Array 1 1438371-1441506 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP027400.1 Streptobacillus moniliformis strain FDAARGOS_310 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1438371 36 100.0 30 .................................... AGATGACAATAAACGGGACTATGACGCAGA 1438437 36 100.0 30 .................................... GTAAAGGTATGTTTGTGACGTTAACATATA 1438503 36 100.0 30 .................................... AAAAATCGAAGGAAAAACAATAAAAATTAA 1438569 36 100.0 30 .................................... TACCTGGTTGCGCTGTCGCGCCGCCTAAAC 1438635 36 100.0 30 .................................... AATGGTCTTTGAGGCTGGAGCATGAGCTGA 1438701 36 100.0 30 .................................... AGATGACAATAAACGGGACTATGACACAAA 1438767 36 100.0 30 .................................... ATTTTTTTTCGAACTCATATTTTTTTAATT 1438833 36 100.0 30 .................................... AATGTTCAATTAAACGAAAGTTTCATAACG 1438899 36 100.0 30 .................................... AAAAGGAAAGAGATAAACACGACACTACTT 1438965 36 100.0 30 .................................... AAAAAGAGCGGGATTTGTATGAAACCGAAT 1439031 36 100.0 30 .................................... CAGAAATTTGGGGAAAAGGATTGATCGATT 1439097 36 100.0 30 .................................... TATCAAAAGATTTAATTCATGTTAATTCAT 1439163 36 100.0 30 .................................... ATGTACCAATTTATAAATATGAGTTAAATT 1439229 36 100.0 30 .................................... TTCCTTGTTGCGCCGTCGCCCCCGCGAGAC 1439295 36 100.0 30 .................................... AAAGAAGAATTTATTAATATCTTTTTACGA 1439361 36 100.0 30 .................................... ATTTATAAACAATTTGTTGCACGACTTTAA 1439427 36 100.0 30 .................................... TTGATAAAGAGGGAAACATCTTAAAGAAAG 1439493 36 100.0 30 .................................... TCAAAAAGCATAAATTGGGACACGGAAGAA 1439559 36 100.0 30 .................................... TTGATAAAGAGGGAAATGGATTAAAAAAAG 1439625 36 100.0 30 .................................... TTTAAAAATAATAATTAAATCCTAGTTTTA 1439691 36 100.0 30 .................................... ATAATGATAATATAAAAAAACTTGAGTTGA 1439757 36 100.0 30 .................................... TGTTTATGAACTGAATTATGAAAAGGAAAA 1439823 36 100.0 30 .................................... TACAAAATAACATGGAAAGAATTAAACAAT 1439889 36 100.0 30 .................................... TTTTTCTAATGCTTCTTGTTTCTTTTTAAT 1439955 36 100.0 30 .................................... CAGTTAAAAGATATGGTGGGTCTTTAAGAT 1440021 36 100.0 30 .................................... TTGATAAAGAAGGCAATGAACTAAAGAAGG 1440087 36 100.0 30 .................................... TCAAAAAGTATAAACTGGGATACAGAAGAA 1440153 36 100.0 30 .................................... GGGATAATAAAGAATTAGTATTGTTAGAAG 1440219 36 100.0 30 .................................... CAAACATCTTAAATAATAAAATGATAAAAA 1440285 36 100.0 30 .................................... CAACTCCATAGAATACCTTTCCAATCATAT 1440351 36 100.0 30 .................................... TCAAAAAATGAAGATTTTATTGTTAGAAAG 1440417 36 100.0 30 .................................... CACTAAATAAACTTAAAAATTTAAAATTAA 1440483 36 100.0 30 .................................... ATACAACGCCGATAACACAAACAGCCCCTA 1440549 36 100.0 30 .................................... AAAGTGAAAGCAAAAGTGAACATGACACAT 1440615 36 100.0 30 .................................... CATATCTTAAAATTTTAGCATTTTCTAAAC 1440681 36 100.0 30 .................................... AATTTGGAAAAGAAACAGGTTTATTGGTAA 1440747 36 100.0 30 .................................... TTTTAATACGGCTAGAATAATGCAACTCAG 1440813 36 97.2 30 ....A............................... TTAAATTTTGAAAATCCATTTGTTTTGTGA 1440879 36 100.0 30 .................................... TAAAAATGAGATTTGGAGTTTCACCGAACG 1440945 36 100.0 30 .................................... CGCTTTTCTGTCATATTCGTTTAAGTTATT 1441011 36 100.0 30 .................................... TACAAAATAACATGGAAAGAATTAAACAAT 1441077 36 100.0 30 .................................... TAGTGTCTGAAAATATTTTAAGAGATAAGA 1441143 36 100.0 30 .................................... ATTCTGCATTTGACAAATATATCTGGACTA 1441209 36 100.0 30 .................................... ATTCTGCATTTGACAAATATATCTGGACTA 1441275 36 100.0 30 .................................... ATTCTGCATTTGACAAATATATCTGGACTA 1441341 36 100.0 30 .................................... TACTAACAACCTTTTATGAAGGTGACAGTG 1441407 36 100.0 28 .................................... TTTTTTAAAAAAAGGCTTAAAAATCTGA 1441471 36 77.8 0 .............AC.......A...G..T.TTG.. | ========== ====== ====== ====== ==================================== ============================== ================== 48 36 99.5 30 GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Left flank : AAAAGTTATCTAAACTTTTTAGAAGAAGGTAATGAAATGCTGGCTATACCTGAAATAATAAAAATAGATTTTTATGACCTTTTTAAAGAGTTATAGAGAAATGAGATTACTTGTTTACTTTGATTTGCCAGTATCAACTAAATTAGAAAGAAAACAAGCTCAGGATTTTAGAAAAAATTTGTTATCTGAAGGATTTATTATGATGCAATTTTCTTGCTATTCAAGATTTTGCAGAAATGATGCTGAATCTTCAAAATATTTTAATAGAGTAAAAAAATTGAGTAATAAATTAAGTGGTGGAGAAGTAAGAATTTTAAAAATTACTAACAAACAATATGAAAATATGTTAATATTAGTAAAAGAACCTAAATTATCTGAAATAAAGCTTTCAAAAAATCCATTGGTTATTTTTTAGTGTGAATTTTGTGCTAATGGATTGATTATTTAAATTTCAAACTGTATTTTCTAGCAATAAAATTATATTAATTTCATTGCTAGAG # Right flank : GTTGACTTTTTTAAATATTATGCTATAATAATTGTGTAGATAAGATTCACATTATTCAAGTTTACTACAGATTCTGTATTAAGATACAAAATCGTAAGACTGGCTGCCTTAAGCAGCTTTTTTTATTTTAAATAATTCTTAATTATGTCAAATTCTTTTTCTTTTCGGATTTTCTCTATTTTATTTTCTATTTCTTTTTCTGAATAAAGGTATACTTCATCAATAAAATTAATATATCTAGGTAACTCAACTAGTTTGTTATTATCAATAAATAATACTTTGTGTCCACTAGAAACTAATTCATATACTATATCTTCATTTTTCACAAAAAATATACATTTTGTATTGAAATCCTTTATTTTAGATAATATATATGATACTTTTTCAAAAAATTTATTCTTAGTATAAATACTATCAAAATCATCAATCAATAATACAGTGTTATCATTTACACCAATTAATCTATTTAAATATATTTCAAGTTGTATATTTACTTTTTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //