Array 1 1032126-1033313 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP053573.1 Citrobacter sp. TSA-1 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
   1032126	    29	 100.0	    32	.............................	CATAGAAAACCCGAGTACGCCGATCACCTGGG	
   1032187	    29	 100.0	    32	.............................	AAATATTTCCTGATGCTGTTACCGTTGAATAT	
   1032248	    29	 100.0	    32	.............................	CAAATATTAGATGCAACAGGCGAACATATTAT	
   1032309	    29	 100.0	    32	.............................	CCGGAACATCATCACTATCATCATTAAAAAAC	
   1032370	    29	 100.0	    32	.............................	TGGTCGCCGGGCACTCCCTGAGATGATGCGTT	
   1032431	    29	 100.0	    32	.............................	CACCCCTCAGTAATGTCGATCGGCGTGATAAA	
   1032492	    29	 100.0	    32	.............................	CCGACTAACCCACGTCGCGATCTCGTAAAAGC	
   1032553	    29	 100.0	    32	.............................	TCACCGTGGGTGAATGTTCCGGCGAAGTGCAG	
   1032614	    29	 100.0	    32	.............................	GAGTCCGTCGAGTTGCTGGCCAGTCTGTCAGA	
   1032675	    29	 100.0	    32	.............................	TTGTGTGCGTAGCTTTTTGCCAGGGTGAGCGC	
   1032736	    29	 100.0	    32	.............................	AGAATTTCGCATATATTCCGGCGAATTTTCCT	
   1032797	    29	 100.0	    32	.............................	CAAATGACGGGAACCGGATTCGAAGGGACCAG	
   1032858	    29	 100.0	    32	.............................	CAGTCCACGCGGTGAGAATAACGAGTTCTGGA	
   1032919	    29	  96.6	    32	............................A	GAACCAGTGATGGGGGCGCAGGTTGATGGACT	
   1032980	    29	 100.0	    32	.............................	AACGCGACGGCCATTTATTCGCGGAAATGGAG	
   1033041	    29	 100.0	    32	.............................	CATCATCAACCAGACCTCAGGGCGCATTGACA	
   1033102	    29	 100.0	    32	.............................	ACAACACGCAAACCCTGCAAGTTCCTGTGTGT	
   1033163	    29	 100.0	    32	.............................	GCTTCACCCAGTGCCACTTCTTCGCAGGAATC	
   1033224	    29	 100.0	    32	.............................	ATATACCTCAGCTCTATATAGTGTTCTGCCCT	
   1033285	    29	  89.7	     0	............T............T..A	|                               	
==========	======	======	======	=============================	================================	==================
        20	    29	  99.3	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   ATTGATTGAAGAAGTGCTGGCTGCCGGGGAAATTGAAATCCCTAAACCTTTTGAAGATGCCCAGCCTCCGGCGATCCCTGAGCCTGTTTCATTGGGCGATGCAGGGCACAGGGGGTAGCACCATGAGTATGCTTGTTGTTGTCACCGAAAATGTTCCTGCTCGTTTGCGCGGTCGTCTGGCTGTCTGGTTATTAGAAGTTCGCGCAGGTGTTTACGTTGGCGATACCTCACGTAAGGTGCGAGAAATGATCTGGCATCAGGTCACTACCCTGGCAGACGAAGGGAATGTTGTTATGGCTTGGGCGGTGAATAATGAGTCTGGTTTTGATTTTCAAACATGGGGTGAAAACAGGCGCATGGCGGTGGAACTGGATGGATTAAGGTTAGTGTCATTCCATCCTTCGTAAAATCAATGGGTTATAGTTCTTTAATAATGTGGAAAATTTGGTGAAATTTTTCTACGGCTATAATCCCTTTTAGATCAGTGATATAGTTTTAGA
# Right flank :  ACTTTGAAAGCAGAAATATTATGGAGCTGGATGGGTTACGAGGATTTACCCGCCTTTGCCAGTTCTTTCACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCTGCGTTGTCGAAGACCTCTGCGTCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGCGCCCGGTCGCGCGTCAATTTTCGCACCGCTTCAGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTT

# Questionable array : NO	 Score: 6.22
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-4] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [71.7-55.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.92,0   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
//