Array 1 269073-271359 **** Predicted by CRISPRDetect 2.4 *** >NZ_UKFS01000002.1 Klebsiella pneumoniae strain EuSCAPE_AT009, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 269073 29 100.0 33 ............................. TTCGCTTACTCTTCAATTGAAGAAGTGGAGTCG 269135 29 100.0 33 ............................. CAGAAGAGGCATTAATAGAGGTGGTAAACCGCG 269197 29 100.0 33 ............................. GCCCGCGCGAACCTGGGGCTGGGAGATTCAGCG 269259 29 100.0 33 ............................. TTGGCGGTCGACGGTGGCGAACTGCCTGATCAG 269321 29 100.0 32 ............................. GGGGGGAAATCAAGGTCAAAGTTGAGCTGGAT 269382 29 100.0 32 ............................. CCTCGATCATTCTTGCCAGTTGGGAGTCGGAC 269443 29 100.0 32 ............................. CACCTCGCCTATAAATCGTACCAGCCTGACAG 269504 29 100.0 32 ............................. TCGTAGCTAATAAATTCGTTGCTCATTTGAAA 269565 29 100.0 32 ............................. CGGCTGCGCTGTTGCACATAGCCGCTCAACCT 269626 29 100.0 32 ............................. CGGCCGCGTTCTCCCCTGTGGGAGGGGTGGGG 269687 29 100.0 32 ............................. GAATTTATTGGGAGGTGATAGCTCTGGCAGGT 269748 29 100.0 32 ............................. CGTCACGACGCCGGCGACAGTGACATCATCCA 269809 29 100.0 32 ............................. GGTATGCAGGGCACACGCCAAAATAATTTTGC 269870 29 100.0 32 ............................. GTAACAGGTCAACTCTTTATCGCTAACGGCTC 269931 29 100.0 32 ............................. CTTTTCATTTTCTCATGACCGCCACCATTTCG 269992 29 100.0 32 ............................. AATACCGGCGGCAGGGATTTACGCCCGAGCAG 270053 29 100.0 32 ............................. CGCACGGTGCATTCACGCCCGCGCGCCTGTTT 270114 29 100.0 32 ............................. CATCGCTTTCCATCGCAGCTTTTTCCAGGCGC 270175 29 100.0 32 ............................. GTGACGCGCTGCAGTTTGCCAAAACCCTGCCA 270236 29 100.0 32 ............................. ATTTTGCGTACGCTCTCCCACAGCTGATCGTG 270297 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 270358 29 96.6 32 A............................ GGTTTATAGAGGCTGAGGTATTCACAATGCGC 270419 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 270480 29 100.0 32 ............................. GGCCTGAACCAGAGCACGATCTACACCTGGAA 270541 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 270602 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 270663 29 100.0 32 ............................. TCGACGCCCCGGAGTGGGAAGACTTTGGCACC 270724 29 96.6 32 ..............G.............. CAGCGCATACGGGTTAAACCGGATCACCTCTT 270785 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 270846 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 270907 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 270968 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 271029 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 271090 29 100.0 32 ............................. GGCCCAGTAATCCCCGCGAAGTCCTGAAGACG 271151 29 100.0 32 ............................. GTTGCGAAGCCTACGTCCAGATCGTAGAGATA 271212 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 271273 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 271331 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 38 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGTG # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //