Array 1 1750593-1751083 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031218.1 Malaciobacter halophilus strain CCUG 53805 chromosome, complete genome Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 1750593 30 100.0 36 .............................. AAGCGACCTTTTAGGGATGCCTTCAATAAAGTTTTA 1750659 30 100.0 36 .............................. CACTTTACTAGCTGTTCCATCAAAAGTTCTGTTTTA 1750725 30 100.0 35 .............................. AGTTATAATACTTTTAATAAGTTATTCTTTGTTTT 1750790 30 93.3 36 A.T........................... AATGTAACAAAAGTAACTGATAGATTATATGTTTTA 1750856 30 100.0 36 .............................. TAATTATGAACATTCAAGAGAATCAACTTTGTTTTA 1750922 30 100.0 36 .............................. TAATTATGAACATTCAAGAGAATCAACTTTGTTTTA 1750988 30 100.0 36 .............................. AACTCAACCATCTAAAACAGAAATATATCAGTTTTA 1751054 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 8 30 99.2 36 TTCCCCCTACAAACGAGGGTATAGTCCAAC # Left flank : ATTATTAAACATATCTTCTTGACGGATAATATGATTATTTTCAATATCATTTTCACTTTGAACAATTAACTTTAACAAATTTAATGAATTTTGCATATTTTCGTAGCTCTTAATATCTTGAATAACTGCTTTTGCCTCACCATTTTGTGTGATAATAACTGATCGTTGATTTTCATTTACATTGTTTATTACATCAGCTGTCTTCGATTTTAAATAGCTAATTGGTTTTATATCTTGACTTAAATGCATAGGTGCAACCTTTTTAAGATATCGTTTTAACACAGTACTATATTTGAATTTAATTTAGTATTAAATGTTTTTTGTTAATAATTATTTTAATATATTTTATAATACTATTATAAATTTTTTACTATTCTGTTATTAAGTTATCGTTATCGCCTGACCCTACTCTCCAATTATATCTCCAATTATAAAATCATTTCTATTCTACTATTAAGTTATCGTTATCACCTGACCCTACTTTTCTACTTTTCTACTTT # Right flank : CCGATATTTTACAAAAGGCTAACCAAAGAGCTTCTTAAATGTTTTACCGCATAAAAAACAGGAAAATATCTATTATATTGAGTATTTTTAGTCCATTTTTTACTTATTATAACCCTTTTTTATTTGTTCTTCTTTTGCTATTGCATTTTTTATTTTTTCCTCATCTTTTGTTTCCCCTATAGCTTCGATAACTTTTTGTTTTAAAAGCTCTATCACTTTGAGTTTATAAATAAGATAATAATCATTTGGAACTAAGCTCTCTTTTTTGTGTATGTCAGCTATTTTACTTTCTTTTTGACTATGTATATTTAAAGACTTTAGATATTGTACTGTTTTCATAGTAAAATCATTGATAGGATTGTAGTGAAGAATCTCTTGCATTTTATGCTCTTTTTGAAGATAGTTTACTATCTCTTCTCTTTGTGCAAATATCTCATTATTTTCAAAAGCTTTTAACATATTTTCAATATTTTGATGGGCAATATCATTTCTAGTTTGTT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCCCCCTACAAACGAGGGTATAGTCCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.30,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 2 2158152-2155655 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP031218.1 Malaciobacter halophilus strain CCUG 53805 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 2158151 30 100.0 35 .............................. CAGAAAAAAAATCTTATTGCAGATATAGAAACATG 2158086 30 100.0 35 .............................. CCTAAAAAGCTTTGCTTAGTATGATCTATATCAAA 2158021 30 100.0 36 .............................. AACTTTTAAATATTTCATCTTCTGAAATTCTTCTTT 2157955 30 100.0 34 .............................. CCTGACTAGGTGTATCTCAAAATTTGAGAACTTT 2157891 30 100.0 36 .............................. GCAGTAATAGCTAGATCAGATCCTAAAGCAGAACTA 2157825 30 100.0 35 .............................. TTATCTATTGATGGGATAGGGTAATTTTTAAAAAT 2157760 30 100.0 34 .............................. TATCTATTACAGAATTCACTTAAATTTAATTCTA 2157696 30 100.0 38 .............................. GTTTAATATTTCTTGTATAAAATCTGTTAATACAAAAT 2157628 30 100.0 36 .............................. TTATCTCCAGTGATTTTAATAATTGCTGCTTTTTGA 2157562 30 100.0 34 .............................. TCTTTAATTAAAGAGTAGGGTGATGGTGAGTTTG 2157498 30 100.0 34 .............................. TTGCATTTAAAGACGCTTTACAAACAGACGCTTT 2157434 30 100.0 34 .............................. TCAGTTGATATTGTAACTGTTTCCATTTTTTGCT 2157370 30 100.0 35 .............................. TCAATAGTCAATAACTTTTTAAACAATAAATCGTC 2157305 30 100.0 35 .............................. GTATAACCATTTGCACCATTTGCACATAGAACTTT 2157240 30 100.0 37 .............................. TTTAAATAGAGAGCCTTTAATTTTTCTTTAAAATCTA 2157173 30 100.0 35 .............................. CTTGCAAAAGAGATTGAAGAACTTGCACCAGTAGT 2157108 30 100.0 35 .............................. CTTGTTATTTCATATTCTATCATTAATTATCCTAA 2157043 30 100.0 35 .............................. ATGGTTTCAGCACATGACGAAAAGTATAAACAAAA 2156978 30 100.0 35 .............................. TCTTTTTTAGGTATTCCTAAATATGTATGTTCGTA 2156913 30 100.0 35 .............................. ATTATAGAAAGTGCATCTAAAGATGTAGATAAAAA 2156848 30 100.0 37 .............................. ACTAACTGATTAACTCCTCTTTGTGTTTGAGGGATTT 2156781 30 100.0 34 .............................. AGAGAAGTTATCTTTGAATTAAGACCACTAATAT 2156717 30 100.0 34 .............................. AATTGAGCTTAACCATAGGCTCAAATTGAGCCTA 2156653 30 100.0 34 .............................. CTTATGATAACAACTGCGAAGCCAATCATCGCAC 2156589 30 100.0 35 .............................. CCCTTATATTTTCCAAACTCAACTTCACTATTACC 2156524 30 100.0 36 .............................. TAATATTCCTTTATAAATTATTTGCTTTTTTTGAAG 2156458 30 100.0 34 .............................. GTATGAAGAAAATATTAGAAGATTAGTATTTACG 2156394 30 100.0 34 .............................. TTTAACATAGCAGCTGGTACACCAAAAATAGTTG 2156330 30 100.0 34 .............................. ACGAATGGAGTACACATTTGCGATTAAGCATATA 2156266 30 100.0 36 .............................. AAAGCAAAGTAGTTACATTTATATCTTAAATCATTC 2156200 30 100.0 35 .............................. GATGTTGAAGCAAAACATTATAATGATGTTTTAAG 2156135 30 100.0 34 .............................. TAGGGTCTAAATTATATTCATCAATAAACTTTTG 2156071 30 100.0 34 .............................. ACTTGTTTGAGGGTTGGAAGTGTTTATTTAGAAT 2156007 30 100.0 36 .............................. GTTGTTTATGGTGCTAAAAGGATAGCTGATTTTATT 2155941 29 96.7 34 ........-..................... TCAATAAATTCTACATCAATTTGATAATCACTTG 2155878 30 100.0 35 .............................. TTCAGATGAAATGAAAAATCACTACAAATCAAAAG 2155813 30 100.0 36 .............................. AAGCTTTTTTGCATTACTGCACACCTCAAACACAAT 2155747 30 100.0 34 .............................. TTGGATAGAATCAGCAAGAACTGTATTTGTTTTC 2155683 29 86.7 0 T..A....................A-.... | ========== ====== ====== ====== ============================== ====================================== ================== 39 30 99.6 35 CTTGAACCAAAACATATAATGTATTGAAAT # Left flank : AAAATATAAGGGCTATTTATGGCAAGTAAGAAACAAAATTTTAATTATAATTATATCTTTTTATTTTATGATATTGCAGATGAATTTAGTGAATCGGGAAAGTATAGAGTTGCAAAGGTTTTTAAAATTTGTAAACAATACTTAAAACATCATCAAAAATCTATTTTTAGAGGAAGTATTACTCCTTCGAATCAAATAATGCTTGAAAATAAACTGAAAAAAGTAATAGATAAAGACTTAGATTTTATTTCCATAATTAAAGTACAAAACTCAGGAAGTTTTGCAGAAGTTACACTTGGTACAAATAAAAAAGAATCTGAATCAATTTTTATATAATTTTCCAACCTATTTAAAAATAATATCATTTAAAAATAGCTATAATATCGAACTTTTCAAGAGTTCTTTGACAACTTATTGTTTTTATGATAATTGGTTGGAAAAACTTTAAAGAAAATCCTTTTTATGGGAAAGATGATTTTATAAAGAGCGATTTTATCTTC # Right flank : GAATCTAATAAAATTAGGATTCTTAAATATAAGATTTATAAGAATTGATTTCAATCCTTTTTTATTACTGATTAGATTTTAAAAGTAAGTTAATAAAAACTTATAATACCTTTACTTAAATAGATTAAAAAAACTTTTACTTATAATACGCAAAAATTATGTATTCAAGGTAAGTAATGATTAAAAAAATTGATATGAATTCAAACGAGTTTGAAACAGAATTTGAACTAACAAAACAGTTTACTGATAAAGTTTTAGATAGATTTGGTTTCGTATATAATCCAGAAAATGATGTAAATGAATCAGTTCAGCAAGGACTAACAAGAAATAAACTAATTTATGGAAAAAGATTTTGTCCATGTTTTATGGTAAAAGGTCAAACAAAAGAGGAACAAAAAAAAGCAGACAATAGATTATGTCCTTGTAAACCTGCATTAGAAGTTGAAATTCCAAGAGATGGAAAGTGTCACTGTGGTATTTTTTGTACTCCTGAATTTGCT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGAACCAAAACATATAATGTATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //