Array 1 1035069-1034321 **** Predicted by CRISPRDetect 2.4 *** >NZ_QYYB01000001.1 Pseudomonas sp. KB-10 KB-10_1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1035068 28 100.0 32 ............................ TTTGTTGTCAACCGAAAAAGGTTGACAATAGA 1035008 28 100.0 32 ............................ TTGCATCGGCAAAGTTGTTCGCGCGCTCCGTG 1034948 28 100.0 32 ............................ TGCAGGTCATCTTGGGAAAGCGGCATGTTTTC 1034888 28 100.0 32 ............................ AGGAAGAAGTGGACGCCGCGCGCAAGGCCAAG 1034828 28 100.0 32 ............................ GGCATGATGCAGCGCTTTGAGCGGATCGCCTG 1034768 28 100.0 32 ............................ CAGGCAAAACAGCGAAGGCCTGCGCCATGGTG 1034708 28 100.0 32 ............................ AATCTGGTAGTCACTCGGCAGGCGAAACTGCA 1034648 28 100.0 32 ............................ TCGCGCACGGCCGGCAGCCGGTCTACCCGCAC 1034588 28 100.0 32 ............................ ATTGCCGCCGTTGTAGCCGGACAGCACGAAGG 1034528 28 100.0 32 ............................ GTGCCCAGCTCACGATCCGCCGTGAACGAGGT 1034468 28 100.0 33 ............................ AAGCCCCCGAATCAGGCTGGCCGCCGGTATACC 1034407 28 100.0 32 ............................ CGACATCGACGCCGACCACCTGCGCGAGCGTC 1034347 27 82.1 0 .............C.......C.-..GC | ========== ====== ====== ====== ============================ ================================= ================== 13 28 98.6 32 CTTCACTGCCGTGTAGGCAGCTCAGAAA # Left flank : CGAGGCACTAGACCGGTTGTTGGCGCTGAACTGGCTGAGCGGCATGCGCGACCACCTGCATCTGGGCGAACTGACGCCGATTCCCGCGCAGGTGCGCTGGAGCTGCGTCAGCCGCGTGCAGGTGGACAGCAACCCGGAGCGCGCCCGCCGCCGCCTGATCAAGCGTCACGGCATCAGCGAGCAAGAGGCGCGCCAGCGCATCCCCGACAGCGCCAGCAAAGCTGCAACCTGCCCTATGTCACCTTGCGCAGCAACGGCAGCGGTCACAGCTTCCGCCTGTTTATCCGCCACGGTCCGCTGCTCGACAATCCCACCCCCGGCACCTTCGGCGCCTACGGCCTGAGCGCCCAGGCCAGCATCCCCTGGTTCTGACCCTTTTTCCCACTCCCAAGCGGAGCCCTTGCAAAATCAAACACTTGCAAGCGGCTCCGAAAAAGGGTTTTCAACCACAAAATAGAAAGGCTCTTTAACAATCAATACGTTAGGGTTCCGGGGCTCTA # Right flank : CTCACACACCCAGCGCGCGATACATCACATAGCAATCCACCAACCCATGCCTGGCGTGACGGTAGGCCTTGGGCAAGGTGCCGACTATCTCGAAACCGTGCTTCTGCCATAGCGCCACGGCCACCGTGTTGGTGGCCACCACGCTGTTGAACTGCATGGCGCTGAAACCCAGCTCGCGCGCCACGCTCAGCGAATGGGCGCAGAGTCGGCCGGCGACGCCACGCCCGCGTGCAGCCGGGGCGGTCATATAGCCGCAGTTGCACACGTGATCGCCAGGGCCGGCGGCATTGGCCTTGATGTAGTAGGTGCCGAGAATCTGCCCGTCCTGTTCCGCGACGAAGGTGGCGCGCGGCAGTTCGACCCAGAGTTTCCAGGCCGTGTCGCGATCCATGTCGGGATCGAAGGCGTAGGTTTCCTGCGCCTGCACCACGTCACGGATGATCGGCCAGACCTGATCGAAATCGGCGGCCTCGATGGGGCGGATGATCAGTTCGCCACTC # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGTGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1045657-1046644 **** Predicted by CRISPRDetect 2.4 *** >NZ_QYYB01000001.1 Pseudomonas sp. KB-10 KB-10_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1045657 28 100.0 32 ............................ AGGCTGTGCAACGCGCGATCGAGGGCGGTACG 1045717 28 100.0 32 ............................ AACAGCGCATCGCGCCAGATGGGGCGAGGCGG 1045777 28 100.0 32 ............................ TTGGGCGTCGATGGCTGGCTCGGGTTATGTCT 1045837 28 100.0 32 ............................ TGGCGCCACATTGGTTTGCTTGTGGCCTCCTC 1045897 28 100.0 32 ............................ AGGGAGAACAGCGAACGCCTCAGCCATAGTGT 1045957 28 100.0 32 ............................ GGGCAGTATCGCTGCCGCGGTGTTGGCTCTTA 1046017 28 100.0 32 ............................ GTGGGGCAAGGCGCGGGTGCTCGATGGGCGAC 1046077 28 100.0 32 ............................ TGACCTTGGGCGCCTTCTGCGCCGCTCCGGCC 1046137 28 100.0 32 ............................ AAACGGAACGCGAAAACTCAGCGCATCGACTA 1046197 28 100.0 32 ............................ AGACTCTGAATATTCCTCACGGCCCTGGAGGT 1046257 28 100.0 32 ............................ CTCAGGGAATTTCCCTGGAGGATGCACAACAG 1046317 28 100.0 32 ............................ CGAATGTGCTCGCCTTCCTCGATATGCTGGCG 1046377 28 100.0 32 ............................ TCGCGCAGCTCGGCCACCGGCCGGCGCAGATC 1046437 28 100.0 32 ............................ ATCAACCGCGCGCTACGCAGCTACAAGCTGCA 1046497 28 100.0 32 ............................ ACATCGTTTTCGACCCTGATACCGGACTGAAA 1046557 28 100.0 32 ............................ ACGCGTGCACCCCAGTTCACTGAGAGTCTGCA 1046617 28 96.4 0 .........................C.. | ========== ====== ====== ====== ============================ ================================ ================== 17 28 99.8 32 CTTCACTGCCGAATAGGCAGCTCAGAAA # Left flank : CGGTGAGAACCAGGCGACTTCCACATCCATCTCATTGGCCGAGAACAGTGGCGTGCCGCCACCGCCACAGAAACCCACCAGCACGCCAGCCTTGGCCAGCTCACGCATCGCCGCCTGGGTGATCGAAGTGCCGGTGCCGAGCAGGATAGTGGTGGTGTTGGCGATGGGAATGTTCCAGTACAACGACTGCTTGCCGGCATCGGTGACGTACTCCACCCGCCCACCGTTGACCAGCACTCGGCAGTGCTGCAGGTAATAGAGGTTGGCGCGTTTGGAATGGAGGATGGTCTTTAGGTCGGAGGGGCTGATGTCGTCCATGATGACTCCCGTTGGCATCATGGCGGTTTACCATCTTTGCCCGAGCTTGCCGACCCTCTTTTTGCGGGCCATTCAGATGCCTTTATAAATCAAAGGGTTAGTAGAGCAGCGCAGAAAAGGGTATTTGCCGCGTTAGCGCCTGCAGGCCTGGCCAGGCAAGGGATTGGCGAGTAATGTCTCTA # Right flank : ATTTCGCCGCGGTGTTTTTGCCGGCGTGCCCGCTTGTGAATCGGGTGACAGCGACATGCCCGGCTTTGGCACGGTCCGCGCTCGGGATGGCGCGGCGTTGGGTGGCGCCGGCAATTGCCTTATGCTGTGTGCCCCCCGAACTGCCGAAGCCTGAAGCCTCATGCATCACTCCACCATCCTATTCGACCTCGACGGCACCCTCACCGACCCGCGTGAGGGCATCACCCGTTCGGTGCAGTACGCCCTGGCCAAGTTGGGGATCGATGAGCCGGATCTGACCGCGCTGGAGCACTTCATCGGCCCGCCCTTGCTGCAGTGCTTCATGGCGACCTATGCGCTGGACGAGGCCACCGGCTGGCAGGCGGTCAATCATTACCGCGAGCGCTTCCGGGTCACCGGCCTCTACGAGAATCGCGTGTTCGAGGGTGTCGAGGCGCTGCTCGAAGCATTGGTGGCGCAGGGGCGTACGCTGTATATCGCCACCAGCAAACCGACGGTAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGAATAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACTGCCGAATAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //