Array 1 4963214-4961963 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009922.3 Streptomyces xiamenensis strain MCCC 1A01550 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4963213 29 100.0 32 ............................. GTCGTGCGCGTCGCTCTCTGTCCGACCCCAAA 4963152 29 96.6 32 ............................T GGATATCCAGCCGGGGTCGGTCGCGGACAGCG 4963091 29 96.6 32 ............................C ACGCCGCGATAACGCTCCGCGTCTGCACCGGG 4963030 29 100.0 32 ............................. AGGGTGAGGTCGTCCGATCCGGGTGACAGGTC 4962969 29 96.6 32 ............................C GGACCTCCATGGGGGCTAGGCACCGAACTTTA 4962908 29 100.0 32 ............................. CCCTGCCACAAGACGTGCGCCGAGACGTGGTT 4962847 29 96.6 32 ............................C TCTCCGAGCACCTGGCGGCGGTGCGCCGCCTC 4962786 29 96.6 32 ............................T CGCTCCTCGCCGAACCGCTCCCCCGCCGCTGG 4962725 29 100.0 32 ............................. TGGTCGTTCTCGTACACGACCTGCGCGTCCAG 4962664 29 96.6 32 ............................C GGCTTCCAGATGGGCCCCGGCCTGTGGGGGCA 4962603 29 100.0 32 ............................. TCGGCCCCGTTGCAGCTGCCGCTGTTGTCGCG 4962542 29 93.1 32 ....................A.......C GTGCGTAGCGCGTCGTCCATCGGCTCTCGCTC 4962481 29 100.0 32 ............................. GCCCGCGCGGAGCACTGGCGTGCGGCCCGCAA 4962420 29 100.0 33 ............................. TTCCGTGGTGGCATCGCTATCGCCTATTCCGGC 4962358 29 96.6 32 ............................C AGCGCTGCTGGTGATCACGGCATACCACATCT 4962297 29 100.0 32 ............................. CGGTATCGGTGACGAGCTGCAAACCGTGGTCG 4962236 29 100.0 32 ............................. GTCGGGCACGGTGACCCGACTCTCGCCGGTGG 4962175 29 96.6 33 ....................A........ CCCTGCGGCGCGAGGCGGAGCGGGTGGACCCGA 4962113 29 100.0 32 ............................. AGGTGGCAGATCACCTCCAGCGGCAGCTGGTA 4962052 29 100.0 32 ............................. TACAGGTGCAGGCCACCACGGCGCGTCTGCAC 4961991 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 21 29 98.4 32 GTCGTCCCCGCACCTGCGGGGGTGTTCCG # Left flank : GTACGGTCTCGGCACCCTCGGGCCACATGCGCTGGAAGGCGGGCGTGGCCTTGCCATAGTCGTGCACACCGCAGAGCCAGGAGAAGAACCTCCGCCCCTTCCCCGGCCCGCCCGCGATCTCGTCCAGCACCAGTTGGGTGGACGGTGCCAAAAACCCTCCCCACAGACGCTCGGCCACGGCAGCGGTATCGAGGAGGTGCGAGAGCAGCACGTTTCTCCTGCCCCCGGCCTTCTCGGCCGACTTCCCCCACAGGGCGCCCACCATCTCCTCGATGCCGGGGTTCACCACCCCGCCCCACACATCACTCACCGTGCCACCCCTGGTACAACTAGCAACTCTGCTTGGGTTGCAGACCTTAGAGCAAGGCACTGACAATCGACGGAGATTCCGCTGAACTGGGTCCGCTCCGCCACCGAGCGGGGAACGCCGACAGGAGGGGAACAAAAACGTACCGAATGAAAACCCGCCCCCTGCCCGGCAAACCAGCAGGTCAAGAAGT # Right flank : GACGGGTCGTTCCACTTGCCGATGATCCAGCACGGCCGTCAGGACTGGATTGGAGGGCAAGCAGCGGTCATTGGGCGACCGCTGCTTGGCTTTGGGCCGACATTGGGGGTGCCCGGCGGCCGACGGGCTGTGTCGTTTGTTCAGTGCTGGATCGCGAAGCGTACGAAGGGGGACCAGCCTTGGCGGCTGATCGTGAAGGGCGGGTGGGTGGGGTCCTTGGAGTCCCGTACGTGGATGGCTTGTTCGGTGATGGCGATCTCCACGCAGCTGTCGCCCTCGCTGCCGCTGTAGCTGGACTTGAACCAGGCGAGTCCAGTCGTGCCGCTGCTCATAGCTCTCCTCGCAGTCGCTCCAGCAGGTCCCGGGATGCGCCCGGGCTCAGGGCCTGCGAGCGCAGTGTGTCATAGCGCTGGCAGAGTGCACTCACCTCTTTTGCGTCGGAGATGAGCCTCCCGTTCTTCTGTCCTTCGGAGTATCCGAGCCGGCGGCCCTCCGGGGTT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.97, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCACCTGCGGGGGTGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 4973327-4974207 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP009922.3 Streptomyces xiamenensis strain MCCC 1A01550 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 4973327 28 100.0 33 ............................ CCCCACGGGGTCTCTGGTGTTGGCGCACCTACC 4973388 28 100.0 33 ............................ CCCCACGGGGTCTCTGGTGTTGGCGCACCTACC 4973449 28 100.0 33 ............................ GCGGCGGCCGGCGGCGCGCACGTGCGCACCTGC 4973510 28 100.0 33 ............................ CCGGTGAGCGGCCGGGACGCCGGCTTCCTCTTC 4973571 28 100.0 33 ............................ CACGGGCTGTCCGGCGCCCGCGCGTGGGCGTGG 4973632 28 100.0 33 ............................ CGTCGGCATCGCCACCGGCCCGGCGAACCTGGT 4973693 28 100.0 33 ............................ GACGACGCCGCCCAGCCGGACGGAGCCACGGAC 4973754 28 96.4 33 ..............G............. CCGGCGTGTGGGGCTCGCCTACACGCTGGATCT 4973815 28 100.0 33 ............................ CGAGACCGCCCCCGGCATCACGCTCGCCCGGCT 4973876 28 100.0 33 ............................ CCAGTCGGGGGCGTCGGCGGTGCCCATGTTGCA 4973937 28 100.0 33 ............................ CCGCCCACAGAGGAGATCGACATGGCCCGCAGC 4973998 28 100.0 33 ............................ CGACCAGATGGCCACCCTCATCCAGCTGCTGTC 4974059 28 100.0 33 ............................ GCGCCATGATCGCGGGGTCGAGACCGACCTCAC 4974120 28 100.0 33 ............................ GCACGACGGGGGCCCGATGCCTCCCGAGGCTCC 4974181 27 85.7 0 ..A.G.................C..-.. | ========== ====== ====== ====== ============================ ================================= ================== 15 28 98.8 33 GTGGTCCCCGCACACGCGGGGATGGTCC # Left flank : CCTCCTGCGTCAACTGGGCGGACGGGAGCGGCGCGTTCCCGCGGGACTGCGACACACCGCCGGACGCGGCTCCCCGCACGGCGGACATGGGCGACGAACACATCGCCGTCATCGGCCCCGAGTTCGACGAGCCGGCCGACCCACCGGAGCCCCCACGATGACCGTTATTGTTCTCATCGCCGCCCCGGAGGGGCTGCGGGGCCACCTCACACGCTGGATGGTGGAAGTTGACGCAGGTGTCTTTGTCGGCAACCCGAGCCGACGGGTACGCGATCGCCTGTGGGAACTCCTCGCCACCCGGATCGGCGACGGCCAAGCGGTTCTCGTGGAGCGGGCCAACAACGAGCAGGGCTGGGCTGTCCGAACCGCAGGCCGGGACCGCTGGCGCCCGGTGGACTACGACGGCCTCATCCTCTCCGCCCGCAACCGCCGCTGATCCCACCCGATCCCAACCGAATGAAAACGACCCCTCCCCCCGATAAACCCCCAGCTCAAAAAGG # Right flank : CTGCCCACGCACGGGCTCGGCGCCCAATGACGCCGCGCCCCGTGTCCGAACCACGTGGTGGGTCGGAGGGGGCGCGGGGGCAGTCGGTGGTCAGATGTCGCGGAAGGTTTCGATCTGGGCGCCCACCGAGTTGAGGCGTTCGGCCAAGTCTTCGTAGCCGCGGTTGATGACGTAGACGTTGCGCAGTACCGAGGTGCCCTCGGCCGCCATCATCGCCAGGAGGACGACCACCGCCGGGCGCAGGGCCGGGGGGCACATCATCTCGGCGGCGCGCCAGCGGGTGGTGCCCTCGACCAGGACCCGGTGCGGGTCCAGGAGTTGGAGCCGGCCGCCGAGGCGGTTGAGGTCGGTGAGGTAGATGGCGCGGTTGTCGTAGACCCAGTCGTGGATGAGGGTCGAGCCGTGCGCCGAGGCCGCGATGGCGGCGAAGAACGGGACGTTGTCGATGTTCAGGCCGGGGAACGGCATCGGGTGGATCTTGTCGATGGGCGCCTCCAGCT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCACACGCGGGGATGGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCACACGCGGGGATGGTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //