Array 1 168382-168174 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADVOI010000003.1 Acinetobacter bereziniae strain ACIN00186 ACIN00186_c0003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 168381 28 100.0 32 ............................ AAAGAAAAAAGATGACGCTTCTATCGCTGAAT 168321 28 100.0 32 ............................ ACCATAACTTGAAATAAATTCGCCCTTTAAGT 168261 28 100.0 32 ............................ AGTAGTAGGCAAAATTCCAGTACCATTTTTTA 168201 28 96.4 0 .....................C...... | ========== ====== ====== ====== ============================ ================================ ================== 4 28 99.1 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : TTCCAGAAACAGACTTGGAATCATACATAATTCAAAATTTTATTCTTATAAAAACAATAAGCACTATTTTTGATGAAATTTACGTTATAGCACAAGTTTTATTGAATTTTAACATCATATAAAAATAATCTTTTTTAGCAGTTTATTGAGTTGCAAAGGAAGTATGTATTATCGTTTGCAAGATAAATTAAATTTTAAATATTTGATTGATAAATAAATTATTTTATATGAGGTATGTCGTATGATTCTGAGGAGTGAATCTATTAGAGTTTGTATTATATACTGCTATAACTTGTTGCTGATGAGGCAAAAGGGAACAATTTTGGGAAATATGCTTTTAATAGAATTACGATTATTCAAATATTTTAACCCAATATTTTTTTACTCTTTAACAACTGAATAAAATCAATAAGTTATATTGGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTACCACTTTATTTTTTGATCTAAAATTATA # Right flank : AATTGTTAAACCTCTCTGATGATTTTAAAAATTTATAGTTGTATAAATTGTTTATTTTATAGCAATAAAAAAAGCCCACTTGAATGAAGTGGGCTTTTAGAATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATTGGAGAATCTGCATGCGATTATAAGGATATATCACGAGTGGTCAAGCCTTTGATGTCATCTTTTCTTCATTTTTGACTTGTATGCTTTTTATTTAAACAAATAAGATCAAAATTAAAAAAATGGATTTGAGTGATTGCAAAGCGAGAGCTGACTTGTTAGATTAAAAACATAAAGAGCGTTTAAGTTTGACTTAAACCGTGTGGATTTAACCAACTTGCCAGCACTAAAATGGCTAAATAGGAGACAGCGCGATGACGACGCTAACTATTTCTCAAATTTTTGAAAAATTTTCTTTTTATCAAGAAAACTACCTTTCTATCCTGCA # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: R [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [83.3-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 813-2393 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADVOI010000015.1 Acinetobacter bereziniae strain ACIN00186 ACIN00186_c0015, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 813 28 100.0 32 ............................ CATTTCATAAATTTCGTGCCAGTAGTCCTCAG 873 28 100.0 32 ............................ AATCAGATTAAATCAGGGAGCTAAAAATGGAA 933 28 100.0 32 ............................ TCTTGCGCTCAACATCATTTGCATTGCGGGGC 993 28 100.0 32 ............................ CAACAAAGGGTGGAGTAAAATTAGTATGAATA 1053 28 100.0 32 ............................ ATCACCAGTTCTGACAGTGGTTAAGTAACCCA 1113 28 100.0 32 ............................ CAAGAAACTGGCTTAACAAGAAGAGAGCAAGA 1173 28 100.0 32 ............................ GTAGGTCGTGAGATTTACGAAAGTGTCGCCAA 1233 28 100.0 32 ............................ GCATCGTCATCTAAAAACTCTTGGAAGGCGTC 1293 28 100.0 32 ............................ CCCGAGATATTTATTTGCGCGGTGTTGTCAAT 1353 28 100.0 33 ............................ GCCGAGGATGGCGGTATTATTGAATGGCTCATT 1414 28 100.0 32 ............................ ACGGTCATACATTTCTAACATAAGTGGAAAAA 1474 28 100.0 32 ............................ GTGATTACAGTCCTGACAGTCCTGATGGTGTG 1534 28 100.0 33 ............................ AACCGTATGTAATGAGACCAGTAACGATCTCTT 1595 28 100.0 32 ............................ TGGCGAGTACACCAATCAGATTATTCTTAATC 1655 28 100.0 23 ............................ GTGATTACAGTCCTGATGGTGTG Deletion [1706] 1706 28 100.0 32 ............................ AGTGTGTAGATGGCTATGACCGTGAATTGACT 1766 28 100.0 32 ............................ ATATAATCAGGCTCAAGTGCTAGATTTAGGAA 1826 28 96.4 32 ...........C................ TAATAAAAATAAATTAAAAAAAATTAGGAATA 1886 28 96.4 32 ...........C................ TGCTTGAAGAAGTGGATTTATATCTTGCAAGT 1946 28 96.4 32 ...........C................ TTGCTTATTAGTAACTTTTTGTTTTGGTGCGG 2006 28 96.4 32 ...........C................ ACCACGCCATTTGCCAAAGTTGAAAGTAAAGT 2066 28 92.9 32 ...........C....A........... CCATCCACAATCTCTCTCATCTGCTCAATCGT 2126 28 96.4 32 ...........C................ TGTTTCATGTGGTTCTGGTACTTTTGGAGAAA 2186 28 96.4 32 ...........C................ TAGATTATGTTACTTGCACTGCAACCTATTAA 2246 28 96.4 32 ...........C................ ATTGGGATATGAAATCTGTTGAAAATGATTTA 2306 28 96.4 32 ...........C................ TTGCTAACATTTTGAATTGCCGAAAAGTCTGA 2366 28 82.1 0 ...............AA.CC....A... | ========== ====== ====== ====== ============================ ================================= ================== 27 28 98.0 32 GTTCACTACCGTATAGGTAGCTTAGAAA # Left flank : CTCAGACAGACAATAAATGATGCCAAATTTAGTAAACGGATCTCAGACAGACAATTTAATTCAAACAATTATGTTTGTAACAGGGCAGACGAAAAAGTTTATAAACCAAGCTGAATTATATTGAATACCACAAATCCAAGTTTTATATATAGGTAAAACAGAACGTATTTTTTATCGTGATATTGCTAGATTGGTTGAGCTAAACTTTTTAGATGATCAAGATTGATTGTTGTTGGCGAGTCAGTTTAAATATGATGAGTTTATAAATTGCTTGGCAATATTTTATAAATCTTTTGTAAATGAGGCAAAAGTAGGAAAATTTGGATTGTATAGATTTTAGTGAAAGAGAAGATAATTCTAAAATTTTACCCCAATATTTTTTAACTCTTTAACAACTGAATAAAATCAATAAGTTATAATTGTAAGTAAAAACTTGGGTCATTTGATGATTTTAATGTTTAACTTACTGTTATTATTTTATTTTTTGTTTTAAAATTACA # Right flank : ATATAAACGCCTTAACATCTTAGCTAAATTTAGAAAATTACAAACGATATGGAATAATTTTTATAGTAAATAAAATATGATAATTTAAATGATAATTATTTGCATTATTAATTGCATTTGAATATTTGGTAAAATACAATGTGCAACAATTCTTACACAATCCCTCCGTAATTTGAGTTGCGTATTAACATGAATAAACAATTAACACTTCAAGCACTATCTCTCTCCATACTCTCAGCAATGTCAATTTCAACATATGCAAACGAGACTTCAGAAGACTCTTCCAAGCTTAAAACGATCGTCGTTACAGCAAGTAGTCAGGCGGTCGATGTTAAAGAAGCACCAGCCAGTATTAGTGTGATTACCAGTGAAGATATAGAAAAACAACCGGTGGGTAGTCTTGGCGAGTTATTAAGTAAAGTACCTGGGGTTACTGGTGGAATTAGTCCTAGCAAAGAAGGCTCTAAAATTAAACTACGCGGTTTACCTGACAATTACAC # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGTATAGGTAGCTTAGAAA # Alternate repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: F [matched GTTCACTACCGTATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [86.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //