====== ====== ================================ =================================== ================== 27 32 98.6 34 GTCGCGTCTCCCGCAGGCGCGTGGATTGAAAC # Left flank : GCGTGTGCTTGAAGTAACACAGCAAGACCTAGATTGGCAGCAAAAGCTGCACACGTTTCAAGCGCAAAAACAAACCATTTTAGCCGAGTATGGTAATACCCCAATGGCAACAGAGCAGATTGAAGCCCTATTAATAAAGAGTTTTACTGAAAATGAACGCAAGCGAGTGGCCGTATTGACCAAATGATCCATGCTGATAGGCACAAAGCGTGTTGTAGCGTGCGTTGTTAGCTGTACTGACAAATTATTGCTGTATATAAGTCGCGATTGACAGGGGTTAAGTTTTTTACATAGTGTATGGTATAAAATATGAAGTCGATTAAATCGCTAGGGCAGCGTACTCATCAAAACCCCAGGGATCTAGCGATTTTATAAGTTATTTAAAAATATGGAAAAATTCCTTTTTTGCGCCAGTTAAACGGGCCTTATACCCCATTTAATTGACAGTTAGCGGAAAACAGCAATCCGTGCTAGGGTTGTTGTGCCTTGAAAGCAAGGCA # Right flank : TCATTTGAGAGCTAGCATAATAAAGGAATAAAGCTTTAAACTTTTTGCCTAAGTCACATATCAAGATAAGGTGTAATACCAATTTGACTTAATACTTGCTAAATTTGAAGGAGTAAATCTGACGCTAACAGCGTTAAAAATTTCTCATTTAGAACAACTAAATAGCAAAATTTTTGCCTTGCCTACAGGACGTAGGTACCTCGGCGTGAGCAGGACGCGGAAGCGGTGTTATCGACAAGATTTTCTCGCCTCAAAATAGACCACTTAATTAAGCAAATTGGTATAACAAATGAGAATTGAACCAGATTTATGGCAACTATACTTGGATGTGTATTTTAGACCAACACGGCCACTGCGCTTTGAAGCTTCAGGGGCGATTATCAGCCTCTGGAATCCTAGCGGTGAGATACAAAGTGCAACTAAGAATGAGCGGCTTTCACGATTTTGGCAAGGGGCTTTACAGCGTGCCAATAGGCCTTATCAATTGCTTTGGGGCGGTG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGTCTCCCGCAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : NA //