Array 1 60811-60322 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJHKK010000004.1 Clostridium botulinum strain SCPM-O-B-8707 NODE_4_length_63731_cov_45.195428, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 60810 30 100.0 37 .............................. ATATATTTTTCACCCAAATTCTCAGATTCAGCTTGTA 60743 30 100.0 35 .............................. TCTATCTCTTTTCGTGTGTCTTTAAATTTTATATC 60678 30 100.0 37 .............................. CATAGATAATATGATTTACCTTCTTTTATTTCTCCAT 60611 30 100.0 35 .............................. TAAGGTCTATGCGTTTCTATTGTTGAACAATTTAA 60546 30 100.0 35 .............................. GAAGAAGAAAGTGAAAAAATTATTTATGATATGGA 60481 30 100.0 35 .............................. TGATCTACCGTCATTTGCATTTTAGAAACTAATCC 60416 30 100.0 35 .............................. ACAACCTAGCATAATGGGCTTTGGTGGGTTTGATG 60351 30 93.3 0 ............................GC | ========== ====== ====== ====== ============================== ===================================== ================== 8 30 99.2 36 GTTGAACCTTAACATAGGATGTATTTAAAT # Left flank : TTCTGTTTGAAATTGAGTATAAGGTTGAACAGTAACATAAGATGTATTTAAATGGAATATTAAACTGAATCCAATTATCTAAATTTGAGTTGAACAGTAACATAAGATGTATTTAAATCCAATATTATTCGGTGAGGATGTTATTTTAAATGAGTTGAACAGTAACATAAGATGTATTTAAATGAAGAAATGAAACAAGCGGCCATAAGTGCTTTAGGTTGAACAATAACATGAGATGTATTTAAGCAGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTACTTCTTGGAGGAGAGGAGTAGGAGTTTCATTAATTGAATTTTTCCAGGTACAATAAATTTGGAAACCTATTCTAGCCGTTGATATATAAGGCTTAGAATAGGTTTTTATCATGTGCTTATGAAAAAACAAAATCACTTGGAAAACTTTTTCTAAAACCTTGTAAAATCAATGGGTGTATGATATTCTTAAAAATAAGGAATGGCTATTTTGCTATG # Right flank : AGAGAACCCAAATCTATGATTTGGTGTGAATCGCTTACTCTTTAGAGAATGGCATAGGGATTTTTATAAAACTAAACTATGCATTGTGATAACTTCTATATAAATTATTAGATAAAGGGGGATTTTATGAAAAATAAAGTTACTAATAATTTAAATTTTGTTGCAGCAATATTGCTTGGAATTGTGGCTATGTTAAATTTTTTTCAGCATAAAACATTGCTGGGGATTACATATATCTGTTCAGCAATATGTTTTTGTACACTTGAATTTTCAAAAAAGAAAAATGCAAATCATAAATAAATTTAATTTTAAAAACCTGTCTATTTTTAGGTCAGGTTTTTAGTATTTAAAGGGATTAGATAAAATAATTTTTTGTAGTTATGCAGATATTGTATATTATTTTATATTTTTGAAGGATTATCCATAACTCTGTAGAAGAATATTTGTGTAGGAAATATATTATAAAAATATGGAGGGAGTATTGTGGATAAATTTCGTAA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 2 61748-61064 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJHKK010000004.1 Clostridium botulinum strain SCPM-O-B-8707 NODE_4_length_63731_cov_45.195428, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 61747 30 100.0 35 .............................. TGCTTTACTATTAATCCAAATTTTTCACTTGCTTT 61682 30 100.0 36 .............................. TGTTTTGATAAAGGTTTTAATAACTTTTCTTCTAAG 61616 30 100.0 35 .............................. ATTAATTTAAAACATAAAAACTAAGCAAATAATCT 61551 30 100.0 36 .............................. CAGTTTATATTAAGAATTTTGTCTTTAGGAATAACA 61485 30 100.0 37 .............................. TATCAGTTCCTGATGTTTGCTCTGCATATTCTACAAA 61418 30 100.0 34 .............................. CAAAGGTAGGAAGGCCTTTAAAATATGAAACACC 61354 30 100.0 37 .............................. TAACTAATAGTATCTTCTGTTTGAAATTGAGTATAAG 61287 30 100.0 35 .............................. GGAATATTAAACTGAATCCAATTATCTAAATTTGA 61222 30 100.0 35 .............................. CCAATATTATTCGGTGAGGATGTTATTTTAAATGA 61157 30 100.0 34 .............................. GAAGAAATGAAACAAGCGGCCATAAGTGCTTTAG 61093 30 86.7 0 ........A......G............GC | ========== ====== ====== ====== ============================== ===================================== ================== 11 30 98.8 36 GTTGAACAGTAACATAAGATGTATTTAAAT # Left flank : ATAGGAAGTTATCGTTTGTTTGGAATAAAGTTTACAAGTTGAACATTAACATGAGATGTATTTAAGTAGCGAACTGTGAGTCACTTACTCCTTGGAGGCAACGAGAAGGAGTTTCATTGAGTGATTAGACATTTAGTATTTTAAGTTTAGGCATGATATGAGCCCAATAAAATAATAATTTAAAAAATGAAAAATATGATTTATAAATTTATTAGCTTAAAGCAGCTATTCTTAATGAAATGGATGCTTTTTTTAATTGAGCTTTGTATAAATACAAATAAATCTAATTTTAGTGATTAATCAGTCTGATTATAAGTAAAATGTTTTTCCAACCACATTTAATTTTAAAATATATCTTAACCCTTGAAATATAAGGCTTAAGGTATGCTTTATTAAAATTTTATAAAAAATGAGAAACGGTTGGGAAATTTTCTTTAAAACCTTGTAAAATCAATAGTCATATGCTATTCTTAAAATTAAGGAATGGCTATTTTACTATG # Right flank : AGAGAACTTAAATTTGTGATTTGGTGTGAGTTGCTTACTTCTTGGAGGAGAGGAGTAGGAGTTTCATTAATTGAATTTTTCCAGGTACAATAAATTTGGAAACCTATTCTAGCCGTTGATATATAAGGCTTAGAATAGGTTTTTATCATGTGCTTATGAAAAAACAAAATCACTTGGAAAACTTTTTCTAAAACCTTGTAAAATCAATGGGTGTATGATATTCTTAAAAATAAGGAATGGCTATTTTGCTATGGTTGAACCTTAACATAGGATGTATTTAAATATATATTTTTCACCCAAATTCTCAGATTCAGCTTGTAGTTGAACCTTAACATAGGATGTATTTAAATTCTATCTCTTTTCGTGTGTCTTTAAATTTTATATCGTTGAACCTTAACATAGGATGTATTTAAATCATAGATAATATGATTTACCTTCTTTTATTTCTCCATGTTGAACCTTAACATAGGATGTATTTAAATTAAGGTCTATGCGTTTCT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAGTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 1 11375-10860 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJHKK010000062.1 Clostridium botulinum strain SCPM-O-B-8707 NODE_62_length_16845_cov_26.049946, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================================== ================== 11374 30 100.0 37 .............................. AAATTAAACTTCTAATCTCAACTTCTATAATTATTAT 11307 30 100.0 36 .............................. TTTAAATTTGTACCTACTTGTCCATTGGTGTAAGGT 11241 30 100.0 37 .............................. TGTTGCATCTAAAGGTGTTGTAACTGCAAATGTTAAG 11174 30 100.0 34 .............................. TCCGCAATAGAAATGTTGGAAGAAATGGGCATAA 11110 30 100.0 36 .............................. AGATTTAGCCCTAATATGACTAGAACACCAGAAGGT 11044 30 96.7 37 ................G............. ATAGAATAGTACACCAATATTTCGATGATTGGGATAA 10977 30 93.3 58 ......C............G.......... TGTATTAAAAAAGATAAAATATTTAGCAAAAACATGGTGGTATACTTGAAGTGCTAGA 10889 30 73.3 0 ...T.TG.A..TA..C............G. | ========== ====== ====== ====== ============================== ========================================================== ================== 8 30 95.4 39 GTTGAATAGTAACATGAGATGTATTTAAAT # Left flank : GCTTGGGACAGGTTTGTTTTAGATATTTATTAAAAAACGTAATCACTTAGAAAAATTTTTTTCAAACCTTGTAAAATCAATGGGTGTATGATATTCTCAAAAATAAGAAATGGCTATTTTGCTATGGTTGAACAGTAACATAGGATGTATTTAAATTACCTGAAGCTTCTGTATAATTTCTTTTCACTACGTTGAACAATAACATGAGATGTATTTAAGCAGGGAACCCAAATCTCTAATTTGTCGTGAGTCGCTTACTCCTTCGAAAATGATATAAGGAGTTTCATTAATGAGCATAATGTATATCTTATATTTAATTAAATTTTTCCAAGTGAATTTAAAATTCAAACCTATTCTAGCCATTGGTATATAAGGCTTAGAATAGGTTTTTGTTATGTGTTTATTAAAAAACGTAATTACTTGGAAAACTTTCTATAAAACCTTGTAAAATCAATGGATATATGCTATTCTTAGAACTAAGGAATGGCTATTTTACTATG # Right flank : GAATTATTGATTATAATAAAAAATAAAAATAGGAGTATTTAAATTTTTACATTTGTAGTGTTGCAAAGTACATTGTTTTTATAACATGCATTGAGATTTCTAATATATAATAATTAGGATTTTTAAACGTTAAGATTTATTTAACTAATAAAACCTGTATATTGTTTATTGTAAGTAAAACCGTAACATCAATATGTATTTAAATTTGCAATTATAAAATAAATATATACAGGTTTTCAAAAAAATACAAAAAGGTATTGTAGTATAATCTGATTACTATTATAATTTTATTAAAGAAATAAATAACGTCATTGCAATTATAAAATAATTATAATAAATAATAAGATATTAACTAACAAAAGAAAATAAAAAAGAGGTGATAATAGGAGGGTGAAAAACTATGCTAAGAAATCCAAAACAAGAATTACAACAAGTAGTTAAGTTTGCTAAGAAAGGAGATAAAAAGGCTAAAGAAAATATATTGATGAGATTTAAACCAT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAATAGTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 16640-16867 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJHKK010000025.1 Clostridium botulinum strain SCPM-O-B-8707 NODE_25_length_25605_cov_43.363686, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 16640 30 100.0 36 .............................. TCCTCCATATCTCACATATCCTTTCTAAAACATTTC 16706 30 100.0 36 .............................. AAAGTAAGTTTACTCTAGGTTGTCGAACTGTTCCCA 16772 30 100.0 36 .............................. TACATTTTCATAAATCCAGTTGCCACTTTATTAACA 16838 30 96.7 0 ......T....................... | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 99.2 36 GTTGAACAATAACATGAGATGTATTTAAAT # Left flank : GCATGGCATCAATTTTATCATAGGCATAGGTTAATCCAATAGTTAAAAAAAGTTCTGCGGTTATATCAGAATGAGTAAGGGTGTAGCGTCTTCCTAAAATAGGTTCTGTATTAGTTACTCCATCTCTAAATTCCACTGAAAGTTTTTCAGGGTTCAATTTGCTCATTTAATCCCTTCCTGTACAATATTTCTCATAGGACTATTATACGATTAGGTTAAGGAAGTTGTCATTTAGGTAGCTATAAAATCTATTATAATATCATTAGCGCTATATAAATTTATAAAAAGAATATTGAAATAAATAAAAGAAAAGAACAAAAACTTTTTCCAATCGACTTTAAGTTGAAAATTTATCGAAATCATTGATATATAAGGGTTTAGGTTAGGTTTTTTATGTAAATTTGAAAATACCCTAATCAGTTGGAAATTTTTATTTATAACCTTGTAAAGTCAATGGTTCTATGATATTCTTAAAATTAAGGAATGGCTATTTTACTATG # Right flank : TTCATATTCCCATTCATCTTTGCAATCTTTTCTCTTAGTTGAACATTAATATAGATGAAAAGCCACCCTTAATAATTAAATATATGGGTGGCATAGTTGTATTTAATTTATATACGAAACGATTGTAAATAGTTTTGTATGTCTTCTTCAGAAGTATTGAGCAAATCAGTAAGCATCCTTTGAATAGAGTGCAGGGTTTTAATTCTCTCTTCAATTTCGCAGATTTTATTCTTTACCAATCCTTTTAAATTCTCTCCATCCATTTCTTGGCTGAGCATTTTCAGTATTTCTTTGATTTCTTTTAACGAATATCCTAATGATTTAGCATCTTTGATGAATTTAATTTTCACAAGATAATCATCTGTGTAGATTCGATAACCATTGGCTATCCGCTTTGGGGCAGGCAAGATGCCACTATCTTCATAGTAGCGTATAGTTGATGTACTTATCCCAGTTTGCCTTGCTAGTTCACCGCGTGTCATTTTGTTCACTTATATTAC # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 2 19605-20027 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJHKK010000025.1 Clostridium botulinum strain SCPM-O-B-8707 NODE_25_length_25605_cov_43.363686, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 19605 30 100.0 35 .............................. CGTTTTTTTGTTGCAGGTTTTATTAAAAGTAATAG 19670 30 100.0 34 .............................. AATTAAAAACAATAAATTTTCATTAAAGGATAGT 19734 30 100.0 37 .............................. GTTTTAAGTCCTCTCGCTTCTTTTCTTGCAGCTCTTG 19801 30 100.0 36 .............................. AACTGGTAATAATCTAAGATTAAGTATAGAAACTAT 19867 30 100.0 36 .............................. TTTCTAAAAGTTTTAGTATTAAACCTTTTTTCTTTT 19933 30 96.7 35 ...G.......................... TTATGATATGATTTTATTTGTTTAAGAGTATCTGC 19998 30 96.7 0 ...G.......................... | ========== ====== ====== ====== ============================== ===================================== ================== 7 30 99.1 36 GTTAAACATTAACATGAGATGTATTTAAAT # Left flank : GAATATTTATGGTGTCAGATATTGTGCGTCCATTATGTAGTTTTTCCAGGTAAATTAAAAAATAAAAGTAATGTAAACTCAATCATATTAGTGGTTTATATAGGATTTTTTATAGAAATTTCTATTTTATAAAATCATCTGGAAAGCTTTCTGGAAAATCTTGATATTTCAATGGGGGTGTGCTATTTTTAATTTTAAGGAATATTGATTTTACAGTGGTTGAACCTTAACATAGGATGTATTTAAGCAGGGAACTCAAATTTACAATTTGGTGTGAGTCACTTACTCCTTGGAGAATAAGAGAAGGAGTTTTATAAATTGAATCTTTCCAGGCGTAACAAATTTTAAAACCTATTCTAGTCGTTGATATATAAGGCTCAGGATAGGTTTTATTTTATATTTATTAAAAAACGTAATCACTTGGAAACCTTTCTATAAAACCTTGCAAAATCAATGGTTGTATGATATTCTTAAAAACAAGGAATGGCTATTTTACTATG # Right flank : TACTATATCTCCTCTTGTAGCGGGAGTTCCTATACCTGTTGAACATTTAAGTTCCTTTTAGGTGCAATTCTTTTTGGGTTGTTGACTTGTTAGTCTAAAGCTACACCATAAGAAGGTTCATTAACACATGTGGAAGAACAGGTAATAGATACAGCGCTTGCTATTGATATGGTGAATTGTATTACAAATAACGAAGGTTTTATTTAAAACTGTTCATATGGCTGGATTTAAGAAATATAATAGTGTTCTAAGTTGTATCATAACCTAAGTAAATTATAAGAATATATGGTTATATTTATTTTAAGACTATTGTATTAATATGATTCATCCAGATTTAATTGTGAGAAATTTCATTATAAACTTAATAGGGACGTCTTAGATTTTTTATTGCATGAGATTGTACGGAAAATATTAATTTTCACTATAACTTAACAAATGATTGATACAATTTTAAAAAAATCAGGACTTACAATGATAAAGTAGGTCCTGATTTTTATTAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAAACATTAACATGAGATGTATTTAAAT # Alternate repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 3 24665-25042 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJHKK010000025.1 Clostridium botulinum strain SCPM-O-B-8707 NODE_25_length_25605_cov_43.363686, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ========================================================================================================================== ================== 24665 28 100.0 39 ............................ ATATAAATAAGTACTTGGGTTTATCTTCTTTTTTTGTAT 24732 28 100.0 38 ............................ ATTAATCTATGAAATAAGCTATTATGTTATTTATTAAT 24798 28 100.0 39 ............................ ATATGTAGTTTTCCAATTCTTTTAATGATTTTGATCTAT 24865 28 96.4 122 ................G........... GCAGGGCCCCAAGTCTTTGATTTGGTGTGAATCGATTACTACTTGGAGATCAGGAGTAGGAGTAGGAGTTTCATAAAAAATTAAAGATTTATAGTTTTTAAAGTTAAGTATGATCTTCAAGT 25015 27 75.0 0 T.........-.TT....T.A..G.... | C [25032] ========== ====== ====== ====== ============================ ========================================================================================================================== ================== 5 28 94.3 60 GTTGAACATTAACATAAGATGTATTTAA # Left flank : GGACCTGGGATAATCAAGGAAACGTTGAGGATGTTGCAACAGGAAGTGCAGCTGGACCATTAGGTGCATATTTATATAAGCATAATATTTTTAATGTAGGTCATGAGATTATAATAAATCAAGGAAGATTTGTCGGCAGACCTAGTAAAATTAAGGTTTCTATGAGCATTTCTGAAAAAGAAATATTAGTGTCTGGAGAGGTAGCTATTTTGGCAAAGGGAACTATTTTACTATAATAATAAACGTAAAAAATCGCATTATTCAAGAAATTGAATTTGCGATTTTTTATTGCGCAATCCAAATATATTGTAAAGTTAACTGAATTTTTTCAGCCAAAATAAATTTTAAAACCTATTTAGAGCGTTGACACATAAGGCTTATGGTAAGTTTTTATTTTATATTTGTAAAAAGCAAAACTACTTGGAAAAATTTCTTTAAAATCTTGTAAAATCAATGGTTGTATGATATCCTTGAAATTAAAGAATGGCTATTTTACTATG # Right flank : AATTTGTGGTTAAAGAGAACTCTTATTCCTTTAAGTATAGGATTAGGAGTTTTTTATTTTAATCTTAATTTAATTTAATTATAGTTTTGCCATATATTAAAGATACATTGAAAGTAAGTTAAGTTTTTTATCTGTATCTTCTTTATATGTTTAAATACATTATTCTATGGTAATATAATAGGATAAGGAGAGTGAAAGTTATATGAAAAAGAGATTTAATGTAACTGGAACCTGTATACCAGAGAAGCATTATATGGTAGATATATCTAAAAAGCTAGATAGCATATTAAAATTAATAGATAATGAAGAGTATTTTATTATAAATAGACCAAGACAGTATGGAAAAACAACTACATTATATATGTTAGAAAAAAGATTAAATAAAATGGAAGAGTATTTACCTATAAAAATAAGTTTTGAAGCCATAGATACGGAAGGATATAGTGAGGCTAAAAAATTTTTAAGTAGCATAATGATGCAAATAATAAATTACTTTAGAT # Questionable array : NO Score: 3.30 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:-2.46, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATAAGATGTATTTAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:78.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //