Array 1 32787-30610 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAAUB010000005.1 Tepidiphilus baoligensis strain B18-69 Scaffold5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 32786 29 96.6 31 ...........................G. AAATCCTGCGCTGGACGCGGGCCGGGGGGCG 32726 29 100.0 32 ............................. CGGTCAAAATCACCCAGCGCAGCGTCTCACGC 32665 29 100.0 32 ............................. AGGTTGAGCGCGCCGAGCCCGGCGACCGCGCC 32604 29 100.0 33 ............................. AAGTTCTGCCCGTCATAGCACACCGTCTCGTGC 32542 29 100.0 33 ............................. GCGTGCAGCCGAGCCGGTTCGAGGAGGTGGCGG 32480 29 100.0 33 ............................. CGCGACGCAACATCGAAAAAGCGCGACGCAACA 32418 29 100.0 32 ............................. CGAGCACGAACCGGCCGTAGGCCGTGGCTCGT 32357 29 100.0 32 ............................. AACCCGCCGACCGCCACGATGATGAGCGCCGC 32296 29 100.0 32 ............................. AACGATTCCGCCACGGGTTGCGGTGTTGAAAA 32235 29 100.0 32 ............................. GGGGATCGGGCCTGGGCGATGGAGTGGATCGA 32174 29 100.0 32 ............................. AAGGTGGCGAATTTGGGCAGGACGCCGGTGGT 32113 29 100.0 32 ............................. CTGCCAACCCAGCTCGCAAACGCTTTGTCTGA 32052 29 100.0 33 ............................. ACCTTTGCCACCACGCTCGAGGCGGTTCTGGAC 31990 29 100.0 32 ............................. CCGCACGCGCACACGGCAGCGCGGCGGATCGA 31929 29 100.0 32 ............................. CTGCTGTTGGTCAGCACGCCGACGATAGATGG 31868 29 100.0 32 ............................. CTGCAATTCATGGATCGGTTCACCGACGAAGA 31807 29 100.0 32 ............................. TGCTTGACGTGCCGGACGTGTCTGGCGTCGTG 31746 29 100.0 33 ............................. ACAAAACGCCGCAGGCAATTTATTCGGCGCTGC 31684 29 100.0 33 ............................. GGGTATCTGGGCCGCGTGGCCGAGTTCAACCCG 31622 29 100.0 33 ............................. GTGAGCATCAATCCGACGCGCGATTTGTCGCTC 31560 29 100.0 32 ............................. GTAACCGCAACCATCGACGAGGCGCAGAAAAC 31499 29 100.0 32 ............................. AGCGCCAGCCATACGCCGACGCCGAGGTGTGG 31438 29 100.0 32 ............................. ATTCAGCAACGCCACAAATAGCAACAACCATC 31377 29 100.0 32 ............................. GCGTATCCTCCGGCGACCATGGGCCGGAGTAG 31316 29 100.0 33 ............................. CACCGAAACATTGATCGTCCAGATGCGCCTGGT 31254 29 100.0 33 ............................. TCGCCGATCGCATACGCCTTGTACACGAACGGC 31192 29 100.0 32 ............................. AACACGAACAGACCTAGACCCTCGACGATGAC 31131 29 100.0 33 ............................. ACCGCCTGCAGCAGCTAGACATGTTGCGTGCAA 31069 29 100.0 33 ............................. GCAATTGAACTTGCGGGGTCGATGAAGTCGCTT 31007 29 100.0 33 ............................. TGTTACACGCCCAGCGCGTGCGCTATGCCGACC 30945 29 96.6 32 ............................A GGCGCCGGATAGCCTGCTGCACCTGATCGGAT 30884 29 100.0 33 ............................. TTCTGCACCTGCATGTCGCCAAAGAGCTCGCCG 30822 29 100.0 32 ............................. GCCACTGGGCGCCTGCTCGGGGCCGAAGGGGT 30761 29 100.0 33 ............................. TAGTAATTATGGGTTCGTCGAAGGCATTGACTA 30699 29 100.0 32 ............................. CGGGTGGCCGCGAGCTGCCTGGCCTGGTAAAT 30638 29 96.6 0 ..........................T.. | ========== ====== ====== ====== ============================= ================================= ================== 36 29 99.7 32 GTGTTCCCCGCGTGCGCGGGGATGAACCG # Left flank : GCGACGTATTCCGCCGGACGCGGCTTCTCGAAAAGATCATCCCGACCATCGAGGATGTGCTTGCCGCCGGCGGCATCGCGCCTCCTGAGCCGGCGCCTGACCAAGTGCTGCCGGCCATTGCCGACAAGGAGCCTTTGGGCGATGTTGGTCATCGTGGTTGAGAACGTCCCGCCCCGGCTACGGGGTAGATTGGCCGTCTGGCTGTTGGAAGTGCGTGCTGGCGTCTACGTCGGCAATTACTCGCGCAGGGTACGCGAGGAGATCTGGCGCCACGTCGAAGCCGGCGTCGGCGAGGGCAACGCCGTGATGGTCTGGCGCACGAACAACGAGGCAGGCTTTGAATTCGTGACGATAGGGGCCAACCGGCGCGTGCCCGTCGAACTGGACGGCGTCCAGCTCGTGTCGTTCCTACCGCCAGAGCCGGTGTCGCCAAACGGTGGGTCGGCGGTAGGTTAGCGGGCAGTGTGCAACTTATTTAAAAACATGGGAAAATTTCAAGT # Right flank : GCGAGGCAAGGCAGGCGAGGCAGGCAAGGCAAGGAAGGGATTGTTAATCTCGCAGCAATCGACAGGGTGGCAGGCATGCTTGAATCGATCCTCTCTTATGCCAACGATCACGCTTGGGCGGGCTGGATGTTGGTGGGACTGCTGTTTGCGCCGCCTATACTGATCAGCTTCATCCAGGGGGAGCGTGGCATTTCGCCTATCGGCACGATGTTGGGTTGGTGGGCGCTTGTTTTCATCGTTGCCCTCGTGTTAGCTTAGCCGCCGCGTGCGCTTCGCCCGGCTGAAAAGCCGGGCATGGCTTGAAACGTGCCAAACTCATGATAAGCGGCGTAGGGCTTACCAAATCCCACTGCAGCCTCGAAGGGGTCGGCTCGGTGCGTGCGCGAATTCAGCAGCTCGCCCGTACGGTAAAGGATGCTGCCGCGCCCCTTCTTGGCGCGCGGTGGTTGGTTTCAAGGGCGCCCAGGGTCGGCCTGCTATGCGCGCCATCGGTCAGGAGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTGTGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 23421-24098 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAAUB010000007.1 Tepidiphilus baoligensis strain B18-69 Scaffold7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 23421 37 100.0 36 ..................................... CTTCGTCCCATCCGCAAATTTCCCAGACTACCTTAT 23494 37 100.0 32 ..................................... GCGGCGGATCAGAAGTAGCCCGAGAGGTCCAT 23563 37 100.0 34 ..................................... CGCTTTCCGGGCCTGCTCTTTCAGGTTCTCCAGC 23634 37 100.0 34 ..................................... AACTTTCACCGAGACTTTACCATTATTTTCAGCC 23705 37 100.0 34 ..................................... GGTGTCTGGGTCGCAAGCGGCGATCAGATGGGCG 23776 37 100.0 35 ..................................... GTCGCCTTCTTCTCGGCGTTGAGCACCACCTCGGC 23848 37 100.0 34 ..................................... ACTTTCCTCCCTGTATCTTGGCGATGATCGCGCC 23919 37 100.0 36 ..................................... TTCCAGCAGCGCATCGCTTGCTTTGTAGAGCGCAAC 23992 37 100.0 34 ..................................... CTCCTTTCGTCAAGTTGCTCTCTTGGGCCACGGA 24063 36 86.5 0 ...........................T.-.C.G.T. | ========== ====== ====== ====== ===================================== ==================================== ================== 10 37 98.7 34 CCCCGAAAGATAGCCCCGAGATATAGGGGATTAAGAC # Left flank : ACAAACCCACGCGCTGGATCCTGTGCTATGACATCCGCGACCCCCGGCGCCTGCAGCGCGTACACCGCTATGTCAGCAAACACGGCCTACCTCTGCAATACAGCGCCTTCCTCCTCAAAGGGACCCGCGAAACGATTGAACGCACTCTCGCCGGACTTCGTCCCTATCTCGACGAACGCGTCGACGACGTACGCTGCTACCCTCTGGGCAAAGACACCCGCATCTGGGGCCTAGGGCGCCAATTCACCGACGGTCCCGCCGTCCTCACCGACGAGATCCTCGACCGGCTGATCGTCGAAGACGAAGTCCATGCACCCTGACCATCATCAACCCTGCTTTCGTACGCCCTGCGCACCTTGACACACCTCACACCCCATGCCCATAATGCGTCTCAGGTTCATATCCAGAGCAAGCACCAGACCCTCAGCATGCGCACACCCGAAAAAATTGCGAACCCTCTCGATAACCCATTGATTTTTAAAAATTAGCTTGAAGCAGCA # Right flank : CCCGGACGATTGCATTGATCCGCGACGTCGTGCATTATTCATAGGTCGCGAGACGATGCGTGAGCTGATCGAGGAACTACGGAGGCAAAAGTCATGATGGTTCGACTGCACAAGAACGCCACCACGACCCCTGCGACCCGGCGCTACATCCAAAGCTCGAACCTGCCGGTGAGGCGTCTTGCCCGGGAACTCGGGGTGTCGGAGGACACCATCCGACGCTGGAAGAAACGCACCGACGTGGAAGATCGTCCGCACACGGCGCACCGTCTGCAGACGAACCTGACCCCGTTTCAGGAGGCGGTCGTGGTGGAGCTGCGCAAGACCTTGATGCTGCCTCTGGACGACCTGCTGGCGGTGGTGCGCGAGTTCATCACACCCAACGTCTCGCGCTCGGGGCTGGACCGTTGTCTGCGCCGCCACGGCGTCGGTTCGCTCAAGGCAATGCAGCCCAAAGCCGAAAAGCCGGGGCACAAGCCCTTCAAGTCCTACGAGCCGGGGTT # Questionable array : NO Score: 3.20 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCCGAAAGATAGCCCCGAGATATAGGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [13,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.00,-6.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA //