Array 1 12814-11945 **** Predicted by CRISPRDetect 2.4 *** >NZ_SJOE01000008.1 Acinetobacter sp. ANC 4177 Contig8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 12813 28 100.0 32 ............................ TTCAAAAAAAAATCCTCACTGGTGAGGATTGA 12753 28 100.0 32 ............................ ATTGTGCATAAGTCCGCATAACGGTGAGGCTG 12693 28 100.0 32 ............................ AGTTAAACGTTTCACAGCCATTACCGATGGCA 12633 28 100.0 32 ............................ AATAACAAAGGTTCTGTTTCAGATTCAGGTGT 12573 28 100.0 32 ............................ TTTTGAGGCGAAATTCATTTTTTAAACTTTCA 12513 28 100.0 32 ............................ TTCATGGTGAAATTTCCAAGCCATCTTAGTAA 12453 28 100.0 32 ............................ TGAGAAAAATGAAAAAGATGAACGTGTAGCAA 12393 28 100.0 33 ............................ CATAGGCTTTAGGACGAACACTTGCGCCATCAT 12332 28 100.0 32 ............................ TATCTGTTGAGCGTTATCTAAGATTTGTAAAG 12272 28 100.0 32 ............................ ATCACCCGAAGACTGGCGCAAAGCACCGCTTG 12212 28 100.0 32 ............................ GATGATCCTGGTCAGGGTGAAGAAAATGATAT 12152 28 100.0 32 ............................ ACTGGAGATAACAATGAAATATTTTCTTGCTT 12092 28 100.0 32 ............................ GAAATATAGTGTATTTTTAAATGTCGCGTCTT 12032 28 100.0 32 ............................ AACAACTGAAGAATCTACAGGGACTGGTGAAA 11972 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 15 28 100.0 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : GATATACGAAAATGGCTAGAACGTTTAGAAGATTATGTACATATTACTTCTTCTATTCGAGAAGTACCTAAAGAGATTAAAGGCTATGCAATCTATAAACGTAAACAAGTGAAAACCAATGCTCAACGTTTAGCGCGCCATCGTGTAAAACGTGGTGATATTGGTTTTGATGAAGCATTGGCTCGTTATAGCAATGTAGTGACTACAACGGCACTACCTTATATAGAGCTGAAAAGTTTAAGCAATTCGACAGCTGAGGATGAAAAGCGTTTTAAATTGTTTATTGAAAAGCAATCTGCGACAAAATCTGAATCTCAGGTTTTTAGCACTTATGGTTTAAGTTTGACCTCATCTGTACCTGAATTTTAACCCAATATTTTTCTACTCTTTAACAGTATAATAAAATCAATAGGTTATGATGGTGGTTTGAAACTTGGGTCTTTTATAGATTTTAAGGGTTAAGCCACTGTTATAGCTTTATTTTTTTGCTATGAACTAAC # Right flank : TTTTTAGCTAGGATCCTCAACGGTTTAGTTAGGATGGGCGTCTATCAGTAAATGTTAGCCTTAGATCTCTCATGTTTTCACCATTTAGGTAGAATGAATAAGGATGAATATCTTGAGATTTTCTAAGTTTAAAATGAGTTTCATTCATTTTGAGCACTTCACAGGTTTTATAAAATAACTGATGTTCTTGCCCCAATAGCAAAATAAAATGCCTTAGTGATGAATTTTTAAGCCAAATATAGAATTTGATTGAGGCGCTTAACTGTCAAATTTCTACAGGAATTATTTAATTATTACTCAGTTTTATTTTTTATAAATTGTTGTATTTTATGTATATAAAAAGAAATTAGAAAAGTATTCTCAATAATTTTATTTAGGGTTATTAGAATTAATGTATCAAAGATCTGCTAGCCAGCTTTCCTAATGAATATCCAGCGTTGATGCGATGAAATTCAATTAGTGAATTTTATTCATCTTAACTTTAGATTAAATCATTTTTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [58.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 62162-63330 **** Predicted by CRISPRDetect 2.4 *** >NZ_SJOE01000001.1 Acinetobacter sp. ANC 4177 Contig1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 62162 28 100.0 32 ............................ AATTTTTCTTTCAAAATAGGCAATCCGTTTTT 62222 28 100.0 32 ............................ TTTAGAACCAATAAAGGCAACAACATTGAAAG 62282 28 100.0 32 ............................ TTTGTTTTTCCAGTATTCCACCAATCCGTGAC 62342 28 100.0 32 ............................ GAGAAAGTCGGCATCATTTGAATATCAAAACA 62402 28 100.0 32 ............................ AATCACTAAAAATACTAAGTTATTGTTTTTAT 62462 28 100.0 32 ............................ CTATGAAAGAGTACCAACACATTTCACTGGAA 62522 28 100.0 32 ............................ AGATTGCTTAGTTTTTTAGATGGAACCTACCT 62582 28 100.0 32 ............................ ATAAATTCATCATGCTTTAAGTAGCATTTATG 62642 28 100.0 33 ............................ CAACCTGCATCGATTGTTTCTACTGCACCTGAA 62703 28 100.0 32 ............................ CGCAGGGTGCGAACTCACAACTTGAGGCAACA 62763 28 100.0 32 ............................ ATTGAAAGCCAGTACAACTCACCTTTTGAAAA 62823 28 100.0 32 ............................ TAGTAGACTGAATTAAGATCACACCAGGATAA 62883 28 100.0 32 ............................ AATTACCTTTATGCTCAATGTTTGGAGAACGA 62943 28 100.0 32 ............................ AGTAGACCGTTTTCATTAGATTTTCTGTTCAG 63003 28 100.0 32 ............................ AAGATAACTTTTCTGAAACTTTATTAACAGCA 63063 28 100.0 32 ............................ GGGGATAAATTAGATATTGACTATCGCAAGAT 63123 28 96.4 32 .................A.......... TTAATCAACAAAACGCTACTTCTCAACAAATT 63183 28 100.0 32 ............................ TTGTTCTTGAGCTGCTTGACGTATTTGATAAT 63243 28 100.0 32 ............................ ATTAGCGCAAGCATCTTCAGCAGAAGGATATG 63303 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 20 28 99.8 32 GTTCACTGCCATACAGGCAGCTTAGAAA # Left flank : TTCATGTTGTTGGTGAGGTTGATACTCATCGAGTAAAGCCTACAGATATTGAGGTCATCCATATCGAACGAATAAAATAAAATTTAAGCTATTTGGGATTGTTCAAAAAATTTCAAGCCAGTCTTAAGTATATTGATTAAAGCCATTCTAGGTTTTTCGTACACTAGAATGGCTTTAATCTTTTGAGGGTGTCACGATTTTAAAGTAAGACTTAGTGGATTGTGAGTCAATGTCAGCTGCTAGTGATCAATGAATCGGTTTAGGATCGCATCTGAGTGTACATATATTGAGTTTGCTATTTCCTTTTGATCTTGCTCACTTTTATTTGGAAATTGAGTTATATTTATTTGACGGTGAAAGACGATTTTACCCAATATTTTTTCGCTCATTAATAGATTAGTAAAATCAATAAGTTGTATTTATGCTTGGAAAATTGGGTTATACTTCTTTTTTTAATATTAAGTCATTGTTATAAAAGTAGTTTAGAGTATTGAATTACT # Right flank : ATTCTGCATATGGCTTCGCCGCCTGAACACCGTGTTCACTATTTATAAGAAGCTGAATTAAGCCGTTCACTTTTCTAAAAGATAGAGCGCCGTATGGCGCTCTATCTTAGGTTTCAAATGTCTTAATCTGCGCTATTATTTTAAGCTGCAGGTATTTACAGGTTTGCCTTGCTCAACGGAGTTGATAAAGTCTCCAATCAGGAATTCACTTTGTCTTAAGGAGTCACGATGATCTCCATTCTTGACGGGGTGAAACGCCATCGGTTTTCGCTCTTTACATACTTGTTGATAATAAGCGTAGGTTCCGCGGTAATCGACTAGCTGATCTTTCTCGCCTTGAACAAGTAAAAGAGGCACATTGGGTGTCATATTTTCAATAGACTGTTTTTTTAAATAGTTTGTCAGAGGCGTCAAATTAGCATTAGATTTGAAAACAGTTTTAGGTGCTTCTTTTAGATCAGATTGCAACTCAGATAAACAGCGATTGCGAGCATAGTTCA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCATACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.20,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 102270-103080 **** Predicted by CRISPRDetect 2.4 *** >NZ_SJOE01000001.1 Acinetobacter sp. ANC 4177 Contig1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 102270 28 100.0 32 ............................ ATCATCTTTTGCAATCCACATACCGCCAAGCT 102330 28 100.0 32 ............................ TATTGGTTCTTATTTTTTAGCTTATCTTGGTG 102390 28 100.0 32 ............................ TGATTATGTAATGCGTGGAATTGAAGATTTTA 102450 28 100.0 32 ............................ GTTAAAATACGAGCCATACATACCATTCGTTG 102510 28 100.0 32 ............................ CAATGGCGCAATTCTTTTTTATGATGAATGTC 102570 28 100.0 33 ............................ TAAGTCGTCGTCAATTAATTCTATATTGTCCCC 102631 28 100.0 32 ............................ CGCCGCATCGATCGGTATAGGCGACGGGATGG 102691 28 100.0 32 ............................ TCGCCCGCGCTTTGGGGCTGCTCCACTATTTC 102751 28 100.0 32 ............................ AATTGAAGCGTCACCACTGCCGCCTCCGCTTG 102811 28 100.0 33 ............................ ATCATTAAATGAATGCTATACAAAATCTGCTCG 102872 28 100.0 32 ............................ ATATTCTCAAGATATGAGTTTAAAGGGCTGGA 102932 28 100.0 32 ............................ TAACAAAGACAACGCCCTGTTCTATCAGCCAT 102992 28 96.4 32 .................T.......... TGGATGAGCATCCGCTATGCGTCGAGTACTGC 103052 28 92.9 0 .........................T.G | T [103076] ========== ====== ====== ====== ============================ ================================= ================== 14 28 99.2 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : TTGAAAAATAATTATTATGTACATTATTTAGGTACTTATTAAGACCTCTTTATTCTCACTGACCTTTGAAATATTGCAAAGCGCGTATACATTCGTTATGTCTTGTCCCATAAAGAATATGACAAAGGTCATTGGAAGAATGGGTTAGTATGAATGCAATGATTAAACAGGCTTTAGATCACTGGCACTGCGTTGCACCATTGCTTAGCAAGCCTAAAAATGAAGATGACTTCAATACACTTGTTGAGGCCTTGGATGACCTTTTGGATACTTTTTTCTAAGACCAAGCTTCAGGTACTTTCTCATTTGCACTTAGTGACTTTCATTTGAAAATTGAGTTATATTTATTCCGTGGTAAAAGACGATTTTACCCAATATTTTTTCTTTCTTTAATAGATTATTAAAATCAACAAGTTATATTTATGCTTGAAAAAATGGGTTATAACGTTGTTTTAGTCTTAAGCTACTGTTATTAATCTAATTTTAAGTGTTAAATTACT # Right flank : GTAATTCCGCAAGTAAGGTCAGCTTAATATCTGTCACATTAACGCATTGTCAGAGTGCTTTAATGTCTCAGCGGATACTTTTTTCTAAGTAGAGCGCCGTGTGGCGCTTTATTTAATGGAGTACCTTTAAATCTTTCACATCATAAATTTGCGCACTCCTATTCGTATCAGTCACAAGGCACATAGATTTTAAACAGATATTGGTTAGGAACAGTTTTTGATCGGTATCTTGGCCTTTGACTTCAACCAAAGGGTATTTATCCTGGGAATATTTTTCATTTTTAATTGAGATTAAAGTCGAATTAAAGTCACTTGATGCTCTTTTTTTTCCATCATCTATAAGATGTTGACCAATATTCAATACATTAATAATACCAGCTAAAAGCAAGAGCAAAACTGAGTTATGAATGAAAAATGATAAGTCAAAAGTGAAATTTTGATTTATTGATGATTCCTGATTGTCGCCATATATCTCTTGTTTAATTTGAGGTGTCGTTAGG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //