Array 1 4441-10996 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABWTF010000025.1 Desulfuromonas acetoxidans strain DSM 1675 assembly_contig_25, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 4441 29 100.0 32 ............................. TTGATGACTTTGTTTGTCCAAGATGAAAAAAC 4502 29 100.0 32 ............................. AGATAGTGAAATTGCTGTCGTCTGAAATAGCT 4563 29 100.0 32 ............................. CATCCTACGAGTTACAACGCAGCTTAGGCATA 4624 29 100.0 32 ............................. ACACATTTACCTTCACCGACGAAGAGCGCGCC 4685 29 100.0 32 ............................. AACTGTTTTACGGATCACTGGTCGAAAGCCTC 4746 29 96.6 32 ...................A......... TGGCTGGAGGGCATCGGCTTTGCGCCTGACCC 4807 29 100.0 32 ............................. GCATTGCCAATGCCGCAGCAGACAGCACCGGG 4868 29 100.0 32 ............................. TTTTTTGGATTCTGTACGGAGGTAACGACCCC 4929 29 96.6 32 ............................A TCAGCACCGTGGTGGTGGCCGATGCGGAAGCC 4990 29 100.0 32 ............................. GCGAAGCCGGGTACCAGGATGCGCTCGACGAC 5051 29 100.0 32 ............................. CCCGTAATCGTGATGGACAAGGCAAAGACGGT 5112 29 96.6 32 ............................T GGGGTAGCGGTGGCAAGAAAGCGGTATTTTAC 5173 29 100.0 32 ............................. CCCAATATCAATGGCGGCTTGGATTTCTGACA 5234 29 100.0 32 ............................. TTGACGTTGAGATAACTACTGACCGCGCCTTG 5295 29 100.0 32 ............................. ATGCATTAAAGGCTGTCGTAAACGAGTGGGCA 5356 29 100.0 32 ............................. TCTCAACAGCCTTAAGCGTGGCTGAAAATTCA 5417 29 100.0 32 ............................. GAAGCTGTGCAGGTGGCGGCTATGGGGCTTAA 5478 29 100.0 32 ............................. CGATAGTCAACTGAAGTTTGCACAGGACTATA 5539 29 100.0 32 ............................. TTCTTCCGTAACAATCAAAATAGCTCTGACAG 5600 29 100.0 32 ............................. ATTGAGGCGCAACAGCTTCGGTTTGCACAGAC 5661 29 100.0 32 ............................. AAATAGCGCAGAACGTCGCCGCCATGCGAGCC 5722 29 100.0 32 ............................. CTAACCCCCTGCATCCTGACCAGCGGGGCAAA 5783 29 100.0 32 ............................. TACCTGTATCAACTTTGGGGATCTCCAGAACT 5844 29 100.0 32 ............................. TCTGGCATTGCGCTAAACGATACGCTACAGTT 5905 29 100.0 32 ............................. CGCCCGATGAAGGAAAAGAGGAGACCGAAGAA 5966 29 100.0 32 ............................. GTCTATCTCTTGCCCGCTATCCTTCCGCGTGG 6027 29 100.0 32 ............................. TTGGCAACGCTTGGCTGGGCGGGGGCGTTGGG 6088 29 100.0 32 ............................. ACCTGCTGTAATTAAATATAGGAATTTTTGCG 6149 29 100.0 32 ............................. CGGTTAGCCATTTTCTTCATCCTCCATGCTGG 6210 29 100.0 32 ............................. CACAAAAGAGGCGCTTAAAATGGAAATTCAAG 6271 29 100.0 32 ............................. CTCTCTGCTAGTTTCAACGCCTGTCCGCTGCC 6332 29 100.0 32 ............................. AAGACAAACAGCACCAAAATGAATCTGGAATA 6393 29 100.0 32 ............................. ATAGGGAGGCGCGCCAAGTTGGAATCGCAAAC 6454 29 100.0 32 ............................. AAAAAACGTGCAGAGATGGATGGACAACCACA 6515 29 100.0 32 ............................. TCCCTGCATTTCTGGCAGTATTCGCACTCGCG 6576 29 100.0 32 ............................. ATGACTGAGCAACTTCTTCCAACCGTCAACAC 6637 29 100.0 32 ............................. AAGTATTCTGGACCTCAACACCGGAGCCAGTA 6698 29 100.0 32 ............................. TGATTCTCCCGGCCAATCTCTGGCGGTGTTTC 6759 29 100.0 32 ............................. TTGCGGTTTGGCATCAAGAGCGGCACCGACTG 6820 29 100.0 32 ............................. CACTCTTCGAAACCCCGGCGAAGATCGTCGCG 6881 29 100.0 32 ............................. CCCCGGAGCGATCCGGGGCCGTTGTGTTAATA 6942 29 100.0 32 ............................. GGATATAGCGGAAATCCATCAGTACATCAGGG 7003 29 100.0 32 ............................. GCACGGATAATGCTGTACTCCTGATCTTCACG 7064 29 100.0 32 ............................. TATGGAGTGGAACCAGGGTCAATTTCTTATGA 7125 29 100.0 32 ............................. GCCTGCAGCCAGCAGGATGTCATCAAACACGT 7186 29 100.0 32 ............................. TTTTTCCGGTAGCTCAATTACCAGTTCATCAA 7247 29 100.0 32 ............................. TTGATGTTGATTGACCCTCCACCACCACCCGA 7308 29 100.0 32 ............................. GATTAACTCGGGCGCAAGAGCTTGAGGCAGGG 7369 29 100.0 32 ............................. GCGTCATGGAGAACTGTTAGATTCGAAGGTAT 7430 29 100.0 32 ............................. ATACGCTAAACACTGCGATTGAGTATGCTGGT 7491 29 100.0 32 ............................. TAAAATAGGGCCAGCACTTGCGCTTGCAGGTG 7552 29 100.0 32 ............................. TAGGTATAGATGTAGTTAGTAGCGCAACGCCA 7613 29 100.0 32 ............................. TAACTCCGTCAACAGTAACCTCAACCTCGACA 7674 29 100.0 32 ............................. GTACGGCAAGCAAGGCGGGCGCCGCAACAAAG 7735 29 100.0 32 ............................. GTCTGTCATTACTGGCTTTCTTGCCTCCTTTT 7796 29 100.0 32 ............................. CCATCCCGTGATCTCTTGCTCTAATATAGTCA 7857 29 100.0 32 ............................. GATCATTTTAAGGGCGCGCCTGGTGCTGTATC 7918 29 100.0 32 ............................. CCGCCAGTTCCAGAGTGGTCAAAGGACGGTGC 7979 29 100.0 32 ............................. TATTGGTTAGGTTTGGACCTGCCGCTTTGCCG 8040 29 100.0 32 ............................. AGCGCGAAAAGAGTTCACAGACGAACAGGTTA 8101 29 100.0 32 ............................. GTAGGTGTTGCAATGATCCACCCTGAAAACGT 8162 29 100.0 32 ............................. TGGTACGATGCCTCAGCATCACAGCGGTGGTA 8223 29 100.0 32 ............................. CTTTTCACCCCACCAGATACCACCCAAATTAA 8284 29 100.0 32 ............................. ATGATCCTGATTCCGGTGCTGTTCAGGTTGCT 8345 29 100.0 32 ............................. TGGATGGCGTTCACGTTGCGTTATCCTGAGCA 8406 29 100.0 32 ............................. TTACTCAGGTCAACGGCTGTCATCAAATAGTT 8467 29 100.0 32 ............................. CGGAGATGCTTTGTGTGTTCCCACTTGCGAGC 8528 29 100.0 32 ............................. ACACCATCCTCTGATCCGATTGGGCTGACTGA 8589 29 100.0 32 ............................. AAATTTAGTTCTTCTGCTCTGTCGATAACGTC 8650 29 100.0 32 ............................. TGTTCTTCACAGCAGTAGCCTTTATCTCCACA 8711 29 100.0 32 ............................. GAGCCTAAACAGATGAGCGCAACAGCACACGA 8772 29 100.0 32 ............................. GCTCAATTGTTTGTGCGACCAGATAGCTTGGT 8833 29 100.0 32 ............................. TTTTGAGTGGTAACCCTTCACATCTTGATAAG 8894 29 100.0 32 ............................. CATTCGAAGTGCCATAATCTATTGAACATCCA 8955 29 100.0 32 ............................. CTATCATCCTTTGTTGGCGTCTTTGTTCTCAA 9016 29 100.0 32 ............................. GCTCAATTGTTTGTGCGACCAGATAGCTTGGT 9077 29 100.0 32 ............................. AATAAAACGTGCGTCCTCTTTAGGGATTCCGC 9138 29 100.0 32 ............................. TTCTTGCTGTTTAGGTAAACCTCTATGCCTTT 9199 29 100.0 32 ............................. TCTGACATATCAATACTCCTTATTCTGGTAAA 9260 29 100.0 32 ............................. TGGGACTACTACCAGGAATTCACCAAATTTCA 9321 29 100.0 32 ............................. CTTGAACAAGAAAAAGCAGAGCTTGCACGTCT 9382 29 100.0 32 ............................. GTTTTCCCAGACCTAAATAGCATCCGACGCGA 9443 29 100.0 32 ............................. CTCGTTGACCTTTTTTATCACGGCAGACAGGT 9504 29 100.0 32 ............................. TTCACAACAATGCCAGCCCCAGACACGCGAGC 9565 29 100.0 32 ............................. GGGGCCGACCATGACCCTGAAGCTATGTCCGT 9626 29 100.0 32 ............................. CTTGGTGCCGATGACGGCATCAACGCTGTCGA 9687 29 100.0 32 ............................. ATTGAGGATGCCACGCAGCGCGGCTTTAATGC 9748 29 100.0 32 ............................. TCGTCACGCTCCTTGACAACCTCATCGAATAA 9809 29 100.0 32 ............................. ACGTGCGGCAATTTTCATACCGCTTGTCATGG 9870 29 100.0 32 ............................. CTCATCAACCTTTTTATTGACAAAATCACGTC 9931 29 100.0 32 ............................. GCGGTCATTTTGCTGTCGTCTCTCCGGTGGTC 9992 29 100.0 32 ............................. CACCTGACTGGCTAAAATCATGGACAGACTGT 10053 29 100.0 32 ............................. GTGCGATATTGCTTGCTGATTCATTGAGAGCC 10114 29 100.0 32 ............................. TCGAGGCCACCATCAACGGCAACGTGTTTAGG 10175 29 100.0 32 ............................. AGGTTTTTTTGGCGTTGCTCGAAGAATCAAAC 10236 29 100.0 32 ............................. GATTCAAAATGACCCTTTTCGGAGAAATAATC 10297 29 100.0 32 ............................. AGCGCTGAGGGTGCTTCGGTGATGGAGCAGAT 10358 29 100.0 32 ............................. AGAGCGGCCAGTGACCACGCCCAGAGGTTGCC 10419 29 100.0 32 ............................. CCGCTGGAACTCATTTTGTCGCCAAGACGATC 10480 29 96.6 32 ............A................ ATGATTGCCGGGTCGCGTCGGATGCTATTCAG 10541 29 100.0 32 ............................. GCTTAACATTCCTTTGTTACTCCTGAAAATAC 10602 29 100.0 32 ............................. GAACAAGCGCCACAGACAACTGGTATATGAAA 10663 29 100.0 32 ............................. GTAATATCCATTTTTTTACGGGTGTCGTTGCC 10724 29 100.0 32 ............................. TCCGATCACCGCCCAGATAACGGCGGAGATCG 10785 29 100.0 32 ............................. CCGCTCAAAGTGCCACGGCTTGTAATACTTCC 10846 29 100.0 32 ............................. GCAGTGGCATCTATCGGCGTATCACGCCGGAC 10907 29 100.0 32 ............................. AACTGGCTGCCCACAGGCGCACTTGTTTTTTT 10968 29 93.1 0 ...........................AA | ========== ====== ====== ====== ============================= ================================ ================== 108 29 99.8 32 ATGTTCCCCGCAGATGCGGGGATGAACCG # Left flank : CAAATTCTCGCCGCCGGAGAAGTAACCGTGCCGGGGAAACACATCGAAGCTGTTGATATGGCCATCCCCAACAAGGAAGGAATCGGTGATGCTGGTCATCGTGGTTGAAAACGCCCCGGACCGTCTGCGTGGACGATTGGCTTTATGGCTGCTGGAAGTGCGTGCCGGTGTCTATGTCGGCAAGCCGCCTCGGCGAGTACGGGATATGATTGTCGATAACGTCCATCAGGGCATCGAATCCGGGAATGCGGTTATAGCCTGGAGCACGAATACTGAAGCCGGTTTTGATTTTATCACTCTCGGTGAAAACCGCCGTATTCCAAAGGAGATGGATGGCATCAAGCTGGTGTCCTTTCTTCCGGAGGTTGAATGCCTCCCTACCGATACAAGCAAAAATGGTGGATGATTCGTGTTTCTAAAGAGATGTAGATAGCCCTTCTTTTTCTGGTAGAAAAAACAGTTCATTGAAAACTGAATAAATACGAATAGATATAAATAGT # Right flank : ACAAGTAGTGACATCGCTCGTCATTCCCTTCGTCCATGCTAAACTTGTAATAAACCATCTTACATTCCAAACCATATAAAGGAGTTGTCTATGACCCAAGAAAAGCATGATCGCATGGAAGATCTTTCGAAATGCATTCCGGTTCCGGATGACACCCAGGCGTTTATGTGTGCCCGCTGTGGCGCGGTATCATTGGATGTGGATCGTTTGTGTCAACCTTTGGGCAAAGGGTGCCGGCGTGATTGGTGTGGCACGCCGAGTTTGAAACCGCCGGAAAGCTGTCAGAATTTCCCTAATAATCTTCGTTATATCTGTGGTAAGTGCCGCAAGGTGGCTGTGAATCCGGAATTGTTGTGTGATCCGCAGCCCTATCCCGAACCGGAACAGAAGGAGGGAGCATCGTAAGGCACCTTCCGTTTTAGAAACGATGCGCCGTTGAGTTTCTTGTCAACGGCGTTTTTCTTTGGGGTGAGTCAGCCGTAGATAGGCATTTGGTAAGG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCCGCAGATGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GAGTTCCCCGCAGATGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //