Array 1 5028-1034 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNUY010000033.1 Lactobacillus delbrueckii subsp. lactis strain FAM 21755 FAM21755-i2-1_scf33, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 5027 28 100.0 33 ............................ CGGCTCTCTGCATAATCTGCAAGCAAGGCTGAT 4966 28 100.0 33 ............................ TATTTCAGTATTATGAGGCGGACCGTAAAGATA 4905 28 100.0 33 ............................ TAAAAAAGGCGAAAAATACGAAAAATTAATCTG 4844 28 100.0 33 ............................ CCCTCAGAACCGGGTTTTTGCCCACGTTGGTGG 4783 28 100.0 33 ............................ CGTCAACCAAGATCCCGATTCTCGGCAAGACGG 4722 28 100.0 33 ............................ TGACATTGGCCCCCAAGAGACTGTAATCTTACG 4661 28 100.0 33 ............................ CAACTACAATCGACTCCTACCACATTCAAACGG 4600 28 100.0 33 ............................ TGGATAGATGGCTTTGAGGGCAAATACGAAGTC 4539 28 100.0 33 ............................ TGTTTGGCTGTAGTCCTTAAGCGACTGCATCCG 4478 28 100.0 33 ............................ TTGGGCTTTAACGTCATCGCTATTTGGCGTGTA 4417 28 100.0 33 ............................ TATCACCGGACCATCTTGCTTGGCCGTCGGCGT 4356 28 100.0 33 ............................ CGAGTTAACCACGGGCGTGTATGAACTGGACTA 4295 28 100.0 33 ............................ TCCGCGTCACCGTCTGAAACTCGCCGAACTGGA 4234 28 100.0 33 ............................ GACCACCTTGCTGATGAAGCTGGCACCGCCTGG 4173 28 100.0 33 ............................ CTACTGGCAGTTAGCTGTTGATGATTTCAACAA 4112 28 100.0 33 ............................ CGACCACGTGGTCGATGACATTGCCTTGTATTG 4051 28 100.0 33 ............................ CGGCGTATCAATTACGACAAAAGAAGACTTTGG 3990 28 100.0 33 ............................ TTATCACTGTTTACGTAGTCTTTCCGGTAGCGG 3929 28 100.0 33 ............................ TAATCATCGGCATAACATCAAAATCCAGGAAAG 3868 28 100.0 33 ............................ CACAGAAGAAAACAACTTCCGGGAAAGAGAACT 3807 28 100.0 33 ............................ TAGTCGCCATCCAGCGTGTGGAAGAGGTGCGGG 3746 28 100.0 33 ............................ CGGCAACCAGCTGGTCGTACAAAGCGGCCGTGA 3685 28 100.0 33 ............................ CGGTTGAAGCCCTTCTTTTCCAGGGCTTCGATA 3624 28 100.0 33 ............................ TCCGATTGTACAAATTGCCAATATAGAAAAGAT 3563 28 100.0 33 ............................ TCGGAAAAGATTTGTGGATCCCAGACGAGTTTG 3502 28 100.0 33 ............................ CTGCCATAGCGCGTGGGGCTGGTCTTCGCCATG 3441 28 100.0 33 ............................ CAATGTTGCCCGTGATGTCACGCGTACATCCAG 3380 28 100.0 33 ............................ CGTCACTCCGGGCTTCACACTGAGTGCCGATAA 3319 28 100.0 33 ............................ TGAATACCACTTTCTAGGAAAGAACTTGGTAGT 3258 28 100.0 33 ............................ TGTCCAATTGCTGATCTGCTTTAGCCCAAAAAG 3197 28 100.0 33 ............................ TCGTAAAGCTGACCGAGGGCACGGACTACGTAA 3136 28 100.0 33 ............................ TCCACGCTGTTACGCCGCTCTCATATAGTCTAA 3075 28 100.0 33 ............................ TTGGAATCGCCAACCTTGACCACCACCTGGTCG 3014 28 100.0 33 ............................ TTTGCTCCAGCTGAACAGCCCAAGGTGGCAGAA 2953 28 100.0 33 ............................ TGTGCTGATCTGTTTCTGTGCATTCGTGATGCT 2892 28 100.0 33 ............................ TCGCCGTACGCATGAGGGAAGCCCCAGAATAAA 2831 28 100.0 33 ............................ TGAGAACACGCAAGACAAGTTAACCACCGCTGA 2770 28 100.0 33 ............................ TGTGGAGATACTTCCCACGGTTTCGTCCTGAGT 2709 28 100.0 33 ............................ CTTCTCTATGCTCTGAGTCCCACTTATCACGGG 2648 28 100.0 33 ............................ TGCAGGTCTGACGCAAGAAAAAGCAGCTAGACA 2587 28 100.0 33 ............................ AGCCTTTCCAATGCCAATTGAAGTATTTGGAAG 2526 28 100.0 33 ............................ TCAATTCTGAGCCGTTATAGTGCATGCCATAGG 2465 28 100.0 33 ............................ CGAACAACTAATCCATCTTATGGAAGCCCCTAA 2404 28 100.0 33 ............................ TTTCGCCAATCTCTTTTATAGTAGCGTGAAGCT 2343 28 100.0 34 ............................ TATACAAGCCGTTCACGCTTTGTATGATCGTATA 2281 28 100.0 33 ............................ CACCCCCCAGTCAAAATTCAGTCCCAAAAAATC 2220 28 100.0 33 ............................ CGGGAATGGACGCAGATCGATCGGCAAATACCG 2159 28 100.0 33 ............................ CGTTGCTGGCAACCAGAAGTTAATCAGAGCGAG 2098 28 100.0 33 ............................ CAAAGGTTGTCGGTGACCTACTGGACGCCGCTG 2037 28 100.0 33 ............................ TCTCTGGAAAAATCATACGATCATCACCGACCA 1976 28 100.0 33 ............................ TGGTTTGTAGAAACGCGGGCTGATTTGTGTTAC 1915 28 100.0 33 ............................ TTGCCAACTACCAGACCTACGATCAGTGGGCAG 1854 28 100.0 33 ............................ TCCAAGGAGAACCTGGCGCTTGTTCAGCAGATC 1793 28 100.0 33 ............................ TGTCAGCGATTGAGACGCCGAATCGGAATGCCG 1732 28 100.0 33 ............................ CCGTGCAAAATGGTAGGCGTGCGTGTACAAATG 1671 28 100.0 33 ............................ TCAATGCGTGCACATCAAATTTAAAAGGAACTG 1610 28 100.0 33 ............................ TTTTCATTAAATCTTGCTCGCAAAAGGTTGGTA 1549 28 100.0 33 ............................ CACGGCTGGTGCAGGCGACCAGTCTGGCGTTGA 1488 28 100.0 33 ............................ TCCTTGAAATGCCTTTTCCATTTCCATCATCCA 1427 28 100.0 33 ............................ CTTAGTTCTAGGCTTATCCTTTACTTGGCTAGT 1366 28 100.0 33 ............................ ACGTTGAGACTTGGCTTAGAGAACATGGCCACA 1305 28 100.0 33 ............................ TGGATCAGCATCCCCTCCAGCGAATGGATCAGC 1244 28 100.0 33 ............................ TTGAGAATGTAAGCAATAGAAAAGCCCACGGGG 1183 28 100.0 33 ............................ CCGGCTCCTTGTTTCAACCGCTAGCGCCTACTA 1122 28 100.0 33 ............................ TAGCTCGTCTTGAACAGCATTTAGTAAATCGCG 1061 28 85.7 0 ............T.T.......CA.... | ========== ====== ====== ====== ============================ ================================== ================== 66 28 99.8 33 GTATTCCCCACGCAAGTGGGGGTGATCC # Left flank : GGATTGAATACGGAAAGTGATCAGATTTTGTCTATTGGCGCGGTGAAACACGATGGTACAGAATTCTACCGACTGATCAAGCAAGATATTGATGTGCCAAAACAGATAGTGGAGCTGACCGGGATAACTCCAGCAATGCTGGATAAGGAAGGCGTTTCACTGCAAGATGTTTTGGGAGAACTAACTGACTTTGTTGGGGATGTGCCAATCGTTGGGTATAATTTTAGATTCGATTCTGCATTTTTGAATAGGGAATATCGGAAATGCGGGATGCAAGAATTAAAAAATGAGATCAAGGATTTGCTACCAGTTGTAAAAAGAAAAGAAAAATTTCTGGACAACTATAAGCTACAGACTGTATTATCAAACTACGGGATCGAAAACAAGGTGCCGCATAATGCTGTGTCTGACGCAAGGGCTACGAAGGAGCTGGCGATGAAACTAATCAAAAATCGCATTTTGGTGATTTGAGAATGGCGTCGCTAAAGGGATCCATTACT # Right flank : GTTCTTTATGTTATTGTGCTTTTCGTACTGTGTATTTTCCATACATATGCCGCGATGATCATAAGTTTCAGTTAAAGCACAAGCAAATTTCAAGGATCTTTGGTAGAGTAGAGAGGTAATAGAGAAGGAGTGAGGAACAAACATGAGCATTTACGGTAAGTACGCCGATTATCTTCCACAGATCCTGGATTCTGTTTTGCAGCAAATCCAAGGCATCGGTCAGGAGTATAGTGCAAAACACGGGCAAAAGCTATACGAGTACCTGAAAGGTCGCGTCAAAGGCGAAGAAAGCATGACGCAAAAGTGCGAAAGAAAAGGTTTACCGCTGACGCCAGAGTCTGCATTGATTGAAAACCGGGATGCGATTGGCCTCAGAATCGTCTGCAACTTTATTGACGATATCTACACTTGCGTTGACTTGTTGAAGAAGCAGGACAACTTCAAGATAATTAATGAAAAAGACTACATTACCGATGCCAAGCCAAACGGCTACCGGTCAT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCAAGTGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGCAAGTGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //