Array 1 479330-485794 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017019.1 Moorella thermoacetica strain DSM 103132 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 479330 30 100.0 35 .............................. AATACCTGGGGCAAGACGTGGGGGGACTTAAATAC 479395 30 100.0 36 .............................. TCCCGCTGATGGGCATTATCCTGGGTGGGTATTTCG 479461 30 100.0 36 .............................. CTAGACGCATGGCGGAAGAAGGGAAGACAGTAGAAG 479527 30 100.0 37 .............................. CCGCCATATAGTGCTGACACTGTAAGACGTACTCATC 479594 30 100.0 35 .............................. TCGACCTGCCGGAAGGCTCCTGGCGCGGTGGCCAT 479659 30 100.0 36 .............................. ACGTCCACCGGCACGGCCCCGCTGGCCACGTTTTTC 479725 30 100.0 36 .............................. CGGTGCATTTTCCCCGGCCTTGGGAAAGGCGGGACC 479791 30 100.0 36 .............................. CAGGCCCGCTGGGAGCCTATCTCGGCAAAAAAACAA 479857 30 100.0 36 .............................. GCATTTCATTTATCCGCATACCGCTATAGATCAAAA 479923 30 100.0 36 .............................. AGATAACAGGTAATGGCTCACCATCCAGGCATTGCG 479989 30 100.0 37 .............................. TAAACTACCTGGGCGTAAATATCCCTGGCACCAGCGA 480056 30 100.0 36 .............................. TGCTGCCATCTTCTGCCGGCTCTTTTTCTCCGCCTT 480122 30 100.0 35 .............................. CCGCTTCCATATCTCCTACGGCGTACCACTCCAGA 480187 30 100.0 35 .............................. CTGGCGCCCAGGAGGCCGTCATTTTGTACCTCAAC 480252 30 100.0 36 .............................. TAAATTTGCCCCTAGCTTCGCGGTCGCCGGGGTAAA 480318 30 100.0 35 .............................. AGTAATTCTACGCCCTTATTCATTATTAAACTCCT 480383 30 100.0 37 .............................. TCAAATCGTTGACGCGCAGATGGCCGCCAGAAAAGAA 480450 30 100.0 36 .............................. TCTCAATAATTTGTTTATGTCACATCCTAAACATTA 480516 30 100.0 34 .............................. ACAGTAACTTTCCCTGTGGAGGGGTCGAACTCTA 480580 30 100.0 35 .............................. TACCAATTCACCCACAGGTTGTAGATTTACTACGG 480645 30 100.0 36 .............................. TATTCCTACATATTCCAGTGCTTCTTCAGCATTCAT 480711 30 100.0 37 .............................. ACACATTTTGTGATAAAAACATATCACATACATATAT 480778 30 100.0 37 .............................. TAGAGAATATCCAACACCGCCCGGTGGTCCACCTGCT 480845 30 100.0 38 .............................. AGCGGCTCCCCTTTCGGGGAGGTACGGGCTTGCACCGT 480913 30 100.0 39 .............................. GAAGTGACGCCACAACTGGCGCAAATGAGGTTGAATATT 480982 30 100.0 36 .............................. CACCTTTAACCTTGAAACTTTTAGCGTTTTCCTCCA 481048 30 100.0 37 .............................. ATCTTCTGCGGCACGTTTGCAGCCGTCGCTCCATAAC 481115 30 100.0 37 .............................. AAAAGGAAATTGGCATTTGGAGCAGGCGACAGAACAA 481182 30 100.0 36 .............................. TACACAAATACAACTTCCTGGGTGGTATTGTAGGGT 481248 30 100.0 37 .............................. TCTGCTCTAAGCGAACGTTTTTTGTTTTTGCGATTAA 481315 30 100.0 38 .............................. GTATATCACGTTGCTACGTTGTTGTCAATGCATTTTCG 481383 30 100.0 37 .............................. TAAATATCTTCGGCGATTTGTAATTCCCCCGACGGCA 481450 30 100.0 35 .............................. TATGCCGCGTGGAATATATTGGCAGGATGGTGGTA 481515 30 100.0 35 .............................. TCGCTTGCGATGACGATTTCCTCATAGCTCCCGTT 481580 30 100.0 35 .............................. CACTCTGGTATAACCTCGATAAGCCGCTGCGCGGC 481645 30 100.0 38 .............................. CCATTTTGGAGACACTGTTAACTTAACCAAACTAAGAA 481713 30 100.0 35 .............................. AAGCATCTTTATTGCCTGTCGCCTTCCAACAAAAA 481778 30 100.0 36 .............................. TCTTTGTAATGTCGCCGATGTCCAGCTCACTCGATG 481844 30 100.0 39 .............................. TTCCCATCCTGGCCGGCCTGGCGGTAGAGTACCTCCGGC 481913 30 100.0 37 .............................. AAGGCGTATAAGTACAGCTCCAAGACCGTACTAGTGC 481980 30 100.0 37 .............................. CCGGCCTCACAGCGGCCTGGTATGAGAAAAAACTTGA 482047 30 100.0 36 .............................. GAATATTATAAAGCGGCTTTGCGCCTGTAATATGCG 482113 30 100.0 38 .............................. AATGCACGCGGGCACGCAGCTTTTGCTTCCTCTTCGGA 482181 30 100.0 38 .............................. TTGTAACGGAACCACTCGTAGGCGCACTTGGTGCTCTG 482249 30 100.0 36 .............................. CTGTTCAACCGCAGTATTTGTTTTTTCGCTCATCTA 482315 30 100.0 36 .............................. AATGCACGCGGGCACGCAGCTTTTGCTTCCTCTTCG 482381 30 100.0 36 .............................. CAAGCTCGGAGTGAGCCTGCGAATACCATTCCGGCC 482447 30 100.0 35 .............................. GATGCAAGCCGCCCATTCAAAGGCGGCTTCTCCTA 482512 30 100.0 36 .............................. ATTTAAGCTATATACCAGTAGAATTATGGGAACAAA 482578 30 100.0 35 .............................. CCCGATACCACGGCAGCTAATGATCTGCGTATCAG 482643 30 100.0 36 .............................. ACGTAGATAAGGAGCTATACTGGAAGATTGTCGCCT 482709 30 100.0 37 .............................. GATGCAAGCCCATTCAAAGGCGGCTTCTCCTACCTCT 482776 30 100.0 38 .............................. TAATTTTCTCCCCTTCAAAGGGGATATAAATTTTTTGG 482844 30 100.0 36 .............................. AGAAAACAAGGAAAGTCTTTTCGAGAAATCGCTGAA 482910 30 100.0 36 .............................. GTGATCTCGTCCACGGTCATATAGAGGTACTTTTCA 482976 30 100.0 36 .............................. CACATATTTTTACCTCCTATTGCCAATAATTTTATA 483042 30 100.0 37 .............................. GGATTCTTACAATACCGGCTACAACATTAAATAAATA 483109 30 100.0 37 .............................. CTCTGGTTCGCCGTCAGAAGGTTCGTCGTTCCCTCTG 483176 30 100.0 38 .............................. CGGGATAGCGCCCACCGGATAAATCACTGCCGCCAGAG 483244 30 100.0 38 .............................. TAGTCAAGGAGGTGTAAGTATAGAGCAACCTTTGTCTG 483312 30 96.7 36 ...........T.................. ACCTAAATATTCTTCAGGAGTGTAAAATCCTTTTGA 483378 30 100.0 36 .............................. GTATATCACGTTGCTACGTTGTAGTCAATAGACTAC 483444 30 100.0 36 .............................. ATAGTATTTGAAGTTTATCATCATGCTCAAAGCTTA 483510 30 100.0 37 .............................. AAGTTCCTCTAAATAACCTGAGTTCTATAGTATTTTC 483577 30 100.0 36 .............................. ATCCTCCTGCCTAGCGGGATAAACCTCTCATCAGTC 483643 30 100.0 37 .............................. TCAGTAAGATCATTATTAGTAGTGTTGGATTTACCGT 483710 30 100.0 38 .............................. TCTCGTCGCGAACATACGCCGGTTCTCCGGCGCGGATT 483778 30 100.0 36 .............................. ATCGCCATTGAATGGAAGTCTTCTTTCCATCGGCTA 483844 30 100.0 35 .............................. TGGAAGAACGCCTTTCCGCTGATTTTGTCTTAGAG 483909 30 100.0 35 .............................. AAGAAACGATTTTGCAGGGAAAAGGGAAAGGTTGA 483974 30 100.0 35 .............................. TTTTAGCTGTTTATATTGCTTTATCAGCTATTATA 484039 30 100.0 35 .............................. ATTTCAAGTAAAGTATTTTGTAATTCTCCTTTTCT 484104 30 100.0 36 .............................. TTGAGTCCTTGCCATTGTTACATACCTCCATTTTAA 484170 30 100.0 37 .............................. CAAGAAGCTCAGGCGTTGTCAAAAATAGAAAAAGAAA 484237 30 100.0 37 .............................. GCCGGGAGATAACGGCGATTGAGGCCCAGGCCGAGCA 484304 30 100.0 36 .............................. ATGTAATAAGTAAGGTAGTTTCTCTTCCTGGTGAGA 484370 30 100.0 37 .............................. GATATAAGTCCTTTGAAAAATGTAGGTATATCTTTTA 484437 30 100.0 36 .............................. AGAATACCTATCACTACCTACCACCTACCAGATTTC 484503 30 100.0 35 .............................. TACGGTCAGCTTCTTCGTTCCCTAGTTCTCCGCGC 484568 30 100.0 35 .............................. TTAGTATTGATTATCATTTTCAATGAAATTTCGTA 484633 30 100.0 35 .............................. CTTTATCAACCTTAACATATCCTGCATTTTTAAGC 484698 30 100.0 37 .............................. TCAGTGTAGAGCCTTATGGGCAAGCTGAAGTATGGGA 484765 30 100.0 37 .............................. AGATTTCATTTTCTTGCTTCAATTGCTCTACTACCTG 484832 30 100.0 38 .............................. CCGGTTCGCAGGACTTCTTGTTTTGTGGCTTCAATCCA 484900 30 100.0 37 .............................. TCTTCTCCTGATTAATACCAGGAGACTTTTGCGCTTT 484967 30 100.0 36 .............................. GTTGAATAATATTTTCCTTTGAAAAGGTAACTATAA 485033 30 100.0 37 .............................. AAAATAACAACTAAATATCGACTATATTTAAATGGAG 485100 30 100.0 37 .............................. TTCTTCTACGATTTCCCACTTAACTTCGTCTGTTATA 485167 30 100.0 36 .............................. TAATGATTCTCGTTACTCGGGTGCATCGCAGAATAA 485233 30 100.0 37 .............................. TTTTTAAACCTACAGCCACTAAAGCAGTTAGGACATA 485300 30 100.0 38 .............................. TAGCGCAAGATGAACGAATGATAGATAGGCAAATACGC 485368 30 100.0 36 .............................. GAGTGGTGGAGAGAGCAAAAATGGCGACCAGATAAC 485434 30 100.0 35 .............................. TGAAGCTGGTCATCGATTTTCCGCCCGAACTCAAG 485499 30 100.0 35 .............................. TTTTTTTACTCCTTTTTTCTGCCTCTCACTTTCCT 485564 30 100.0 36 .............................. CTTCAAGTAGTAATAGTATAAATAACGTTTTAAGTG 485630 30 100.0 37 .............................. GTGGATGGGTAGTTTATTTATGTGGCGGGCATATTGG 485697 30 100.0 38 .............................. TGTGTTTCTATACAACAACAGTTGGATGGTACTAATAC 485765 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 98 30 100.0 36 GTTTGAAGCCTACCTATGAGGGATGGAAAC # Left flank : TGGGGCTAAAAATAGCCAGGGGTTTGGTATGCTGGAATGTATTTAGTATAGTATAAAGGGACATTTATCCTGGAAATCTGAATGGAAACGCAGGTGTTGCCAGGAAATACTGCTGGAAAATGCTCAAAAGATTTGATCCGCGTTATACCTGCACCAGAGCAATCTGGGAGGCCGATATTCACCACCGCACCCTTAAACGGTGGAAGAAGCGCCTGGAGAACGCGGAGGGGGACTTAAACGCTTTACGGGACCAGTCCCGTCGCCCTACCATATCATGTACAATTTTAGCCCAGAGGTAAAACAGGCGGTCATCAACTAGATAACAATGATATGTTTGGAGTGGGCTTTTTAAAGCTTCTGTCGTCGATAACCAGTAGTGTAAAAATCCCTGAGGATCGACAACAGGAGATTCTAAGAATGAGGCCTTTTTCTTGCCGAGTGGATTGAAGATGATATAATAGTGGGTGAGAAAAAGGTTAATATTTTCAACCACCTAACGG # Right flank : CATGAGAGAGGCCAAGAATTTCAAGCCCAAAAACAAAAGTTTGAAGCCTACCTAGTTCCCCCTGAAAAAGTCCACTTTTTGCATCACATAGGGGAAATGTCATTTCCGGACTGTAGATCGAGTAGAATTCTAACTGTTTCATCCATCTTGTTAAACCATTGTTGCCAACCGGTGTAAATTATAGGTCAAAATTCCATAACCGACCCAGGTGGTGGTACCCTCATATCCCCTGGAAAGGCTACGGCGTAATCCATATTTGCGCTTCAGAAGACTAATAGTAGCCTCCCCTCCAGCGCGCCAGCGTTGGAGACGTTTGAACCAGCTTTGCGATTGATAGGCTTTGCGAGCTTTACTAATTTTACCTTTCCCTGGTAAGCTGACCTGCTTTACCCCAAGTTGATGGCAACCACTTTCGTTTCCTGAACCGCCGAAACCTCTATCGGCAGCGAGGGCACGGGGTGGATGGTTGAAAGTTTTAATATGATCCTCTATTGCGCCAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAAGCCTACCTATGAGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.70,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 487499-489918 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017019.1 Moorella thermoacetica strain DSM 103132 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 487499 30 73.3 35 CAGG.GGAA..................... CAGTTGTTCCAAGCGGCTCCTCAAGAACTTAAACC 487564 30 100.0 37 .............................. AATCGATACTCCAAGAGGAAAACGTAAAAAAACGTTT 487631 30 100.0 36 .............................. CTTTTAGGTTCCCTCATGCTAATCAAAGTTTTCAAG 487697 30 100.0 38 .............................. TAGAATTGAGGTGTTTTTTATGGGAAAAAAGTTATTAG 487765 30 100.0 36 .............................. CAAACCTAGGTGGGCCATCAAAATAAAGATTATATT 487831 30 100.0 36 .............................. ACGGGATAAGTTTGATCTTAAGTGACGGTATACCTT 487897 30 100.0 37 .............................. TAAAGAATTACAGCAAGGTGTCTTTGCGGTCACTGTG 487964 30 100.0 35 .............................. GACCCAGGCTGACGACTTCCCAGGCCAGTTCAAGG 488029 30 100.0 35 .............................. TTCTAAAAAGAGTGCCATCCGTACCACCGACATAA 488094 30 100.0 37 .............................. AGGCTATGTTACATTCTTTTTTATCTATCTCATCTGC 488161 30 100.0 35 .............................. TTCGCATCGATTAGTCATCCCTTTCCCGGCTCCTT 488226 30 100.0 35 .............................. TACTGGGCGAATGATGAAGGCTGGAGAACTATTGA 488291 30 100.0 36 .............................. CTAGGTTAATCCTAGCAGGAAAGAAGGAAGTAAATA 488357 30 100.0 35 .............................. TCTGCAATGTCAGCCAGAGCATTACCGTGCTATCT 488422 30 96.7 38 .................A............ GGGTCTGTCGGGAGTGGCAAAAGCTATCATGCTTTAAG 488490 30 100.0 37 .............................. CAGGTGTCCAAAGATTAGATGCATTTTTAAACCACGG 488557 30 100.0 37 .............................. ACCTGGCTTGTTGTTTCGGTTCTGGAGGTCGCTCCGC 488624 30 100.0 35 .............................. TCTCAGTAAATCCCCCGCCACCCCGGCTGTTCGGC 488689 30 100.0 37 .............................. TAGTCACTGGCCGTGAATATGTCAAGCATAAAATTCA 488756 30 100.0 36 .............................. TAGGTATTTCTTGCAACATATCTAGCGTATTTTTGA 488822 30 100.0 35 .............................. TTTGCCCTTAAGCGGAGGGGGCCTTCCGGCCCGGC 488887 30 100.0 37 .............................. AACATTCTATAGTTTACGCTGTTGAGAGACTTTATAC 488954 30 100.0 36 .............................. CAGCTTGCGTAAGTACCTGCTCGATAGAAAGAGAGC 489020 30 100.0 36 .............................. AAGTGCAACCCATACTTCGACAGGTTTAAACCCCAT 489086 30 100.0 36 .............................. TTTCAATAAGTTGATAGATATGAACTATGTGCAAGG 489152 30 100.0 38 .............................. CTCCAGGCGGGTAATCACCCGGACCTGGAGGTCGTCAA 489220 30 100.0 36 .............................. TTAATCTCGTTATAGAGTTTCCAAGCATTGGGATAA 489286 30 100.0 38 .............................. TGCCTTCGGCGTACATCCTCACAAGGGCCGGCGCCCAC 489354 30 100.0 38 .............................. GCGGGCTTTTCGTAGGAGGGATAAACCCTCTTTGCGTT 489422 30 100.0 37 .............................. GCGGGCTTTTTGTAGGAGGGATAAACCCTCTTTGCGT 489489 30 100.0 35 .............................. GTCGCGACTTGGAACGCCTGTATACCCTCTACCGC 489554 30 100.0 37 .............................. TTGATTTGCCGCATTGAACGCAGGAGTATTTATGTTT 489621 30 100.0 38 .............................. GCGGATATAAATTTCTCTTTTCTGCCGCCTGACTTCTG 489689 30 100.0 36 .............................. TATTGCATAGTATAAAACCTCCTTTTTGTTTGCCCT 489755 30 100.0 38 .............................. ACGTAGCGAATGTATGTCTCATAGTATGCGGGTGAACC 489823 30 100.0 36 .............................. ACGGCGTATTGATGGTTTCCGCTTCAACGCCACCTA 489889 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 37 30 99.2 36 GTTTGAAGCCTACCTATGAGGGATGGAAAC # Left flank : TCAAAGTAGTAGCATGGGGTACCTTTTGGGTTAAGGGAATACGGCAGAAGCGCCGCCACTTAATACTGTCATTTACTTCCTGAACTAAAACTTCATAACCCAGGCCATAACGGTACTTCAGATACATCAGGCGCAGGTAGGTTTCCATAGGGATAGTTGGCCTGCCCAGGCGCGCCTCAAACCGGCTGATGAATGGAGTCATAAACTTATCATCTTCCAGGAGTTCATCCACCCTGGCCAGTTCTGGATTGAGCTGGACCAGGTCAGATGGCAACAGGGCATCCCACAGGGTGAGTTGCGGATCTTTTAGCCTTAACATGAGATCACCCGGCAGGAAAAGGAGGTGGTGTGGCGAATGTTATTCATAGGGAGTTCCTCCTTCTGGGTTTTCTTGTTTGCTCCTACTTACAAGATTCGATCCAGAGGATGGTAACTCCTTCTGTTTTGCTAAAAATCTAGTCGGTTTTCTGAGATGCTAAATCTTTTAGCCCTGAGTTTTT # Right flank : CCAAGGCGCTACCGACTCGGCGATTACATAGCCTCCAGTGTAGATCGTAAAATAGAATTGACCCAGGATCGTCAAATAAAACTGACCCACCTTGTGATAAAATCTCCCCTGAGAGGGGGAGGAAAAAGAGGTGGTCAGCATGTACAAATGGCAGCGCATCAAGGCACTGCACGCTCAAGGGGTCGGCATCAGGCAAATAGCAAGGGATGTTGGGGTGTCCAGGAATACCGTCAGGAAGTACCTTAAAGAAGCCGGCCCTCCCCAGTTTAAAGCCAGGGAGTATACCAAAGAACTGGACAAGTTTCTGGAAGAAATAAAGGTTATGCTTGCCAAAGGATATATCGGCACAAGGATTTACAAAGAACTGAAAGATAAGGGCTATCAAGGCTCCCTGGCCAGCGTCCACCGTTATCTTAGGGCCATCAAGGAAGATGACAGGACCGCTAAATTAGCCACCACCCGGGTGGAAACAGGCCCAGGTAAACAGATGCAGTACGATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAAGCCTACCTATGAGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.70,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 3 492425-492652 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017019.1 Moorella thermoacetica strain DSM 103132 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 492425 30 100.0 36 .............................. TATGAGCACTCAGGATATCGTTGCGGCCAATGCTCT 492491 30 100.0 37 .............................. CAGCCCCCGCATGTCCACTCCTTCACGCCGGAGCAAG 492558 30 100.0 35 .............................. CAAAGAACCAACGAAAACGAAAAAGCCAAACATAT 492623 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 4 30 100.0 36 GTTTGAAGCCTACCTATGAGGGATGGAAAC # Left flank : GCCAAATACCGGGTAGTGTTTATTACGGCTCAGAAACTACTGGAAGAACTACTTTTGAGCGCCAAAGACGGCAGTCTCCTTGACAAGCTATTGGGTTACTCCCGGCTAAACCTTCTAATCATCGACGAACTCGGCTACATGCCTGTAACTAAAGAACAGGCCAATCTTCTCTTCCGCTTGGTCTCCATGCGTTACGAGAAGGAGAGTATTATCCTGACCAGCAACTACAACTTCAACGAATGGGGGGGAGATATTTTCCGACCAGGTGGTAGCCGCGGCCATAATTGACCGGCTTGTGCATCATGCCCGCATTTTCTATATTAACGGCACTAGCTACCGGCTCAAGGGTAAACTGAAAGCAGCCAACGACCGTTAAATCGGCAGCGAGGCTACACCTTCATTCCCTTTGGCGCATGACTTGCAGCTTATTATTTTTGTTCCCCAGTGGGTCAATTTTATTTGCACATAGTGGGTCAATTCTATTGACAATCAACACTCCA # Right flank : CTCACAAATCGTTTTTGCCTACCATTGAACGCGACTTGAAAGATAAAACACCGGAGGAACGCTATCAACTCCGCCAGGTGCGCAGCAAACCCGTGCTGGACGCCTTTTTGGCGTGGCTAAAAACCCAGAAATCCCGGGTGCTGCCCAAAAGCTCCTTTGGTCAGGCGATTAACTACTGCCTGGGCCAGTGGGATAAACTCACCGCCTTTTTACAGGATGGGCGTCTGGAACTCGATAATAACCGCAGCGAACGCTCCATCAAGCCTTTTGTCATCGGCCGCAAGAACTGGTTATTTGCCAACACCCCGCGGGGTGCTAAAGCCAGCGCCATTACCTACAGCATCATAGAAACAGCTAAGGAAAACGGGTTAAATCCCTTCCAGTACCTCATTTACCTCTTTGAAAGACTTCCCAACCTGGACCTCAAGGATAAAGATGCCCTGGATCAACTCCTGCCGTGGTCGGAAACTCTACCTCCTGTTTGCCGGATGAATAATTAA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAAGCCTACCTATGAGGGATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.70,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 4 1932959-1931046 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017019.1 Moorella thermoacetica strain DSM 103132 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 1932958 29 100.0 36 ............................. TTTCTTATTTCCGCACTCCGGGCAAACCGCCCCGTA 1932893 29 100.0 35 ............................. GATAATCTACCAAGTACTGTTCCCCGCCGTCAGTA 1932829 29 100.0 36 ............................. TCTACGCCATGCCAGTCTATAAGAATGACAAGTTTG 1932764 29 100.0 36 ............................. AACAAAAAAGCCGCGACCCCTATACGGGATCGCGGC 1932699 29 100.0 34 ............................. CAGGAACGGGCTAAGGTACTCATTGAGAAGGGCG 1932636 29 100.0 37 ............................. TATGGCCGGCCAGGGAACCAATGTCCAGGTGAGCCAG 1932570 29 100.0 37 ............................. TCCAGTAGGTAGGCCCGTATCCGCATCGGCTGCATAT 1932504 29 100.0 35 ............................. CCGCAACCGCGTGGGCAAGGAGTGCGCCGATATAA 1932440 29 100.0 37 ............................. CCAGCGAGAAAGCAGGAAAACTCAGTTTTACAAGCCA 1932374 29 100.0 34 ............................. CCCTGCGGCAGCCGCCACGGAAAGCCTCAAGTGC 1932311 29 100.0 36 ............................. TCATAACCCCGCAGGATATTGCGAGGGTCAAAAGCG 1932246 29 100.0 34 ............................. TGCCCGGCCGGGGTGGACTGCTGAGAGGGGAGAA 1932183 29 100.0 37 ............................. ATCCGGTTCTTCAGGAAGACAACGAATACTCCAGGAT 1932117 29 100.0 35 ............................. TCAGGGCAAACTACAGGGTGATAGCAGATGAAATT 1932053 29 100.0 36 ............................. TGATACTATCTTAGGTTATCGGTCTACACCATCCGG 1931988 29 100.0 36 ............................. ACCGGAAATAACGCCATCTTACGGGGAGCCAGCCCA 1931923 29 100.0 36 ............................. TATTTATGAACATATAAAGTTTGTGCTATAGGGTCA 1931858 29 100.0 36 ............................. AATTATCATGTATAAAAATCCCCTCCGGCATAAACC 1931793 29 100.0 34 ............................. TAAGCCGATATAAATGCATCCGGGCATAAGCGGT 1931730 29 100.0 35 ............................. TTATCCCCGGTCCGGGAAAGTACAATTTTAAAGCT 1931666 29 100.0 35 ............................. TCGGGTTGAGACCTCAAATCTATAGGAGGACCCAA 1931602 29 100.0 35 ............................. TATGGTGTAGGTCATTTTTGTTGCCTCCTTTTTGT 1931538 29 100.0 37 ............................. AGGATTTCAGCGAAGCATTGCGGGCGCTGACGACATC 1931472 29 100.0 38 ............................. GGGCCTGCCGGGCCGCCTTCGCGTCTTCCAGGGCCTGC 1931405 29 100.0 39 ............................. GACCGGCGTAGTTGGCCTGACTTGGTGGGGCTCTTGCAG 1931337 29 100.0 37 ............................. TGCACCGCCCGCTTCTACGGTTGAAAAGCCTTCTGGT 1931271 29 100.0 36 ............................. CTGAAGCAATCCCAGGTCCTCATCGGCAAAAACTGG 1931206 29 96.6 37 ........T.................... TACCGGGGGCCTTGCTGCGCATAAAAGTCCAACTACG 1931140 29 100.0 37 ............................. GGCAGTTGATCAAAACTATCCACGGCCACCTGGCAGA 1931074 29 96.6 0 ....T........................ | ========== ====== ====== ====== ============================= ======================================= ================== 30 29 99.8 36 GTGACCATCGACCATAGAGGAATTTGAAC # Left flank : AGTGTTTATTACGGCTCAGAAACTACTGGAAGAACTACTTTTGAGCGCCAAAGACGGCAGTCTCCTTGACAAGCTATTGGGTTACTCCCGGCTAAACCTTCTAATCATCGACGAACTCGGCTACATGCCTGTAACTAAAGAACAGGCCAATCTTCTCTTCCGCTTGGTCTCCATGCGTTACGAGAAGGGGAGTATTATCCTGACCAGCAACTACAACTTCAACGAATGGGGGGAGATATTTTCCGACCAGGTGGTAGCCGCGGCCATAATTGACCGGCTTGTGCATCATGCCCGCATTTTCTATATTAACGGCACTAGCTACCGGCTCAAGGGTAAACTGAAAGCAGCCAACGACCGTTAAATCGGCAGCGAGGCTACACCTTCATTCCCTTTGGCGCATGACTTGCAGCTTATTATTTTTGTTCCCCAGTGGGTCAATTTTATTTGCACATAGTGGGTCAATTCTATTGACAATCAACACAGGGGGGCCTTGACTAGCC # Right flank : AGGGTGGAGATAAAAATCTGGTGATAACGTCAAAGGTGGAGTAGTAATCGGGCTGGGTACCCGGTTGCAAGTTTTTCAGCAAGAAATGGTGCGACGTATAACTGGTGATAGCGATATAGACTTAACGTTACCAGGTAAGGGAAAGTGTGCTTACTTCATCATCACTCCAGATACCCATGGCGCCTTTGATTTTCTGGCTTCATTGCTGTTCACCTTTTTATTCGTTCGGTTGGTAGAGGTTGCTGATACCTCTCCCAATGGCCGTTTACCGGTGCAGGTTAGATTTCTTCTGGATGAGTTCGCCAATATCGTAAGTATTCCGGAGTTTGAAAAGAAAATCGCCACCGTCCAGAGCCTAAGACTGAAGACGAACTTAACGATGGCGGAAATCAGGATTACCATGATACTAAGGACCAGAAACCTCTAGAAGAAGGGGCAGAAGAGGTGACGGAAGAAAATATAAAAGAGGGAGATAGGGTTATAGAGATAGAAAACAAAAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGACCATCGACCATAGAGGAATTTGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 5 1935464-1938935 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017019.1 Moorella thermoacetica strain DSM 103132 chromosome, complete genome Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 1935464 29 100.0 36 ............................. GGAGTACATAGTAGTTCGCGAATTTAACTCCTCGAT 1935529 29 100.0 36 ............................. CGCCCCACTACGGCAACTTCCCGGCTGTCGTACCAG 1935594 29 100.0 35 ............................. GCCTGGAGCAGCAGCAGCTAGGTCGCGCCTCGCAG 1935658 29 100.0 36 ............................. TCGCCGATGCAATGCTGGTTAAAATTTTAACCCTCA 1935723 29 100.0 36 ............................. CCGGCGTTCAATGCCCGAGCGAACACTCTTTAACTC 1935788 29 100.0 35 ............................. TAAACATGCCGTAATGGGCATGAGCGACATTGTTT 1935852 29 100.0 36 ............................. TATTACCCCTTAAGGTTTATGCTAAACAGGACACTA 1935917 29 100.0 36 ............................. GGTTAGCGTGTGGGCTGCCACATTCCCAATTGCCCC 1935982 29 100.0 36 ............................. TCTATATCAAGTGGGAAGCACGTCTCACAGACGTTA 1936047 29 100.0 38 ............................. TCAGCTGCCGGAGAAGATAGGATTTGCAATAGGATTTA 1936114 29 100.0 37 ............................. GCTGCATAGAAATCCTTGATAACTACAAAGGGGCTAA 1936180 29 100.0 36 ............................. ATTCGCGGTATGGCATGTTGCATAGAATACCAATAA 1936245 29 100.0 36 ............................. TCAATGGCTTTATCAGCCGGGTTAGTAGCTATGACG 1936310 29 100.0 36 ............................. CGAGGATAAGCCAGCAAGTACAGAAGCCGGATGTCT 1936375 29 100.0 35 ............................. AGGCCGGAAAGGTAGGGTCGGAGTAGATTAGCTCG 1936439 29 100.0 37 ............................. TTATGTAGTAGCTTTGGACAGCAAGGGGACCCTGCAA 1936505 29 100.0 34 ............................. TGCATCTCTAAAAAGCATCCAGACAGCTACAAAA 1936568 29 100.0 36 ............................. TATAATTAACAGGTTGATTGTAAACCACCTGGGGCC 1936633 29 100.0 36 ............................. TAGGTGCCGAAGGCATTGACCGGGCTGTCAGAGCTC 1936698 29 100.0 36 ............................. GTAAGCCCGGCACGATCTTGCCGGCAGGCCATCCCG 1936763 29 100.0 36 ............................. TTATTTACCACCGCCGTTAACCTGTTCAATTTTAGC 1936828 29 100.0 36 ............................. TTAAACAAGCCAATTAAAAGTTTTAAAAGATACTCA 1936893 29 100.0 36 ............................. TTTCATAGACTGATTCCTTCGGCGCCTCGCATCTCA 1936958 29 100.0 36 ............................. GCGTCCGTCAGCCATTTAGCTCACCTCCATTAACTT 1937023 29 100.0 35 ............................. GACAATTTACGGCCCCCGGCATGGGGCCTAAGTTT 1937087 29 100.0 36 ............................. GACTTACCGGCATAATAACGTCGCCCCTGGGGTTAT 1937152 29 100.0 37 ............................. CCTGATACTCTGCGTTTCCACGGGGCTTATCGCCCTG 1937218 29 100.0 37 ............................. CCCCAGGGTATTGCAGCAAACTGATTATACAGTCCTA 1937284 29 100.0 36 ............................. AGATTTTGCGGGACACCAAGGCCCCTGCCATATTGG 1937349 29 100.0 36 ............................. TGCTTTACGCTGCCGCGACGGGGTTATTTGCGATGA 1937414 29 100.0 36 ............................. CCAAATCACGTTTTTCTGCCTTAAGGCGTCTAGCTC 1937479 29 100.0 37 ............................. TCTATGGTGTTTGCATTGACACTGGGTCTTTTGAATA 1937545 29 100.0 36 ............................. CAGCTCCATCCTCGCCCAGGGCGTCCCGCAGATCGA 1937610 29 100.0 36 ............................. CTGCCGCTGGACATGAACAAGGTAGAGCTGCGCTTG 1937675 29 100.0 36 ............................. GTACCACAATGAGCGCTAGCTGTCAAGTGATAGACC 1937740 29 100.0 35 ............................. AAGTCACTGGTACGATACAAGAGAAATTGCCGCAG 1937804 29 100.0 36 ............................. AGTAGCAGATGCGGCAGGCAATCGGTACTTAATATA 1937869 29 100.0 34 ............................. TAGCAGATGCGGCAGGCAATCGGTACTTAATATA 1937932 29 100.0 36 ............................. ATGTAATAGGATTTACCATGTAGGGGTAGATAACTA 1937997 29 100.0 38 ............................. TCTTAATTACGGTATCAAGGCCGCCTATATGGTCCTCA 1938064 29 100.0 36 ............................. TAGGTCGTTAGCAACTAAGCTACCTCCTCTCCAGCG 1938129 29 100.0 35 ............................. GATAGAATGCGGATTGGTAAGCTTCCTCTTACATC 1938193 29 100.0 36 ............................. GTCCTAGAGTTTTAATTAGCTCTTCCTGTACTGCAT 1938258 29 100.0 35 ............................. TGGCGGCAATCGCAACTTTATAAGGAAAACGGCAA 1938322 29 100.0 35 ............................. CGCTCCTGCCAGTGAAGCTGCTCGTTGAAGTAGGT 1938386 29 100.0 36 ............................. AGCAGATTTACAGCGCTGTAGAAGCGCATTATATAT 1938451 29 100.0 37 ............................. CTTTATCGGCGGCGAAGTCGCAGCCCTGGAAGTTTTC 1938517 29 100.0 35 ............................. CCACAAGAACGAGAAAGGCTATTATGCTGTATCTT 1938581 29 100.0 37 ............................. GGCTCCGAGCCGGATGGGAGTACATCAGGCAAGAGTA 1938647 29 100.0 37 ............................. CAGGTAGCAGCGGAATACGCAAAGACGGCAGGCAAAA 1938713 29 100.0 35 ............................. TGTCAGGGCTGCGTGGAAGTGGCTACCGATTTCGG 1938777 29 100.0 37 ............................. TTGCGGACCATTTTGGTGACCTCAACGAAATGATCAA 1938843 29 100.0 35 ............................. CCATCACTACCACCCGGTCACCTGCCTGGAGCCGC 1938907 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 54 29 100.0 36 GTTCAAATTCCTCTATGGTCGATGGTCAC # Left flank : AGGGTCCACACCTTCCAATCGTACTGCATCTGCCAGCCCGGCCCGGTTTCCACCCGGGTGGTAGCTAATTTAGCTGCATTATCTTCTGCCTTTATGGACCTAAGATAACGGTGGACGCTGGCCAGGGAGCCTTGATAGCCCTTATCTTTCAGTTCTTTGTAAATCCTTGTGCCGATATATCCTTTGGCAAGCATAACCTTTATTTCTTCCAGAAACTTGTCCAGTTCTTTGGTATACTCCCTGGCTTTAAACTGGGGAGGGCCGGCTTCTTTAAGGTACTTCCTGACGGTATTCCTGGACACCCCAACATCCCTTGCTATTTGCCTGATGCCGACCCCTTGAGCGTGCAGTGCCTTGATGCGCTGCCATTTGTACATGCTGACCACCTCTTTTTCCTCCCCCTCTCAGGGGAGATTTTATCACAAGGTGGGTCAGTTTTATTTGACGATCCTGGGTCAATTCTATTTTACGATCTACACCCCTGGAACTCGCCGGCAGCA # Right flank : CCGCAGATGAAAGGCTTGTCCCGACAGGGATTTTAGCAATTTTTTAAAAGCCCCTGCGTCAAACCGCCAGTTTGCACTTACACTATAGGAAATTATCTGTAGGGTCGGGGGTGTCAGTCAAGATTTCACGGTTTAGCTTTACTCCATCCCTGAGGCTATAAATGATGACAAAGTCTTTTTTCATGTTAACTATGGCCATTATTTCCTTCTTAAGTAAGGATATTTGCCCTTCGGTAATATCTCCTTCAAAAACGGATTTTTGCACATGAGATAAATATTTACGGCTGGTCTTCATGATCTTTACCAGGCGCCGTTTGCCGTCGTTGTCTTCAGTATTAATATCATAGATCAGGATCACTCTTATATTTACCACCACACCTTCATGGGGGAATATTTTTCTTCACCAAGGAGGTGCTTTATAAGCTTATATAAGTCTAACCGGACAAGACTTTTATAGCGAATATTCCTTTTTAGCTTGCGGTGCAAAATTGTCTTTTCCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAAATTCCTCTATGGTCGATGGTCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [50.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //