Array 1 3937-4625 **** Predicted by CRISPRDetect 2.4 *** >NZ_MVDO01000194.1 Wohlfahrtiimonas larvae strain kbl006 contig194, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 3937 28 100.0 32 ............................ GAATCATGTTTGGCAGGTGGATGCATCAGTTG 3997 28 100.0 32 ............................ ATGAGTCTGAAAGAGCCAGCTAGCGGTGCTAC 4057 28 100.0 32 ............................ ATTATTTTTTGATGAAATAGCAATAAAAGACA 4117 28 100.0 32 ............................ ATAACTAAAAATAATAGAGCTATTTGCATCTG 4177 28 100.0 32 ............................ AAATAATGCACAGTCAGTTGGTGGTTTGCATG 4237 28 100.0 32 ............................ GTACTAACTAGTAATGAAGAATACAAAGAGCC 4297 28 100.0 32 ............................ AAAATTCAGTAAATCCTGAGCCAACACCAACG 4357 28 100.0 32 ............................ GATATGATTGTGAACAATCGCTTCAATTCGCT 4417 28 100.0 32 ............................ TTTGTGTAATAATTGTTCGGTATATCGTACAC 4477 28 100.0 32 ............................ AAACATGCATTCGAGCTGGTGCTGATGCTTCG 4537 28 100.0 32 ............................ ACCTGAAGATAAACCAACTGAACCTACTGATC 4597 28 89.3 0 ....................A.G.C... | T [4617] ========== ====== ====== ====== ============================ ================================ ================== 12 28 99.1 32 GTTAACTGCCGAATAGGCAGCTTAGAAA # Left flank : ACCAAAGACTAGTACGGAGATCACCAACATGATTTTACGGCCGAGTTTATCAGCCAGTGGCCCAAAGCCAATTGCACCAATCGCAATACCAAATAAGCCTGCGCTCATTGCAGTTGCTAAATCAGGCTTTTGAATGCCCCATTCTTGTATTAAGCTAGGCGCAATGTAGCCAATGGCGACCGTATCATAGCCATCTAGCAATGCAACTAGAAAGCAAACGGCAAAAATCATCCATTGAAACTTTGAAAATTTGTTGGTATCTATAAATTCTTGAAAATTTTTATTGGGTTTAATGGATCCCACATTATATCTCCATGATAAAGATTACATGATTATTAAGTTGATATGGTAACTTACCAAAATTTTAATGAATAATTTTAGAATCTTAATAAAATTAAATAAAATCAATTGGTTATATCTATGGTAAAAATGATTGGTATTAAAGTGTAAAATATATGGAAATATTTGTATTTACAAGTTTTTTTATACTAAAATGCACT # Right flank : AAATTATTGACTTTTATTTCCGATCAGTGTCTACTAAACGAATGATTAACTAATAGACTTTATTTGAAATGACACAAACAATGATGAATACAACATGGTGGCAAGAACTCCCTACTTCGGGCGGTTCGGCTGTGTCTGTTTTTCAATAAAGTTTCAAGAAGAACAAATCAAAACCCGCCTAATGGCGGGTTTTTTTATATCTAAATTATGTTTGCACAAAGGAAAATTTATGATCGATGCATTTTCAAGTTTACAAACGGTGCTGAATTACCAAGATAACCCTGCAGAGTTGTTTCATCATTATTGCGAAAATAAAGCCAATACATTGCTACTAGAATCAGCAGATGTGAATAGTAAAGAGAATCTAAAAAGCTTATTGGTGATCGAATCTGCCGTTAAAATTACAGCCAATAACCACTTGGTAACTTATAAAGCACTTACAGAAAATGGACTAAATTTATTGCCCATCATTCAGAAAACACTATCATCCATGAAGGTAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAACTGCCGAATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGAATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 31-179 **** Predicted by CRISPRDetect 2.4 *** >NZ_MVDO01000010.1 Wohlfahrtiimonas larvae strain kbl006 contig10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 31 28 100.0 32 ............................ AAATTCATCAAAGTGATAAGAATCATTTTCAT 91 28 100.0 33 ............................ AAAAGCCGTATCACTAGCAACTTACGATCAAGT 152 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 3 28 100.0 33 GTTCACTGCCGAATAGGCAGCTTAGAAA # Left flank : GTGAGATAGCGATCATTGTCGAGTTCACACG # Right flank : AACTGTAGAGAGATTATCTAGCTTTTCTGTATTCTCTCGATCAATGCTAATATCTTTATCATAATGAATCACTGGATAATGGCATGAGAATATTACACACAGCAGATTGGCATTTGGGGCGAGCGCTTTATCATAAAAAGCGTTATGCAGAATTTGAAGCTTTCTTGAATTGGCTGGCGGATGCCATTACGGAGCATGCTGTGGATGCATTATTAATTGCAGGTGATGTATTTGATACAAGTACGCCAAGCAACCGCGCGCAATCTCTTTATTATGAATTTTTGCATCGTGTGGCGAAAGGTAGTTGCCGCCATATTGTGATCATTGGTGGAAATCATGATTCACCTTCATTTTTAAATGCGCCAAAAGCACTGTTACATACGCTGAATGTTCATGTTGTGGGCGCAATGCCCGATGATCTACAAGAAGAAGTAATCACGCTTTATCATAATGATCAGCCTGAAGCGATCATTTGTGCTGTGCCATATTTGCGGGATAAA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGAATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.06%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGAATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1163-1791 **** Predicted by CRISPRDetect 2.4 *** >NZ_MVDO01000009.1 Wohlfahrtiimonas larvae strain kbl006 contig9, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1163 28 100.0 32 ............................ AGCTAGCGGTGCTACTCAGAGCCTTAATATAT 1223 28 100.0 32 ............................ ACATTGGCTTTTAATTTCTTGTGAATTTCTGC 1283 28 100.0 32 ............................ AGAAAGGTTTTACTGATGCTATTAATGCACTA 1343 28 100.0 32 ............................ ACTACTTTTGACAGCGATATTGCCATTCATTC 1403 28 100.0 32 ............................ TGCAATATCAGTGAGGCCTTTGGCATTAGTAG 1463 28 100.0 32 ............................ AAGCAATGAAACGCTGCCATAGTGATGGTTTG 1523 28 100.0 32 ............................ AATCCATTCCTGTGCAACTCACAGCGCTCGAA 1583 28 100.0 32 ............................ TAGTGAGATAGCGATCATTGTCGAGTTCACAC 1643 28 100.0 32 ............................ AAATTCATCAAAGTGATAAGAATCATTTTCAT 1703 28 96.4 33 ............C............... AAAAGCCGTATCACTAGCAACTTACGATCAAGT 1764 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 11 28 99.7 32 GTTCACTGCCGAATAGGCAGCTTAGAAA # Left flank : TTAGATTTATCTAAATGGTTGTCTCGTTTGATGGATTATGTACATATTCAGTCTATTAAGCCTGTACCTGATAAAGTTGATGGTTATGCGGTTTATCAGCGCCATCAGGTTAAAGGAAATCCTCAAAGATTAGCTCGTCGTTATGCGAAAAGGCATGATGTAAGCTACGAAGAAGCTTTGAAAATTTATCAGTCAATGGATCTGGAAATGACAAACTTGCCATATGTTCAAATGAAAAGTTTATCTAAAAATCAAATGTTTAAATTGTTTATTGAGAAGACAGTTGTTGATTCTGAGAGTACAGAAGCAAGGTTTACAACATATGGCCTAAATGCTAAGGATTCATTTTTTACTGTACCTGAGTTTTAACCAATAATTTTTACTCTTTAAAAATTTGAAATAAAATCAGTTGTTTAAATGCTTGGTGAAAATCATTGGTATTTTGATTAAAATGATCATCTACCTTTGATTTTCACTTATTTTTATGTGTAAAATTTACT # Right flank : ACTGTAGAGAGATTATCTAGCTTTTCTGTATTCTCTCGATCAATGCTAATA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGAATAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGAATAGGCAGCTTAGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGAATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //