Array 1 5357-6026 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACIBS010000003.1 Prauserella sediminis strain DSM 45267 Ga0310405_03, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================================== ================== 5357 29 100.0 32 ............................. ACTTCTCGGCCGGGGCTGTCTCCGCCGGTGCC 5418 29 100.0 32 ............................. CCGGTGGTCGTGCACATGCTGCGCGCGTTCCC 5479 29 100.0 32 ............................. GGAGGAACGTGCGGCCGGGCCGCCTCATCCCC 5540 29 100.0 32 ............................. TGGGTGCCGTTCGCCACGGGTAGAAACTCGTC 5601 29 100.0 32 ............................. TCTCACGCGTACGTGAATCAGCGTCTCGCATT 5662 29 96.6 32 .............C............... GCACGGGTTGGCGGCAGCCGCAGTCCGGATCC 5723 29 93.1 32 .............C..............C TCCTCGGAGACCGTGACGATGGTCGCGAGCTT 5784 29 96.6 62 .............C............... TAGAGCAGGTTACCGAGCGCGCCCTGCACCCGGTCCGCCCCCGCACCCGCACCCGCACCCGC 5875 29 86.2 32 AC...........C...A........... AAACGTGTGCTGCTTCGGCGGCTGGTCAGGGT A [5879] 5937 29 100.0 32 ............................. GTGCCGCCACCTTCACGCTCCCGCAACCACTC 5998 29 96.6 0 .........................T... | ========== ====== ====== ====== ============================= ============================================================== ================== 11 29 97.2 35 GTCCGCCCCGCACACGCGGGGATCAGCCG # Left flank : CACCCGCGACAACCACGTCCTCCTGGTCCAATCACTCACCCAACCCGACCCCGAACGCCTCCCCAGCAACTACGGCGCGGTAGCCACCAAACCCATGGACAACCTCGTCGGACAACTCGACACCGGCGTCCGCGTGCGCTACCGCCTCCGCGCAACACCCGTGCGCTACAACGGCCACAAACCCATCATCCAACCAGGCGAGGACCCTCTCGACTGGTGGACACAACGCGCCCCGAGCCGCGGCCTCGAACTCCACACGACCCACATCACCCACACCGGCACCATCACCGGCCGCAAAAACCCCGACGCACCACGGATCGTGCACCGATACGCGCAATACGAAGGAACCGCCACCATCACCGACCGCGACACCGCGCTCCAAGCCATCACCCACGGCATCGGCCGAGGCCGCGCCTACGGCCTAGGACTCCTCTCCGTCGCCCTCCTCAAAACCGAATGAAAAATTCCGAACCAGTCCACAAACTCCCAGGTCAACAAGT # Right flank : GTTCCTGCTGAAGGAAACTGTGACAGTGGTTGGGCGGCCTGCTCGGCCAGCGTGGTCATGTTGGTTTCGTATTCGATGGGGGTCAAACAGACGAGCCTGTTCTGGCGGCGTCGGCGGTGGTAGGTGCGTTCGGTCCAGGTGACGATCGCGATCCGGAGTTCTTCGCGGGTGTCCCATCGGCGGCGGTCGAGCACGCCTGCGTTGCAGGAGGCTGAAGAAGCTCTCCATGGCGGCGTTGTCACCGGCTGAGCCGACCCGGCCCATCGAGCCGCGCATGTGGTGGCGCCACAACGCTTGCTGCAACTTCTTGCTGCGGAATTGGCCTCCGCGATCGCTGTGCAGCGTGCAGCCGGCGACGTGGCCACCATGGCGGGCGACGGCCGATTCCAGCGCGTCCAGGGCGAGCTGGGAGGTCATCCGGTCGGCGATGGAGTAGCCCACGATCCGGTTCGACCACGCGTCCTTGACTGCGCAGAGGTAGAGCGTGCCCTCACTGGTGG # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:-0.15, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGCCCCGCACACGCGGGGATCAGCCG # Alternate repeat : GTCCGCCCCGCACCCGCGGGGATCAGCCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCGCCCCGCCCGCGCGGGGATGAGCCC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //