Array 1 152513-150409 **** Predicted by CRISPRDetect 2.4 *** >NZ_NRCL01000001.1 Aggregatibacter kilianii strain PN_649 NODE_1_length_491229_cov_78.2478, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 152512 32 100.0 33 ................................ ATTTTTGGGCGCGCATGGTGAGTAAAGATGTTG 152447 32 100.0 35 ................................ CTAACTTGTCAAACATGGCAGCGCAAGGGCGACCG 152380 32 100.0 36 ................................ CATTAGATTTAATCGTAGATATTTACAAAGCAGTAA 152312 32 100.0 35 ................................ ATAAACAGACCCGTTAGGTTCAGTGCCTTTAATTT 152245 32 100.0 35 ................................ AAGACTGGTGCGAGCATACGCGCTTTGTCACGCAC 152178 32 100.0 37 ................................ ATCGAGCGTTATTGCTTTGTGCCTGAAGGTGCATTAG 152109 32 100.0 33 ................................ ATAGAATCTGCGGATAAGTGGTTTAGTAACAGC 152044 32 100.0 35 ................................ AGGCTTTTTGATATACCGTTTAGCGGTGGCAAAAT 151977 32 100.0 34 ................................ AAATCAGCAAAACAGCAACACTATTAAAAATCCG 151911 32 100.0 35 ................................ TTTGCTAACGATTCGACCCTCGCAAGTCAAATCTT 151844 32 100.0 34 ................................ TTTGCTAACGATTCGACCCTCGCAAGTCAAATCT 151778 32 100.0 34 ................................ CTTGTCCAAGGATAATATGATTGAGTTTGCGTTT 151712 32 100.0 35 ................................ GCCGAAAAAAAATACGGCATCACAATAGATCGAAT 151645 32 100.0 36 ................................ CAGGGTCGCTATCAAACATGGAAGAAAGAGCGCTAA 151577 32 100.0 36 ................................ CACCCATTGGGCGGATACATGACATCCCAAATCGGG 151509 32 100.0 33 ................................ CTAGAATGTACAATATAACAAGCTAACTGGTCA 151444 32 100.0 35 ................................ TTCGGATATCCCCAAAAACGGACGCGCAGGCATTT 151377 32 100.0 35 ................................ CAAGTTATCGCATATCCCTTAGCCTCGAGATAATC 151310 32 100.0 34 ................................ AAACCAACGTTATTATTTGGATTTGCGCGTATAG 151244 32 100.0 37 ................................ ATTAATAAATTGAAACTGGTATCACCTAGTCTAAATG 151175 32 100.0 35 ................................ TTCTATTAGCGGCCGCATCATTTCAGGGTAGTCTT 151108 32 100.0 34 ................................ CCAGAAATTAAAATATGGATCAATGAAAGGCATA 151042 32 100.0 33 ................................ AACCTCTTATGTTGAATTTTATAAATTTGATAC 150977 32 100.0 36 ................................ ATCAAATAATCGACTATTTTGAGATGCAACGCTTAT 150909 32 100.0 35 ................................ AATTGAAGACATGCTTAAAGGTACTAATTGTGTTG 150842 32 100.0 36 ................................ GCTCGGTAGGTTATCAAAACTAATCTCAGGGCTATC 150774 32 100.0 35 ................................ TTGATAATCCTCGTTCATATCCACTGCGCCGGGAA 150707 32 93.8 35 ..........T..G.................. CTGACTGTGATGGCTCATTATGTAGCACCTGGCAG 150640 32 93.8 35 ..........T..G.................. CCCATCAGTAAGCTTATTCTGAGACAACCCATCTA 150573 32 93.8 34 ..........T..G.................. CTGACCGCACTTGATGAATTAGCAAAATAAAAAA 150507 32 96.9 35 .............T.................. ATTTCTGAATTAAACGTCATCAGGACTGATGAACG 150440 32 87.5 0 ......A...TT.G.................. | ========== ====== ====== ====== ================================ ===================================== ================== 32 32 98.9 35 GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC # Left flank : TTGATGAGATAAACCATGTTAATGCTGATTACTTATGATATTTCTTTTGACGATCCAAACGGGCAAGCGCGATTGCGCCGTATCGCAAAACATTGCTTAGATTACGGCGTGCGCGCGCAATATTCAGTATTTGAATGTGATGTCACGCCTGACCAATGGGTCGCGTTGAAAAACAAACTGTTGGAAACCTACGATCCCACATGTGACAGTCTGCGTTTTTACCATTTAGGCAGTAAGTGGCGTAATAAAGTGGAGCATCATGGGTCAAAACCGTCGGTGGATGTATTTAAAGACGTGCTTGTCATTTAGTTCGCTAACCTGTTGTTCTCATTAAAACCCTGATGGGATAGCGATACTTATTTTCTTTAACAATTTGGATGAATTAATCTATTTGTATAATGGCAATGTGGACGTTATACTGACTAAACTCCTTATCATAAAATCAGTTAGCGAAATACAGTGTTTAATCTGCTGATTTTTCTTGCTTTTTTATGTAGGGA # Right flank : AAGATGTCGAGCAAGTCGTGCTCATTTTGTGCGGTGGCAACCACCTTTGGGTGAGTATATATTTTGTCTTTACGAAAAATAAGTGATGTATAAGTTTCAAGCCTTTCTGCAAAAACGTCTGGAAAATCCACCGCACTTTTCTTTCATAAAAATAAAAAGCTGAACCTCTTTCGAGATTCAGCTTTTCTTTTTGGGTTAGATCATTTTAACAGCTCTTTTTGTTGACCTATGCTGAAATATTGTTACATTTTCGGAATTTCAACGCCTGAAGAGAGCAGGTCTTGAATATCCGATTTCAGTACATCAGCTTTTGGCCCATAAATGGCTTGAATGCCTGTGCCTTTAACAATGAAACCCATTGCGCCTGCTTGTTTCCAAGCCGCTGCATCACCCACCAGCTCAGGGTTGTGAACGGTGATACGTAAACGGGTCATACAAGCATCCACCTCGGCAATATTGCTGCGTCCACCGAGAAGATTGATGATTTGCACCACTTGTGC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.40,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //