Array 1 23499-22143 **** Predicted by CRISPRDetect 2.4 *** >NZ_LDUA01000022.1 Sphingomonas paucimobilis strain LCT-SP1 scaffold22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 23498 36 100.0 30 .................................... CGGTTGGCTTTACGGCCACGCCTACGCGCT 23432 36 100.0 30 .................................... TCATCGGCCTTGTCCATGACGAGTGTATTA 23366 36 100.0 30 .................................... ACACTGCCGGTTGGGACGTGGAGGACGCGG 23300 36 100.0 30 .................................... AATTCGCTGGTGCTCATCGGCGTGACACCA 23234 36 100.0 30 .................................... GCTCCCGAAGAAGCCCAGATGCTGCAATCT 23168 36 100.0 30 .................................... CGTGCGATCAAGGGCGGCAACAGGCTTTCA 23102 36 100.0 30 .................................... TGACGCTACTGGGGGCGAATGCGCCGATGT 23036 36 100.0 30 .................................... CACCCACCGGCACCCCGCCAGTAGCTGCGG 22970 36 100.0 30 .................................... TCTGCAAAGCGTGTGCGCTCTTCGTCCTTG 22904 36 100.0 30 .................................... ATCCCAGGTCGCGGCCCGGCAGCTCGGCCT 22838 36 100.0 30 .................................... CACCGCGATGGCGTTGGCCTCCTCCGGGGT 22772 36 100.0 30 .................................... TGAAGCCGGTTTCAGAATGCTAGACCTTCT 22706 36 100.0 30 .................................... ACGCTCTATTATGACCTGATCGGTACATTC 22640 36 100.0 30 .................................... ACACGAACTGACGGATGCGTCCAGCACTGG 22574 36 100.0 30 .................................... GGCCCTCCAGATGTTCGCGTTCGTCGATCA 22508 36 100.0 30 .................................... GTTCCTGTTCGCGTTCATATAAGGCGCGTA 22442 36 100.0 30 .................................... CCTCCGCGCGTCCGTAAGCCAATCCGCATA 22376 36 100.0 30 .................................... ATCCCAGATGCAGAGTCAAAAGCGGCGGTA 22310 36 100.0 30 .................................... CTTGCGGCCCCGATGGCGACCCGATCGCGC 22244 36 100.0 30 .................................... AGCGCGCGCAAGCGATGGCCGGGGCGCGCC 22178 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 21 36 100.0 30 GTTGCCGCTGGACCGCAATCTCTGAGCGGCTATGCT # Left flank : CCGGCATCGTGAACCACGATGTCATTCCCAGCGTCGTTTACACCATGCCCGAGATCGCCGGTGTCGGCCTGTCGGAAGAGGCCGCCAAAGAGCGCGGCGAGGTCAAGGTCGGCAAGTTCCCCTTCATGGCGAACAGCCGCGCCAAGACCAACCGCGACACCGACGGCTTCGTGAAGGTCATCGCCGACGCCAAGACGGACCGCGTGCTGGGCGTGTGGATCATCTCGAGCCTGGCTGGCACGATGATCGCGCAGGCGGCACAGGCGATGGAGTTCGGCGCGACGTCGGAAGACATCGCCTATACCTGCCACGCGCATCCGACCCATGCCGAGGCGCTTAAGGAAGCCGCCATGGCGGTGCAGGGCAAGCCGATCCATATCTGATCGGGTTTTGCCGGATGACGAAAGGGGCGGGCGCTGCGAAGTGCCTGCCCTTTTTGTTTGGCGGTACGCGGGAGCAATCCGAAGAACACATTATGCGCCGCCCTCTCGCACGGGGAG # Right flank : GGATGGTGGGGTATCGCGTTGATCTGCAACGACGAAATCCACCATCCGGCATAGTCAAAACGGTCGCGAAGCATCAGAACAGGGCCAGTTGGTCGGGGTTTTTGCGCGGTTGCCGGCGGGATTGGCCGGCGAAGCGGATGATATTCTCATATTGGCGGTCGGTGAAGCTCAATATGTGGATCTCGCCCTTGTCGGGCAGGTTCGCCTCGATCCGGCGTAGATAAGCTTCCATCTGCTCCTTGCCGCTGCAGAAACGGGCATAGACCGAGAACTGGCTCTTTTCGAACCCTTCGTCGAGCAGATATTGGCGGAATTTGGTGGCGGCGCGCGACTCGGACTTGGTGGTGACGGGCAGGTCGAACATCACGAAAATCCACATCAGCCGATATCCCGACAGTTGTGCCGCGCCGCTCGCGGGGATGGGCGTGGTGGCGAGACGCGGGCTCATCGCCCGATCAATCCGTCCAGGGCGGCCAGTTCCAGCGCGGAGGGGGGCGCGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCCGCTGGACCGCAATCTCTGAGCGGCTATGCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTGCCGCTGGACCGCGATCTCTGAGCGGTTATGAT with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.50,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [48.3-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [1.01,4.5 Confidence: MEDIUM] # Array family : II-C [Matched known repeat from this family], //