Array 1 55703-64097 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFLRH010000024.1 Desulfitobacterium sp. PLL0 L1_ctg0017, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ========================================================= ================== 55703 33 100.0 34 ................................. CCTTCGCCAACTACATCACCTCCAATCAAGGCAA 55770 33 97.0 33 ................................G GCGCCCAAACCTCTGGGCTAAGTCATCACCATA 55836 33 97.0 33 ................................T TTCACGGGCTCGAACACCTTCACGGCTAGCTTG 55902 33 97.0 33 ................................C TCCCAGGTGTACCAGGAACGCCCAGTTTTTACA 55968 33 97.0 35 ................................T ACACTTGCACTCATTTCAGCAAGTGTGCTAGAATC 56036 33 97.0 34 ................................C GCTGTGATGTTGCCAGCACAAGCATACCAGGTTC 56103 33 100.0 35 ................................. TTGTTCCACTCTCTTCCTGGGCCTAAATATCACAA 56171 33 97.0 34 ................................C GGCGCTATCTTCTCCAGGTCGCGCCAGTCTCCCC 56238 33 97.0 34 ................................T TTTCGAGCTCTTCAGTGCTTTGATCATGGAGATC 56305 33 100.0 35 ................................. TCCGCTGCCGGGGAGTGGTTGGCGGGCGCATGCAG 56373 33 97.0 34 ................................C GTACGGTCTTCGGCATAAAACACACTCAACAATT 56440 33 97.0 32 ................................C TGCCAGAAGCTTTTGGGTAAGCACGCCATCAA 56505 33 100.0 34 ................................. TGATGACCAGCATTCGCTCATCATAACCAAGTGC 56572 33 100.0 35 ................................. TTTTATATTCAGGGTAAATTTTCCTGTTGTCCCGC 56640 33 97.0 33 ................................C CTTATGGCCATGGCGAGAAGTCAGCCTTACTTG 56706 33 97.0 33 ................................C TGTGGACCCGGTTTCCAGCCGTTCTCCATCGAC 56772 33 97.0 33 ................................T TGCACCCACGGTGGGATCTGTCTTAATCAGCTC 56838 33 97.0 34 ................................C CGGCTGACGTCGCAAAAGATAAGCTCAGCCCCCA 56905 33 100.0 33 ................................. GGCCGAACTTCTCATTGAGCGCCATTAGGTTAA 56971 33 97.0 33 ................................T TAATCTTTGCCTTGCTGGCCCCACAGGTGCATT 57037 33 100.0 33 ................................. GATTATTGGTGTTGGGAATCAGCTTGCCGATCT 57103 33 100.0 33 ................................. TCATATTGATGGAACCAAACATAACCATGATCT 57169 33 97.0 34 ................................T GCTCCGGGATCCGTACTTGGCTGAGTGCATGGAA 57236 33 97.0 34 ....................A............ AATTCTCAGTTAATAACAACATCGTAATTGGAAC 57303 33 97.0 33 ................................G TGAGAAAGAGTATCATTTTTTTGTTAGTATTAA 57369 33 97.0 33 ................................C TTAATGTTTCAACATAATCAACAGATTGAAGTA 57435 33 97.0 34 ................................T TCCTTGGCACCGATTCTGCGAACAAACTCACTTT 57502 33 100.0 35 ................................. GAAGGCGTTGAATCCACTGTAGCGGCCACGGATTA 57570 33 97.0 36 ................................T TTACCATGATGGGGAAAAAGTGAAGATTGCCCGCGG 57639 33 97.0 33 ................................T GTAGCGCTGGGGACGGAAGTCGATGCCGTCGCG 57705 33 97.0 33 ................................G AAAATGCTTGGGCACGGCAGGGACCAGTCAATA 57771 33 97.0 33 ................................C TCTCTTGTAATATTAAAGAAACACTCCATTTTT 57837 33 97.0 35 ................................T TACCCGGCGGAAAGGGAAACAGCAATATGGTTACG 57905 33 100.0 34 ................................. ATAGCCTCCACCGCTTCAAGGAGGCGGATATCCC 57972 33 97.0 34 ................................T TCAGTAGATAACTGCTCCATGCGGTTTTTTATTT 58039 33 100.0 34 ................................. GGGAATGTTGACCTTGGCTGATGGGGATGAGGTT 58106 33 100.0 36 ................................. TAATAATATCGGCGTTGTCCAGTCATTGGCTCCGTC 58175 33 97.0 33 ................................C TCTTAGAGAATACAGGGTTAAAAGAAATGGACA 58241 33 97.0 34 ................................C GCTTGGTTTTTGTGAGCATTTCGCGCGTGATATA 58308 33 97.0 33 ................................G AAAAGAATAAGGCTACCGCGCTGGAAATGCTGG 58374 33 97.0 33 ................................C CTTTAACCCCAAATGTAAAATTCGCAACCTTAA 58440 33 97.0 33 ................................T ACGTTGACACGGATGAGCATACCGTGCAGAATA 58506 33 97.0 34 ................................C TGGTGGCGCTGATTGCTGGGGCTGCGCACGATTA 58573 33 100.0 34 ................................. GGACTCTCGGTGGATTTGGCGGAATGCTCTCAAA 58640 33 97.0 34 ................................C TGGACATATAAGGCCCCCTGGTTAGCGCCGTTAA 58707 33 100.0 32 ................................. TTAGCTTTCTTAAAGCGTTTAAACATTTCAAG 58772 33 97.0 34 ................................G CTGATTATCATGGTGGTTATGCGGTCGCACTACA 58839 33 97.0 34 ................................T TGTTTCTCAAAAGCCGATAAACAAGTTACGCCTA 58906 33 97.0 35 ................................G TTCGTAAGGTTGAACCTGTGCCCCTCAAGCGCCGT 58974 33 100.0 35 ................................. CGAGATAAAAGAATATGAGATGTATCTTGATGAAG 59042 33 97.0 34 ................................T GTATCAAGGTATCATTACCGCTTTGACCGTGGTG 59109 33 100.0 33 ................................. CTTTCGTGATATTCAAGATAGTCTTCTCTGCTG 59175 33 97.0 35 ................................G CCCTGCTGTTTTTGGCGTTCTATGGCCTGACGGAT 59243 33 100.0 33 ................................. CCAGAAAAAGCTGTGGCTTTCAATTGCGGTTTT 59309 33 97.0 32 ................................T TGTGTATTTACCTATGATCAAACTAATGTTAA 59374 33 97.0 36 ................................G GGTACGTGGAGTGCTGGTCAAAAATTAGTTGTAACA 59443 33 100.0 32 ................................. AAATTTCTCTGTCCCTTAGCAAAAGAATTAAA 59508 33 100.0 34 ................................. AAACGACAAGTGAAGAGACTTTGATCAAGCCCGT 59575 33 100.0 32 ................................. TCTTCTATGGCATTAAAGGCATTGCTGGTGTA 59640 33 100.0 32 ................................. TGTGCTCGAAAAAGTAATTACCAATCCTACGC 59705 33 97.0 34 ................................C GAGTACTCCGAGAGCATCCGGATGAACTGGCCAG 59772 33 97.0 35 ................................C CTAGTTCCTTCGCAATCTGCCAGTCTTTGCAGTAG 59840 33 100.0 33 ................................. ATGCGCAAAAAGTCAACGAGCGAATAGCGGCAA 59906 33 97.0 34 ................................G CGAATGACGAGTGGATAACGCGTCGGAGTAAAGT 59973 33 97.0 36 ................................T GGTTTTGTTGTACTCCCGGTTGAGCGGGATCATATC 60042 33 97.0 35 ................................T GAGATGGTAGTGCATCTTTCGGACTATGTGGCATC 60110 33 100.0 33 ................................. AGAGTCCGCAGAAGCAATGAGGGAGGCTTTAGA 60176 33 100.0 33 ................................. AAAGCCTTGTGCACCATCTGATTCGAGGACCGG 60242 33 97.0 33 ................................G TTTTCGATGCGCTGTGAGCGGGTTTTGTTGTAC 60308 33 97.0 33 ................................T TCGAGCAACCACATACCCTACACCTCCCCTTGT 60374 33 97.0 34 ................................T TAGGGTTAATCTATACATAGCGACCGGAGGGACC 60441 33 97.0 34 ................................T TAGGGTTAATCTATACATAGCGACCGGAGGGACC 60508 33 97.0 35 ................................T CTCGGACTTTGGCCGGAATGAATACGTATGTGCGC 60576 33 97.0 33 ................................C TTTACATTTGGACAATACCCATTATAATTACAC 60642 33 97.0 33 ................................C TGTCAACCAAGTTGAGGATGAATTCCTGTCGCG 60708 33 97.0 33 ................................T TAGGTATCAAAGTGAGGGATAAAAACATGTGTA 60774 33 100.0 34 ................................. CGGCTAATTATGCAGCGTAAGCGTTGGATTCCAT 60841 33 97.0 34 ................................T GCTTTTCTTGGCAAGCGGTAAAGTACGCGCTTCG 60908 33 97.0 35 ................................T CGTTATCAACACCAGACACCATCGACGCGAAGCGC 60976 33 100.0 35 ................................. TCAATCGCTTTTCTTAATTCGTCAGACATAGGCTT 61044 33 97.0 33 ................................G GCAATCAACTTATCCAATTCTTCCCCAGGATCC 61110 33 100.0 34 ................................. TTAAAAAGACAGATGAAGATAGGATTCAATTATT 61177 33 100.0 33 ................................. AATGTACAAGAATCTCCTCTATCTTTTACTGGA 61243 33 100.0 34 ................................. AGAATTATGTGGAAAAAATATCTCACGAATATAA 61310 33 97.0 34 ................................C GCGAACAGATTGCGAAGGTTATGCATATCCCCGG 61377 33 100.0 57 ................................. TTCTATCTTTTATGGAAAAGGAACTGAATTTGCTAAAATACTTGAAGAAGAATTTGC 61467 33 97.0 34 ................................T GGGTATCAGGTGGGCCGTCCGTCGTTAAATTAAA 61534 33 100.0 34 ................................. TCTAGGCCGTCGAGAGGCAGTTTCGCCCTCTTGT 61601 33 100.0 34 ................................. GTTTAACTGTATCAGTATTATTTAAAATGTTTAA 61668 33 97.0 33 ................................T CCCCTACTTTAGAAGTAGGGGTATTCTGCTACC 61734 33 97.0 34 ................................C AATAACAGAGAAACCAAGTTTGAAACTATGCAAC 61801 33 97.0 35 ................................T TGCTAAAGAAGGTTAAATGTTCCTGCAAGCATTTC 61869 33 100.0 33 ................................. ATAACCGACCGTGCAGGGTGTGTTCCCTGCTCA 61935 33 97.0 35 ................................T GAGCATATAAGGCTTGATTTTTTCGTGAAGCTCAT 62003 33 100.0 34 ................................. AGGGATGGTTGTTGAGTGTAACAAAAATTGTAAA 62070 33 100.0 34 ................................. GTATGCCCCTGCAGCTCACAGAACATAGTATTTT 62137 33 97.0 34 ................................T GCAAGGAAGGTAATATTATGAAAATAGGCTACGA 62204 33 100.0 35 ................................. CCATGAACATATACATAAATATACAAATAAATGCA 62272 33 100.0 33 ................................. AGAAGTTTTGTTATCTTTTCGTCGAAAGTTTGG 62338 33 97.0 33 ................................G CCATGTAGCCAACTACCTATTCCATAGATAATT 62404 33 97.0 33 ................................C CCAAAGTAAAGTATTATAGTTTTTATCTCCTAA 62470 33 97.0 34 ................................C GGCTCCCTATGATGCAGTGGCCATGATCGAGAAA 62537 33 97.0 33 ................................T TCAAGCACTCTTACGGTTTCCGACCAATGAGAG 62603 33 97.0 34 ................................T CTTGATGACACCGATTTTCTACCTCTTGCCGTTG 62670 33 97.0 33 ................................T TCTAAGAAGATATGGATTATAGTTGTCCAGTCC 62736 33 97.0 34 ................................T TCCCAAAACTAAAGGAGGTGAGGACCATGCCAGG 62803 33 97.0 35 ................................T TCCAGTCCTCACCCTTGTCGATCGTAGTAGTGACA 62871 33 100.0 36 ................................. GGCCCAAATCCAAATTAACAAGAACAAAATGAGGAG 62940 33 97.0 33 ................................T CTCAGCAGAGGCCTATAGCAAACACGGCCTTAA 63006 33 97.0 35 ................................T GGGAAAAACGGCTCCTGGATGTAGTCAGAGACAAG 63074 33 97.0 35 ................................G TACAGCCAGGTGGCATGATAATGTCTCAGATCGTG 63142 33 100.0 34 ................................. CATCAATTCTATCTATAGTGCATTTCATATAAGC 63209 33 97.0 35 ................................G ACCAGTGATGCATTTCTAAGGGCTGTAGCACCAAA 63277 33 100.0 34 ................................. ACGATGTGTTTACATGCCCCGAAGCTGCAGAGAA 63344 33 100.0 31 ................................. ACGTTCCACCGCATAAGGCTTTTGAGTATGA 63408 33 97.0 33 ..........C...................... CTGGCTGAAGCGTTGCCGTGGGCCATGCTTTAC 63474 33 93.9 31 ..........C.....................C CGGTGGACAGCAGTACCTAGTCATTGACAAG 63538 33 97.0 31 ..........C...................... GGAGTAGGCGGTGGAGTGACGTATTCGTAAA 63602 33 93.9 33 ..........C.....................T GTGATGAGCAGAACGGCTTCAGCCCGGCTCATG 63668 33 93.9 31 ..........C.....................G ATTTGGACTGTTGCTCCTACGTCAAAGATCG 63732 33 97.0 33 ..........C...................... TGTTTGAGAGCTGCTTTCCGGACTACGGCGCAG 63798 33 93.9 33 ..........C.....................T TGCAAGTCAGACTGTAAGCGGCGCGGCTGACCT 63864 33 97.0 33 ................................T CAGATCTGGCGTAGACATTGTGACGGTGGCTGC 63930 33 100.0 34 ................................. AAGAATCAACCCATCATGCTATTTATCGGGTTAG 63997 33 97.0 35 ................................G GAATACTTTCGCATAACAAGCAAATTCGCGCCCGG 64065 33 97.0 0 ................................T | ========== ====== ====== ====== ================================= ========================================================= ================== 126 33 97.9 34 GTCGCACCCCTCGCGGGTGCGTGGATTGAAACA # Left flank : TCCACCTTTTGTCTGGAAATAAGGGAGGTAAGCTGCAATGATGGTGCTAATTACGTATGATGTGAACACCACATCAGAAGCTGGGAAGAAAAGACTCAGGCAGGTTGCCAAGCAATGTGTCAATTACGGGCAAAGAGTACAAAATTCCGTTTTCGAATGTCTTGTCGACCCTGCCCAGTTTGCCCAGCTAAAAAACAAGTTGGAGGGGATAATAGATTCAGAGGTAGACAGCTTGAGATACTACTTCTTAGGGAGTAACTGGAAAAGAAGAGTAGAACATGTAGGTGCAAAAACAACGTTTGATCCAGAAGGAGTGATAATCGTTTAAGTGAAGTGCGAACCTCATGTGAACATGATTTGCTGAGGGTATCGCATGCGGCTTGAATAGCTGCTTTTTGTGCAAAAACCGACTCTTTTGGAAGAGCCTGAAGTTATCAAAGCTAGGGTTCGCGAAGATAAGAACCTTAGCTATTGATATAGCCTGCTTTTTTGCAGGTGCT # Right flank : TCCTTTGTTTGAGTTCTAAGCCATCAAGAGGAGTCATACACCACTCAGATCGTGGGAGCCAGTACGCAAGTCATGCATACCAAGATATCCTAGAAGAGATGATCTAGGTGAGACCCAGGCAAAGGATCTTTTTGCAAGGATTAATACTTCTTCTGATAAGACCTTTGAAATACCCGCAGTATTATTAGTCATTGAATTATCCCCAATTCCATGCTATTCTAAGCTTAAGGAAATTATTGGAACAAGGGAGGGCTGATCGTGGGGACGTCTCCGTATTTAGCAGGGCACTTAAAGAGAATAGCGGAGGAAGAAGCAAGGACGCAGGAGCGTTTGAGAGTTGCTCAGGCTAAGGCGGAACAAATTGCAATGGTCCTGCGTAAAGAATTCCCTGGCGTGGAAGTCGTGCTGTTCGGTTCGCTGGCTACTGGACAGTTCGAGCTAGATTCGGATATTGATTTGGCAGTGAAAGGACTCCCCGAAGAGCATTACCTCAAAGCTTA # Questionable array : NO Score: 5.57 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.00, 8:1, 9:0.42, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCTCGCGGGTGCGTGGATTGAAACA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACCCCTCGCGGGTGCGTGGATTGAAATA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,1.15 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //