Array 1 282658-281170 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP048019.1 Pediococcus acidilactici strain CACC 537 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 282657 36 100.0 30 .................................... GTGGATTAGTTACTAATGGAGATTTAGCTA 282591 36 100.0 30 .................................... GGTTATGATGTTAAGGTTTATGAAGGAGAG 282525 36 100.0 30 .................................... TTTTTGACTAATAATATACACGTTCGAATA 282459 36 100.0 30 .................................... ACACGTTCCTGAATATGTATTTGATAACTT 282393 36 100.0 30 .................................... TATCCGGTAACTGACCAGACGAAAGAGGTA 282327 36 100.0 30 .................................... GATTACGTAAGCTTTCGGGCATTGTTCTTA 282261 36 100.0 30 .................................... TCTGGTCTTACTTTTTAAAATGGCAAAGCA 282195 36 100.0 30 .................................... TAATAGACCACATAAGGCGGGTTAGTCTTG 282129 36 100.0 30 .................................... TCTGGTCTTACTTTTTAAAATGGCAAAGCA 282063 36 100.0 30 .................................... TAGCCACCTTAGGTTCGTTACCATGAGACT 281997 36 100.0 30 .................................... AGTGAGTGGAAGGATTGAGCGAGCGTATGC 281931 36 100.0 30 .................................... TCTATGCCCGTTATAACGGAGTGTTTTCCT 281865 36 100.0 30 .................................... CAAAATTCTCGACAAAATCTTGGGATTATT 281799 36 100.0 30 .................................... AAGACGGCACAATTTTCGTCATCCCGTCTG 281733 36 100.0 30 .................................... GGATTCGGCAATGGAATACGCCAAAGCCCA 281667 36 100.0 30 .................................... ATACGTACATCTGGTACGGCGTTGGCGATA 281601 36 100.0 30 .................................... TACCAGCTTTAGTTAAGCTAGTGACTTTTT 281535 36 100.0 30 .................................... TATCGGCTTGTTTTGCAACTTGCCTGACGG 281469 36 100.0 30 .................................... AAGAAGTCTCCAAGTGCCGACCAAAGGTTT 281403 36 100.0 30 .................................... TCGATTTCATGTTCGAATGGCGAGTGCCGT 281337 36 94.4 30 ............................C.G..... AAGTGTATGAGCCAAAATTAAGTCTATAAT 281271 36 97.2 30 ..............................G..... AAAATGCTGTGGCTTATGAACTCGATGACA 281205 36 77.8 0 ......A.......CC............C...TCAA | ========== ====== ====== ====== ==================================== ============================== ================== 23 36 98.7 30 GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Left flank : CCAAGATTTAGTTATTCAAAAGTATTTAACTAAGATTGAACGGGTTTTTGCCGAAGGATTGGTGGATGGGCAACGTAACCAAATTCACGATCAGGTCAACCAACTATTTAATACGATTGCTGAACAATTATTTATGCTAGATTTACCGATTAGCGTCAATTATGATTTTGATTTGAAAAAGTTACTGAAGTATTGTGGAGTGCACTTTGATCCGCTAAGCGTGGGTAACCCGTATGGTATAATTGAAGCGGTTTTGAAGATCCACGAGGAGTGCGCGATTAATTCGTGTGTCGTGTTAACTAATGTTGCGCATTATTTAACGGCAAACCAAATTGAAGAACTTACCCAGCTAGTAAGTCAAACGAATCAAGCACTCTTACTAATCGAATTCACAGAAATAGGCAATCAGGAGGCCTATGGAAATAGCGAATTCTACTACATTGACAATGACTTTGTTGATTGGCATCAATAATTGATGAAATTTCAGTTAGAAAATAACG # Right flank : AAATAGACATGATTATTTGTTTTAATATTGCAATCCTTAAATCTCCCCCAGCAAAGCAACGAGCTACTTGATAAAGTGTGACAGCTTTTAAGTAGCTTGTTGTTTTTTAGTAATAAAAAACAGCCCAACCGAATCCCAATCCAGTCAGACTGTCTTAAATTTCCTACATCACCAGCGGCAATACCACCAGGCCGTTCATCAAAATGTGTGCGATCATTGAAGTTTGGATGCGTCCCGTTTTATGGTACAGCCAGCAAAATAGCAGCCCAATCGCGGCGTATAAAAAGATGTGGCTGTCGTTATGCATAAAGGCGAACGCTAAGCTGGAAATGATCGCCATGATCGTCAAGCCTAAGTTCGAGCGCATCCCGAACAGCGTGCTTAAATTGCCAAACAAAACTTTTCGAAAAACTAACTCTTCCATAATGGGCGCCCCAACGGTGATTGCCAACACAAAAAACGGGTTGATTTTCGCTAGGGTAACTAACGTAGCCGTGTTC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //