Array 1 472787-472937 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHZC01000001.1 Streptomyces chrestomyceticus JCM 4735 strain NBRC 13444 sequence1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 472787 29 100.0 32 ............................. GAAAAGCGTCGCTCGACGCTCTCGGCCAAGGC 472848 29 100.0 32 ............................. GCGGCACCGGGGAACGGCTCGTACAACGGCGC 472909 29 89.7 0 .....................TC....T. | ========== ====== ====== ====== ============================= ================================ ================== 3 29 96.6 32 GTGGTCCCCGCGCGTGCGGGGCTGTTCCC # Left flank : GATCAAGGCCATCAAGTAAGGGCGGTCCGGCCGTTACGGCATCGCCCTGACCGGTGCGGCCTGCGCGCCCTGTCTGTCTCCGTGTTCGGGGTGGACAGGGCGCGTCGCTGCGGGAGGCGCCGGGCCACAACGATGCCGCGGCGGCGGAAGGGCGGTGATGATGGGGCCGGGCTCGTTCTTCTCAAGGTCGGCTTCATCGACGTGCACGCACCGCGCATGGCTGTTTCCCGCAGTTTCCACCAACTCCCGGGAGAACCCCCTGCAGAGGCTCGCCGCGCCGCCTCCCGTCGATCACAACGAGCGGGTCCCGAACCACCCACACCAATAAGGGGCCCGGCGCCCCGAAAGCACGCGAGAATACCGACGCGGCTGAACCGTCCCGGTCGCACCCCGCACGAGGGAGCAGCCCGTCGATGCCTGAACATATGCCAGTTATGCCGGAAGCCGCGAAAGTAAGTAAAAACCGCTTCCTTGCCTGACGAAGCCGCTGGTCACGGCCT # Right flank : CACCCTGCACCCCGCACTCAACACCGGAAGTCTCACGAAGGCCAAGGCACTCCCGGTAACGGCATTGGTCTGGACCTGGAGGCCGCCAGGTCGCCATGCTGTTGACGAGCACACGCCAATTCGCCCACCCCTCGGTGTGGAAAGGTCCCGTCATGCCCCCACAGTCGCCACAGCCCGTGGAGCACACCGGCCGAGCCACCACGACCTCCGGCCTCGCCCGCCGCTCACTCCTCGGGGCGCTGGGCGCCGGCGTGCTCGGCGCCGCGTCCGGGCTCCACGCTCCCGCCGCGCGGGCCCTGCCGTCACCCTCCCGGCCGGAGGCCGCCGGCCTGCGACCGGCGTTCCTGGGTACGTACGGCAACGGCATCATCTCCTGCACGTACGACACCACGACCGGCGCCCTGACCCGGCGGGGCGGTTTCCCGGCGGTGACCGACCCGTCCTTCCTCGCGGTCTCCCCCGACGGCAAGGTGCTCTACTCCCTCGACAACAGCGGACGG # Questionable array : NO Score: 5.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGCTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGCTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1902412-1902686 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHZC01000001.1 Streptomyces chrestomyceticus JCM 4735 strain NBRC 13444 sequence1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =================================== ================== 1902412 29 96.6 32 .T........................... CGCAACTCGAAGGGCGCGTGGGGCCCGATCCA 1902473 29 100.0 35 ............................. TGGCCGCCCCGCTGGAGGATGTTCCCTTCACCCTT 1902537 29 100.0 32 ............................. CGACCGCGCCCGCGCCCGCACCGGATGCTGTT 1902598 29 89.7 32 ............T..........C....A CAGGCCCACCGCATGGTGGCCTTCGCTGCCTT 1902659 28 93.1 0 .........................-..T | ========== ====== ====== ====== ============================= =================================== ================== 5 29 95.9 33 GCGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : TGTGGCTGTCGGCGTCGATGACGGGGTAGTCACGATGAGCGACCATGTACCACTCCTTCGGGAGATCCCGGGAAGGTCTGTCGGTCGGCGCACCCGGCCCGCGGACCCGCACACGCGCACTCAGGCCAGTGCCGGCCGGCACGCCCGTACGGATGTCGTCCCCGCGTCCGAGACTCCGGACCATTGTTCCCGCCCCACGGGGAAAGGGAAGAGCGCCGTACGGGCAATGGGGGCTCAGGGGGGTTCTGGCGTTACTTCTGCACCGTTGGTCTCTTGCGTGTGGGAGGCGGGCATGGGGCAGGGGGGCGTGGGTGTGGTTGGGCTACGGGGCCGGGAGGGGGTTCGATGTCGTGGTCACCCAGCCAAGTAGGTTTAGCGCAACCGGTAACGGCCTTTCTGCGGGAGCGGGCGGGGTAGTTGACCAAATGTCAGGTTTGCCGGAATACTCGAAAGTAAGGAAAAACCAGCGGCCCGACTGGCAACGCTGCTGGTCGCGCCCT # Right flank : TACCCCCCGACCACCCCCGAACCACCTCAGTCCAAACAGAACTCATTCCCTTCCGGATCGGCCATCACGATAAAGCCAGCATTCATCGGAGGAGCCGGCTCATGTCGGCGTACCCGCGTGGCCCCCAGAGCAACGAGGCGGTCGCACTCGGCCTCCAAGGCCGTCGTACGCTCCTCGCCCTCCAGCCCAGGAGCCGCGCGGACGTCCAGGTGGACGCGGTTCTTGGCGGTCTTGTCCTCTGGTACCTGTTGGAAGAACAGGCGGGGGCCGTGTCCGTCCGGGTCCTCGATGGCGGACCTGGTGTTGCGCTGGTCCTCCGGTACGCCGATCCGCGCCAGGAAGTCTTCCCACGCGGCCAACGGGTCGGCGCCCGCGGGCAGGTCGACTCCGGGTGGGCCGGGGTGGACGTAGCCCAGTGCGTCGCGCCAGAAGGACGACAGGGCGCGCGGGTCGTGGGCGTCGAAGGTGAGTTGGACGTGGCGGCTCATCGGGGTGCTCCG # Questionable array : NO Score: 5.78 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.40,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 6437745-6437293 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHZC01000001.1 Streptomyces chrestomyceticus JCM 4735 strain NBRC 13444 sequence1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 6437744 29 100.0 32 ............................. GGCCCGTACCGCGAGGGCGTAAAGGCCGCCTG 6437683 29 100.0 32 ............................. CGCCGGGCTCTCACACACCGGCAGCCGGGGCC 6437622 29 100.0 32 ............................. CTTGCGTCCATTCCGCCCGCGGAGCTGTACGG 6437561 29 96.6 32 ...................A......... GAGTCCCTGCTGTCGATCAGTGACACCGGTTC 6437500 29 100.0 32 ............................. CCTCCGGCCGCAGGTGCAGCACGACACTGGTG 6437439 29 96.6 31 .......A..................... GGCCCCAGCGGGTGCGGGCTTCCTCCACGCC 6437378 29 86.2 24 .....................TC....AG CCACAGAAGGCTCCCACTCGTGGT GGGC [6437352] Deletion [6437326] 6437321 29 75.9 0 ...C....T..C.....A...A..GC... | ========== ====== ====== ====== ============================= ================================ ================== 8 29 94.4 31 GTGGTCCCCGCGCGTGCGGGGCTGTTCCC # Left flank : GCTGTGGTGACCGTCATCATCCTCGCCAACTGCCCCGCCGGCCTGCGCGGCTGCCTCACCCGCTGGCTCCTGGAGATCTCCCCCGGCGTCTTCATCGGCTCGCCGAGCGCCCGCATCCGCGACCTCCTGTGGGACGAAGTCCGCCAGTACTCCGACAAAGGCCGCGCCCTCCTCGTCCAGCAGGCCGACACCGAACAAGGCTTCACCTTCCACACCCACAACCACGCCTGGCACCCCACCGACCACGAGGGCCTCACCCTCCTTCACCGCCCCGCTCCCCGTACCACCCAACCGGAAACAGGCCGCTCACCCAAGCCACCGAAACAGAACTGGAGCAAGGCCGCCCAACGCCGCAAATACGGCCGCCGATAACTACACGGGCCCACATCCTTCACGAACGGAGCACCCCGCCGATGCGCGAACAAATGTCACTTATGCCGGAATCCCTGAAAGTAAGTAAAACCCGCTCCTTCGCCTGACAAAACTGCTGGTGACGTCCT # Right flank : CGCACTGGCGGGCCGTTACTGAGCTTGCAGGCGTGCTGTCGTCAGGTGGGTCTGTGGGGCCGGAGGCATGTTGCGGCAAGGCAACCGTCGATGATCTCTCTGCGGTACTGGATCATGCGGAGTCCGTGTCGTAGAACGCGCACGAAGTGCGTGGGGTCGGCAAAGGCGGTATTGGCCTGGGAACTGCGTCGCAGTAGCGACCAGAACGTCGGCCGCGCCGCGCCTTCCCCCATTACGGCGCACCGCCTCCGCAGCAGCCCGACCGCGCGCATCTTGTGACTACCGGTCGTACACGCGTCCTCGACGTACCGAGCAGGCGGCTCAGCAGTGGGCGACGACCAGCAACGTGCCCAACTGCTCCCCGTTCGGTGCTGCCAGGACGCGCGCGTCCGCATGGGTGAAGCCGGCCCGCTTGAGGTGGTCGGCCCAGGACTGGGGCGGGTATTGCCAGCGCGGTACGGTCAGCTCGCGCTCGCGGCCCTCCAGCCATTTGCCCCGCA # Questionable array : NO Score: 5.89 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:-0.06, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGCTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGCTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 6832727-6832212 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHZC01000001.1 Streptomyces chrestomyceticus JCM 4735 strain NBRC 13444 sequence1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =========================================================================================== ================== 6832726 28 100.0 34 ............................ CCGTGAGACCGGACCGCACTGCGCTGACCTGCGA 6832664 28 100.0 33 ............................ CTGGCTCCGGATTCTGGAAGTCGTCGCGGGTGC 6832603 28 100.0 34 ............................ CCTTATGCTGCGCCCGGCTTACCCGGGGAGACCC 6832541 28 100.0 33 ............................ CGTCTCGTGCGGGTCGACCCTGTCGAGCACGTA 6832480 28 100.0 33 ............................ CTTCAGCGGCCGGGCTGTTGCGATCTTTGAGTT 6832419 28 100.0 91 ............................ CCTCGGCGTCGTCGTGAATGCCATCACCCCCAGGTGGTCCCCGCGTGAGCGGTGTTCCCTTCCGGTCGAGTTCGGCATGGGCGATGTGCCC 6832300 28 92.9 33 ............C........C...... CTCCGATCTGTACGCGCGGCTGTCCGCCGCATC 6832239 28 75.0 0 ....C......A.AC......CC....T | ========== ====== ====== ====== ============================ =========================================================================================== ================== 8 28 96.0 42 GTGGTCCCCGCGTGGGCGGGGGTGTTCC # Left flank : ACTGGTCGCCCTCGACCCCGACTCGGTCGTGGACTTCGCCCGGCACTTCGAGTCCCGGGACCGCCGCGCCTACACCTGGGACCTGTGGGCCGCGGCCGGCATCCTGCTCGGCGGCGCGAGCGACGACGCCTTCGACAACTTCCGGAGCTGGCTGATCGGCCAGGGCCGGGAGGTCTTCGAAGGCGCCCTGCACGACCCCGACCACCTCGCCGACCTGCTGGACGCGTTCGACGACGAGGTGGACGGCGACGCGGAGGAACTCGGCTACGCGGCGGACGAGGCGTACGAACAACTCACCGGCGCCGAAATGCCCGACCTCGGCCTACCACCCCAGCCCCGCGAACCTCTCGGCACCTACTTGGACCTTGACGACGATCGAGTCCTGGCGGAACGGTTTCCTGCGTTGTGGGATCGGTATGGGACCTGATGCCCACCGGTCGGCAACGATGAGAGTGAGTAAAAACCGCCGCGTCGGCTGACAGAATCGCTGGTCGCGGGCT # Right flank : CTCGCCGCGCCACAACACAAGCCGCGAGCGCCGCGTGCCGCCTTCACGGCGGGGCGCGGCGCTCTTTCCGTGGGGCCCGAGCCGGCCCACGGCGGCCTGCTGCCTAAATCTCTTGTCGCACCTAGAGCCCGTAGGCTATACCTAGGAGCCTTAGTTATAGCCTAAAGTGACTAGGCAATGACACGGAGGACAGCCACATGGCACGAGCCGGACTAACAGCGGACCGAGTGACGCTCGCGGCGGCCGAGCTGGCGGACGAGGCCGGGCTCGACCAAGTCACCATGTCGCAGGTGGCACGGCGGCTCGGTGTGAAGGACGCGAGTCTGTATACGCACGTCCGCAGCCTGGAAGACCTGCGCGGACGGATCGCACTGCTCGCGGCGGACGAGAAGACCATCCGTATCGCGGAGGCGACCGCCGGGCTCGCGGGCCAGGACGCGCTGGTCGCGTTCGCCGACGCCTGGCGGGAGTACGCGGCCGCGCACCCGGGCCGCTACATG # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:-0.71, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGTGGGCGGGGGTGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGAGGGCGGGGGTGTTCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.90,-13.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [20.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 5 7987349-7986838 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHZC01000001.1 Streptomyces chrestomyceticus JCM 4735 strain NBRC 13444 sequence1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 7987348 29 100.0 32 ............................. GTGCCGTCGGCGAGGATTTCGGCTGCCAGGTC 7987287 29 100.0 32 ............................. GCCACCATCAACGCAGCGGCGGCTGCGGGCCT 7987226 29 100.0 32 ............................. GCGCCGCTCGGCTCGTGGCAGATCGGGGACGA 7987165 29 100.0 32 ............................. GATCCTCTCTGCGCTGCAGGAGGTCATGGGCA 7987104 29 82.8 29 ...................A...CCC.T. CCCCGAAAACCGGGGGACCCCGGGGGGAG 7987046 29 100.0 32 ............................. CTCGCTCTGCACCTGGACGACCGGCCCGGCGC 7986985 29 89.7 30 ....C................T...C... GCGCCACAGGCGCCCTCCGCCGCACCTCGC 7986926 28 89.7 32 ........-........A...C....... GCGTACATCGTGCGCGCCGCGCGCTGCCAGGC 7986866 29 69.0 0 T.........T.......A..CGCAC..T | ========== ====== ====== ====== ============================= ================================ ================== 9 29 92.4 32 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : CTCCGCAACAAGGTGGAGACCGGCTTCCACCTGTACGGGACGTTCGTCCTCCCGCCCGCGAGGCTCCGAACGTTGGAGGCGTTGGTGACGGAGGCGATCGCCAACCCCGGCGCGCCGGCGTACCGGGAGGCAATCGCGCGGTTGACCGTGATACGCGCGGCGTGCGCATCCAAGATCGACACTGTGGCATGAGGGATCGGCGAAGCGGCGGAGCTGTCGCCGGGGGTGAGCGCCACCAGCTCACGAAGAGGACGCTCGCACGCCTTGAGCGTGCTGTCGATTCTGCGTTCTGGGGGGAGCGAGACGGGTCAATGCGTGTGCTTTCGCCATTGCCTTGTTGATGCGCCTTAGCCTGTCCCCTGAGATCCCTGACAGTCGCAACTCAAAACCTGCGCGAGCGGAGCAGCCAGTCAACACTGGAAGGAATGCCAGGTATGCCGGATCCCACAGAAGTAAGTAAAAACCACCACCTCCGCTGAAAGATGCGCAGGTCACGGCCT # Right flank : GGCTGATCAACCCCAGCTCCGCGCCCAGCCATACCTCCGCCCGTACCCCCTCAGGCTGATGAAGGCACGCCTCTAGCGACCGCCTCCACCCCCACCCCCTCCACCTCCCGGCTCGTCTTCGTCCAGCCCGTTTGGCCGCGCAGCATGCGGAAGAGGGCTTTCCAGGCGCAGAGGAAGGACATGTAGTTCATGACTACGAAGGAGTGGCCCAGGAGTAGGGCGCGGGGTAGGCCGACGGTTTTGTCGCGGCGTAGGTAGGTGCAGGAGGTCAGGAGGGCGGGGGCGAAGGCCAGTAGGTACCAGGCCAGGAGGTTGAGAGGGAGGCGTAGGCAGGTTTCGTTTATGGCGGTGGCTGGTTTGCCTCGTAGGACCAGGACGTCTGGGCTGCGGAGGAAGAAGTACAGGCAGTACTGGAAGAGGAGGGACCAGGGCAGGTCCAGCGCCCATGGAACCAGCAGGTAGGCGAACATCTCCAGGGCCGCCAGGTGTCCCATGCGCGG # Questionable array : NO Score: 5.88 # Score Detail : 1:0, 2:3, 3:0, 4:0.62, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.70,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 6 8679259-8678923 **** Predicted by CRISPRDetect 2.4 *** >NZ_BHZC01000001.1 Streptomyces chrestomyceticus JCM 4735 strain NBRC 13444 sequence1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 8679258 29 100.0 32 ............................. GCGAGTTGGGCATCGGCGACTGACCTGGATTG 8679197 29 100.0 32 ............................. CCGGAGGGGAACTGGGAGGGGTCGCCGGCGCC 8679136 29 96.6 32 .....................A....... ATCCCGCGGCGTCGATCAGGTCGCCCGAATCC 8679075 29 100.0 32 ............................. ACGTCGGCGACGCCGTTGATGGCCGCCGCCAG 8679014 29 100.0 32 ............................. GTGGCCGACCGGTGGTCCGTGCCCGTAGTGAT 8678953 29 93.1 0 ......................G..G... | A,A [8678928,8678934] ========== ====== ====== ====== ============================= ================================ ================== 6 29 98.3 32 GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Left flank : GTCGCATGGGTATGTCTGCACCGGGCATGCCGACTGCGAGTACGCCAACAGGGGTTGCCGGCATCCGGGGCGCGACCATCACCACCGTCAACCGGCAGGCCGTACCGAAGAGCGGAGCGAAACGTGCATCGCGTACGGGTCATCGGCGGCGGGATCGCGGCACGGCAACCGCCCTGGCGCAGCCCGGCCCTTCGGACACAGTCACCGTTCCCGGCACTCCGCCGCGTTCGACGCGGCTTCTCGACGCCCGAGGAGGCGAGGTGGCGCACGCACGGACGGGAGAGGCCAAGGACGCGATCCGTGGGCCAGGAAGGTCTATCCTGCTCCACCGACCACAAGTCCAAGCCGCGAAACACCTCACCTTCGAATCAACGGCTTCTCCATCGAGGAAGAGCAGCGACTCAATGACCGAGAAAAGGACGTTTTCGCAGCGTTTGCCGGGATCTCCAGAAGTAAGGAAAAACCACCACCGCGCCTGACAAATCCGCTGGTCGAGGCCT # Right flank : CACGCCCCTTGCCTGCCCGGTAGTGGCGCCACCGTCGCCAAACCGGTGCCGTGACGCAGACGGGCGGCCCCCACACACAACGGCCGCCCGCCCCCCTAGAGCTCCCGCCGAAACGTCACCCGATCCAACGCGGGACCGTCGTAATCCGTGATCGGATCCGACGGGATGAAGCCCAAGGCGCGGTGGAAGGCGATGGAGCGGGTGTTTTGCGGGGACGTGATGGCCTTGACCACGGTTCGGTGGTGGGCGCGGGCCATGGCGAAGAAGCGTTCGTACAGGAAGCTGCCCAGGCCGGTGCGGCGCCAAGTGGGGGCTACTCCCGTGAAGTGGATGTACGCCTCTTGCGGGTTGGACGGGGAGAGGAAGCCGATGACGAAGCCTGCCAGTTCGCCGTCGCGTTCGGCGATCAGGCTGGTTTCGTAAAAGTGGTTCACGAAGACTCGCGTCAGGTCGCGGGAGGCGGCGCGGCCCCACCAGTCGTCGACCACACCCACGATGGC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //