Array 1 7890-7525 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRAE01000054.1 Tepidibacter formicigenes DSM 15518, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================== ================== 7889 30 100.0 35 .............................. TCAATTTCAGTAATTTTGCCACTTTGTTTAAATAC 7824 30 100.0 36 .............................. CTCGCATTTATAAGACTATTTAAAAAAATATCTTCT 7758 30 100.0 36 .............................. TTTGTAGTAGTAAATTCAAGCGAACGCAAACATTTT 7692 30 100.0 42 .............................. GTATGAAAATAAAAAAGAAGAATTATTTGATAATTTAGGTAA 7620 30 100.0 36 .............................. CTTTAGAGTCTTCTAATATTTCTGTTATGTTTATAT 7554 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ========================================== ================== 6 30 100.0 37 GTAGAACCTTAACATTAGATGTATTTAAAC # Left flank : AGACCATTTAGTATGAAGGAGATGGTTTAAGCCATGGCGAGAAATTACAATTATAATTATGCTTTTGTTTTTTATGATGTAGGAGAAAAGAGGGTTAATAAGGTATTTAAAATATGTAAAAAATATTTTCATCATCATCAAAATTCTGTTTTTAGAGGTCCGATTACACCATCTAATTTAATAAAGCTTAAATCTGATATAAAAAAGGTGATAGATGAATCACATGATTTTGTATCAATTATAAAACTTTTAAACAAAGAAAGCTTTGATGAAGAAACTTTAGGGATAAAAAGAAAGGATACTGAAGCATTAATATTATGATATTTTACCAACCTAAAATTTGAATAAAATCTATAGATATATTGAAAAATAAAGATTTACAAGGGGCAAATATAAGAGCTATAATTATAAGTGTAGAGGTTGGGAAAAAATTAATAAAATTGTGTTATTATAAAGGGTTAAAGCTATTTAGCGCTTTTAAAAATGTGTATTTTTCAGAG # Right flank : ACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGAACCTTAACATTAGATGTATTTAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [5.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 58318-57623 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRAE01000011.1 Tepidibacter formicigenes DSM 15518, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 58317 37 100.0 35 ..................................... TTGCGTTTATTGTAATAGCTTTTGATTATTTGTTT 58245 37 100.0 38 ..................................... AGTATCTTCTTAATTCCTTGTCGTTGATAAAATCACCT 58170 37 100.0 35 ..................................... TATCATACGTTCTTATATCACCTACCTCTCTGTGG 58098 37 100.0 36 ..................................... TATTTTTATTAATTCAAGGAGGTAATATCATGACAT 58025 37 100.0 36 ..................................... ATTCCATTACCAAATGGAAATGAAGTTCCTAAATTT 57952 37 100.0 38 ..................................... TAAACGCTTAAAAACGTTTATAATTAAAATATAGAGAA 57877 37 100.0 39 ..................................... CAAAATCATTTCCATTTTTCCACCTTGAATATGCTTCTT 57801 37 100.0 34 ..................................... TTAGTACCTAAGGCAATACTTACAGCTGGAGAGG 57730 37 100.0 34 ..................................... TTAGTACCTAAGGCAATACTTACAGCTGGAGAGG 57659 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 10 37 100.0 36 ATTTAAGAGATACATCCATTAAAACAAGGATTGAAAC # Left flank : AAAATATTAAAAATTTAAATTTATAAAAGATCAATGGTATGAAATAAAAGTGAGAGAAGAAAATCTCATTTTAATATGGAAAGAAGTGAAATGGTTAAAAAAGTATGAAATACATTGATGAAATAAATTATTTTTATATATTTGAAGCTAAAGCAGGAAACTTTATAATTGCTTATAAAGGAACTATATGGTAAAATATTACTTGATTTATAGGAACATATATACAATAAAGGTAATTGAAAATATTTATAAATTAACAATTTAATGTCAAAAATATAAATATAAAAATTCAAGTTATTTTTGTTCCTATAAAAATATTTATAAATTTGGGGTAATAGTTTTAAAATATGGTTATTTCAATAGTTGTAGCTGTTGTTACTACTGTGAAAAACAAATAAAAATTTTATTTTATGACTTAAAAAAATGAATTTTGACAAATTTTATATCCGTCAAAAAAAGTTTAAGAATAAGTTATTTCAATATATTTGCAAAAAAGGGCT # Right flank : TTCCCCTTCTTACTCCTGAAGCAAAGAATATTCTTTGCTTGCTTTTTGTATTTAAATACAAATTCACAATAAATAATGGAATAAATATCCATAAAATTAATCATAATGTAAATAAATAAACAAAAAAGGAGGTATTTAAATGAAATTGATAATAAATACACCTGGAACATATGTATCTAAAGTTGGAGAATGCTTTCAAGTAAAAAATGATAAAATCAAACAACAATACTCTGCTAGAAAAGTAGAGCAGATAATAATGACAACAAGAAGCGCATTAACTACCGATGCAATAGAACTTGCTATTGAAAACAATATAGATATAGTATTTTTAAAAAGCACGGGAAAACCACTTGCAAGGGTATGGCATTCAAAACTAGGGAGCATAAGCACTATAAGAAGAAAACAATTATTTCTACAAGATAATGCTATGGGCTTAGAATTAGTAAAAGAGTGGATAACACAAAAAATGCAAAATCAAATATCTCATTTAAATAAGTTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAGAGATACATCCATTAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.00,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : NA //