Array 1 84957-86936 **** Predicted by CRISPRDetect 2.4 *** >NZ_QAHP01000004.1 Lactobacillus acidophilus strain DS5_1A DS5_1A_4_length_165631_cov_54.687017, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== =================================== ================== 84957 27 100.0 34 ........................... TAAGAGAAAACGGTGGTTTCCTCTTATTTTTATG 85018 27 100.0 34 ........................... TAAATCCGGACAACGCTTGCCACCTACGTATTAG 85079 27 100.0 34 ........................... TCATTGAGACACACATTGCGACGACTAAACTCTG 85140 27 100.0 34 ........................... TTTTAATGAAAGGTGCTAGTTTTGTGACACTTTG 85201 27 100.0 34 ........................... TGATTTTCCAGATTCGGCTACTATTTTGGCAGAG 85262 27 100.0 34 ........................... CTTAGGCTATTCCGCACACAATATGTGGCGTGGG 85323 27 96.3 34 ..............A............ TGACTGCAATGCAAGCAAGAGCGGACATAGCAAG 85384 27 100.0 34 ........................... CGTCATAAATTAGCTTTCTGCCCTTTTGCGTCCG 85445 27 100.0 34 ........................... TGCTGCTACGAGCGCTTTTGGTCACATTAAAGAG 85506 27 100.0 34 ........................... TCATTGATGCACCGGTACTTAACTCAAATCAAAG 85567 27 100.0 34 ........................... TGACTACGATATTTTCTTTTAATTATATCTTGGG 85628 27 100.0 34 ........................... CAATATCATCAGCATTTTTCACACCAGAAAATAA 85689 27 100.0 34 ........................... CGATTTGCGTGGCAAATGAATGGTTGATCTTGAA 85750 27 100.0 34 ........................... TATTCTTTTTCACTATCAAAATCAAATATTTCTA 85811 27 100.0 34 ........................... CACAAAAAAGCCACCTAGAAGATAAAATTCTTCA 85872 27 100.0 35 ........................... CCTTAACTAGTGCAAATTTAATATTTGGATAGCTA 85934 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 85995 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 86056 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 86117 27 100.0 34 ........................... CTTTGGCCATCTTCGGTCTTAAACTTAGCTAAAA 86178 27 100.0 34 ........................... CGGGTAAACAAGTCAGAGTTACTCGCAGCAAATA 86239 27 100.0 34 ........................... TTAGGCGAAACCCCGAGAGCAATTTCAAGCACGA 86300 27 100.0 34 ........................... TAAAACGTTGAAGCTTATTGTCCGCTTTAACGTA 86361 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 86422 27 100.0 34 ........................... TGGGTACCGAGGGTGGCAATATCTTCCTTATTTA 86483 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 86544 27 100.0 34 ........................... CGGAATGTATGATAAAAATTGGCTATTTGCCTAA 86605 27 100.0 34 ........................... TATTGATGCAACACCTAGCGCAAGTCAACCTGGA 86666 27 100.0 34 ........................... CAGGGTGGTTTTAAGTACGAGATTGACTACGATA 86727 27 100.0 34 ........................... TGGCGAGAAGCTTATGAAGATCCTAGGAAAAGGA 86788 27 100.0 34 ........................... TATATGCGACTTATTTCTTACGATGAGATTCCAA 86849 27 92.6 34 ...........A.A............. TCGATGGTAACTCTGTAGCTTTTAGAGCCTTTTA 86910 27 74.1 0 ....T..T.T.A.A........A.C.. | ========== ====== ====== ====== =========================== =================================== ================== 33 27 98.9 34 TTTTCTCCACGTATGTGGAGGTGATCC # Left flank : CGTGGTTGTCTGCAGCAAAGGCTATCCAACGCACCCAGCACCTAATGTTAAGATCGGCAAGCTGCCTGAAGGTGCTAATACCTATATCGATTACGCCAATGTTAAAGGTGATTTGGAAAACTTGACGGGTGATGGTGGCCGCTTGTTCATGGTGATTTCGGAAGCTGACAATTTAGTTCAGGCACAAGACAATGTTTATTCTTATTTAAGTAAGCTTGATCTGCTGGATTGCTTCTACCGGCATGATATTGGTAATCGTGCTTTGGGAGATTTTAATATTATATAATGTCTTAACTTAATGACATTGATAAGGCTACCCATATTTTGTTTATTTGTAATCCTGTGAATATAATAGCAATTTAAAATTATTATATGAGCTAGATATATGTAGAAGAATATTTGATATAATTGTGTCGATGATTTGGTTGGGGAAATGCAAACTAAAGAAATTTTGCTTTTTAGTAAATTTAAAATAGCTTAACGATGGGATTCCTTTAGTG # Right flank : CTGAAGCACAATATTTTTAAAATAATTGGGCAAGATTTTCTCCAAAAAAGTGGAGCTACATTAACGCAGTGAAGGAAAGATCACAAGAAAAAGTCCCTAATCAGGGCTTTTTTCTTTTCCAAAAACAACATGCTGAAATAGTGTACCGTAAACTGGTAAAATAGATAAGTAAACATAGATCAATTAATAAATAAGGGGGAATAAAATGGCAGATAAAAAATTACTTCTAATAGATGGAAATTCAGTTGCTTTTCGTGCCTTTTATGCTTTGTATCGGCAACTTGATCGCTTTACTAGTCCAGATGGGTTGCACACTAATGCGATTTTTACCTTTAAAAACATGTTGGATGCCATTCTTAAACAAGTAGATCCAACTAATATCTTAGTTGCTTTTGATGCGGGCAAAGTTACTTTCAGAACTGCCATGTATAAAGACTACAAGGGCGGCAGACAGAAGACACCTAGTGAATTGCTTGAACAAATGCCTGTTATTCGTGAAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTCTCCACGTATGTGGAGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.20,-6.10] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //