Array 1 333772-335851 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCHG010000002.1 Streptococcus gordonii strain DFI.4.104 HFEHAIPB_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 333772 32 100.0 34 ................................ AGAGTTGAAGCGCTTGGGCTTGAAAAAGCAAAGA 333838 32 100.0 34 ................................ ACGCTTGAACTTCGCAACAATCGGAGACGCTATT 333904 32 100.0 35 ................................ CCTAAACTAAATGAAACACTAATTGTTGAAACAGT 333971 32 100.0 34 ................................ AGATATTGATAATTATGAAAACGGTAACTTTATC 334037 32 100.0 34 ................................ TTATGAACCTTGGTATGATGACCGCAAGGACTAC 334103 32 100.0 36 ................................ ATGCTGAGTATGTAGATAGCATGGTTCAAGAGCTTT 334171 32 100.0 34 ................................ AAAGGAAAACATAGCTACAAAATTACAACCAAAC 334237 32 100.0 36 ................................ CTTTGACTGGCACGCCTTCGATCTCACCATAGACAA 334305 32 100.0 35 ................................ ATCATGGCTGATGTGTTATCCACAACTGCTTGGTT 334372 32 100.0 34 ................................ TTTTTCTTTATCCATAATCTCCACTCTACCTAAA 334438 32 100.0 34 ................................ TGTATCATTTTTAAAAATAAACCGATTGTGTTTT 334504 32 100.0 34 ................................ TCCTTTTTATAATTCAATGTCATATAGGCCAGGG 334570 32 100.0 36 ................................ TTTAAACGCATAAGCCGTGTAATGCTCTTTAAAAAA 334638 32 100.0 35 ................................ TAGAGAGGGCTACTATTTTTTTACTGACTGAGATT 334705 32 100.0 34 ................................ TCCTGCTTCCCCGGCAGTTCGGTAATTTTTAAGC 334771 32 100.0 34 ................................ CGTAAATTGTATCATTTTGTCGTTTGTAGGATAT 334837 32 100.0 32 ................................ TTGTCATTTATCAGTACGGCTACGGTTGCTGA 334901 32 100.0 35 ................................ TTGCGCGGTATTAATGCTGCAGGAGTTGAATTAGC 334968 32 100.0 35 ................................ AAGAGCTTCAACCATTGCTTGAATCATTTTCTTAG 335035 32 100.0 35 ................................ ACGGCTTTGTTGACTTTTTCGGTAATGATAGCGTC 335102 32 100.0 35 ................................ AAAACGAAGTTTTAGGCTCAGGATTTGACATTGAC 335169 32 100.0 35 ................................ ATTGCATGGTAGCGGATAATAAAGGCTTTTCCCTC 335236 32 100.0 34 ................................ TGAACTGACTGATTTTAAGCAGAAAGTGCAGACT 335302 32 100.0 34 ................................ CTTGCAAAAGAGCTACTAGATCGGCCTTCTTAGC 335368 32 100.0 33 ................................ TGTTACATTTAAAAACGGCGTCGTTCAGATGGA 335433 32 100.0 34 ................................ AGGTATTTGGAACGGTATCAGCTCAACTGCATCT 335499 32 100.0 36 ................................ CTTGGCCAAAACCAAGGCGGAGAAGCTGGGCCTAAT 335567 32 100.0 35 ................................ ACCAACTGTTTTTGCTTTTAGAAATCCTTTAAAAC 335634 32 100.0 33 ................................ TGTATCATTTCCAAGTGAAGCCATAAGAAAAGC 335699 32 87.5 23 ...........................TT.TA GGGCTTTGTTGCGTTGCCCTTGT Deletion [335754] 335754 32 100.0 34 ................................ TTCTGCCATAGTAGGCCTCCTGCATTTGATATTC 335820 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 32 32 99.6 34 GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT # Left flank : CCAAGACAATCCGTGGAGAATTGGAATCCTATCCACCATTTTTGATATAGGAGCTAGTTAATGATGGTATTAGTAACATATGATGTGAATACTGAAACTGCGCAAGGCAGGAAAAGACTACGTCATGTGTCAAAATTATGTGTTGATTATGGGCAACGCGTTCAGAATTCAGTTTTTGAATGCTCAGTAACTCCTGCAGAATTTGTAGAAATAAAAGCTAAGCTTTTGAGTATAATTGACACTGAGTCTGACAGTATTCGTTTTTATTTGCTAGGAAAAAACTGGCAAAATCGCCTAGAAACAATTGGACGTGATACAAGTTATGATCCTGATATAGGCGTACTACTCCTTTAAATTACTTAGTGCGAATAGTGGTTACTCATAAAAAAGTAGGGCATTCGCGCGAAAAACAAACAAAAATAAGGTAAAAATTCAAAAATATAGAGGAGTTATCTCTCCTTGAAAAATAATTTTTACCTAAAACAGTGCAATTACGCGCT # Right flank : TTCAATGATTGATCGTGTAACTCGTCTATGCTATAAGGTAGCTTCCTTCATTTTGAAAATTTTCATGAACCCAAGATACTTATTTATTATTTATATAATATATTTAGTTGTTCTCTTTCATATCTATCCAAAAAAAAACCACCTATTAGGTGGTTTTTTTCAGTATCTATCACTGCTTACTAGAAGAACTTGAGCTGCTTGAGCTGTCGCTGCTGGATTCAGAACTGTCTTCTGAGGAGCTGGTGCTTTCAAATTGTTCTGGGTGAAGCGCTCGATAGCTTGGAGCATCAAAGAGATCAATAGTCGATTCGCCCTTGCGTTGGCTATAGAGACTGGTTGATTGGTCTCCTTTTTCTTCCTCGATTTTCTTCAATGCTTTGAAAGAGTGGTTGTAGGAGTATTTCTTGACATCTACCTTGCCCAAGTCATTACCCTTGTAGAAGCGAATCAAGTCACCGGTTTGAATAGCGTCACTAATCTTCAGCTGGGTATTGGCAGCA # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCTTCACGGGAGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.40,-5.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //